prot_P-fluviatile_contig1.413.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.413.1
Unique Nameprot_P-fluviatile_contig1.413.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length730
Homology
BLAST of mRNA_P-fluviatile_contig1.413.1 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 3.400e-141
Identity = 302/616 (49.03%), Postives = 348/616 (56.49%), Query Frame = 0
Query:  122 RRAAVPFLVREHRPAEIMFKNMIRGAEFSDALLSLEENLDQVRKDLRVLFLGLATGGPRPYQDHRSHQWCMMRLKRLLGPAPSGR-GXXXXXXXXXEQKALDNQLAAVTIELLGAVTAAARMPHLLSG-AGFEGVKERTDKVDGGAGGHVLLSAPVVP-RVYWPRLSELRLSCGIMAGDLEGLAVCLGSLPNLQILDLRGHSYRPPPTDLVAFARELRATASSARPTAPAHSLGRLRVLILKYFKVEGVAGVAALGRALSAERFPRLEVLSVDSCRLCDEQLRALASALPGMSRTLTSLSLRSNYALSAEGVNALAEALRAGSFPGPGAGSGCTCSAPPRVDHRSADKESVEATASSSANGSEDACSTDAPAGGSGGGATPFRGSTKATTKSFPEMAPAWSIPSSLPTRPPAAXXXXXXXPASSCSPAPSYRCRWCRSIPVSSTAAVADGGDGKARTSTTAPLQIKSLDLSYSCWWNGYSRKERTGKD----GPGFPFELLLDVLREGGACPSLTSLRLEGCYLGDAAIRQLVVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGALLSGKMPPHLRMDVFCGNA---HRQLCPSMPRESIQEIVELWVEQQKAL 727
            R  ++P LVREHRPAEI FKNM+RG EFSDAL SLE N+DQVRK L VL  GL  GGPRPYQD RSH WCM+RL+RLLGP P    G         E+ A+D +LA +T+EL+G   AA  +P L+ G  G E     T   +        L A V   + YWP L EL LSCGIM GDLE L+ CLGSLP L++L L GHSYR P T LVAFAR L  +A+S  P AP     RLR L LK+F VEGV GVA LG  LSAERFPRL  LS+DSCRL D+QL ALA+ LPGMSRTL +LS RSNYALS+ GV+ALAEALRA   P      G   +A P        K     T       S  A            GAT          K  PE APAWS+PSS       +XXXXXXX  ++C P P              TAA A+     A ++  A L I+SLDLSYSCWWN   R  RTG +    G   PF  LL +L EG ACPSL SLRLEGCYLGDA++ QLV AL                              A  +GKMPP LRM VFC NA   +R+L   M  E ++E VELW E Q  L
Sbjct:   26 RHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSEDEEEGAVDTELAQLTVELMGPANAATLVPQLIHGLTGEEEGAGETPSAEEVRPAAAKLGAKVRGLKAYWPCLRELTLSCGIMRGDLEDLSACLGSLPALEVLVLAGHSYRAPQTTLVAFARALHESAAS--PAAPIRPR-RLRTLSLKHFTVEGVEGVATLGEVLSAERFPRLASLSIDSCRLGDKQLCALAAMLPGMSRTLKTLSFRSNYALSSVGVSALAEALRA---PATATDGGSATAATPT-------KPGFFPTTGCLLGRSASA------------GATTTGAGAPTAEKPLPERAPAWSVPSS-------SXXXXXXXXXTNC-PRP--------------TAAAAE-----AASAAPAHLTIESLDLSYSCWWNRPERAARTGSESSAKGGSGPFAGLLKILGEGVACPSLRSLRLEGCYLGDASVGQLVAALLNESGSCRKLRELNVNGNLFSKIGVGLFADAFFAGKMPPRLRMFVFCLNAEPSYRELRSDMAPEDMRETVELWSEHQNDL 589          
BLAST of mRNA_P-fluviatile_contig1.413.1 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.060e-81
Identity = 161/310 (51.94%), Postives = 191/310 (61.61%), Query Frame = 0
Query:    1 MRSLSPNVMQYVLQWLDLSSHLRLREASTLDRDETPRLTTTLVARHCEQARRCLEKIFTQEGGTRLHSVTLDLAAPH-GSRNSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRAAVPFLVREHRPAEIMFKNMIRGAEFSDALLSLEENLDQVRKDLRVLFLGLATGGPRPYQDHRSHQWCMMRLKRLLGPAP-SGRGXXXXXXXXXEQKALDNQLAAVTIELLGAVTAAARMPHLLSG-AGFEGVKERTDKVDGGAGGHVLLSAPVVP-RVYWPRLSELRLSCGIMAGDLEGLAVCLG 306
            MRSLSPNV++++LQWLDL+SHLRLREAST DRDETPR TTTL AR  EQARRC   IFT +  TRLHS+TLD+ AP  GS +S  G                                    RR ++P L+REHRPAEI FKNM+RG EFS+AL SLE N+DQVR+ L VL  GL  GGPRPYQD RSH WCM+RL+RLLGPAP +  G          + A++ +LA +T+EL+GA  AA  +PHL+ G  G E     T   +        L A V   + YWP L EL LSCGIM GDLE LA CLG
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCGMEPTQHLSSFNSSFSSFLDEASCAK-----------RRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEGEGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAGDTPSAEEFRPAAATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLG 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRS6_9PHAE3.400e-14149.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI43_ECTSI1.060e-8151.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 625..652
e-value: 1.6
score: 15.6
coord: 657..684
e-value: 2.2
score: 14.8
coord: 351..379
e-value: 31.0
score: 6.7
coord: 411..439
e-value: 0.81
score: 17.8
coord: 382..409
e-value: 2.6
score: 14.2
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 615..722
coord: 282..440
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 282..678
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 411..434
e-value: 0.81
score: 9.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 267..442
e-value: 7.5E-18
score: 65.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 571..693
e-value: 1.0E-8
score: 36.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4674832..4679100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.413.1mRNA_P-fluviatile_contig1.413.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4674595..4679209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.413.1 ID=prot_P-fluviatile_contig1.413.1|Name=mRNA_P-fluviatile_contig1.413.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=730bp
MRSLSPNVMQYVLQWLDLSSHLRLREASTLDRDETPRLTTTLVARHCEQA
RRCLEKIFTQEGGTRLHSVTLDLAAPHGSRNSLGGGRGGGGSRSTPPTPT
QQLSFFSSTLASFLDEESSSMRRAAVPFLVREHRPAEIMFKNMIRGAEFS
DALLSLEENLDQVRKDLRVLFLGLATGGPRPYQDHRSHQWCMMRLKRLLG
PAPSGRGGGGGASGGGEQKALDNQLAAVTIELLGAVTAAARMPHLLSGAG
FEGVKERTDKVDGGAGGHVLLSAPVVPRVYWPRLSELRLSCGIMAGDLEG
LAVCLGSLPNLQILDLRGHSYRPPPTDLVAFARELRATASSARPTAPAHS
LGRLRVLILKYFKVEGVAGVAALGRALSAERFPRLEVLSVDSCRLCDEQL
RALASALPGMSRTLTSLSLRSNYALSAEGVNALAEALRAGSFPGPGAGSG
CTCSAPPRVDHRSADKESVEATASSSANGSEDACSTDAPAGGSGGGATPF
RGSTKATTKSFPEMAPAWSIPSSLPTRPPAASPSTPPHPASSCSPAPSYR
CRWCRSIPVSSTAAVADGGDGKARTSTTAPLQIKSLDLSYSCWWNGYSRK
ERTGKDGPGFPFELLLDVLREGGACPSLTSLRLEGCYLGDAAIRQLVVAL
MSESGGCRELRVLNVNGNLFGEVGVRLIGGALLSGKMPPHLRMDVFCGNA
HRQLCPSMPRESIQEIVELWVEQQKALRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf