prot_P-fluviatile_contig1.402.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.402.1
Unique Nameprot_P-fluviatile_contig1.402.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length356
Homology
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 2.690e-161
Identity = 248/304 (81.58%), Postives = 259/304 (85.20%), Query Frame = 0
Query:    1 MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGG---AGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSG-GD-GGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLAGP 299
            MDFGEPSDDEADAGKVRVKFVTK+PSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVM+RHALSGEAVLEVEYLPALRQPTEAEHADQPDWVS +  AG GLETFVTGCYDGCLRVYG GCKV +L+KAHQ PVTALCAVPSL+GG     HAAGFLSGSKDMTARLWR  GSG N+SLEAAA+LRGHANS+SA HAA+SG GD GGA RAYTGDWSGHVC WDVACL G        G     TKRRKTD G  A     V+E  PLA FRAHAQAVTGLAGP
Sbjct:    1 MDFGEPSDDEADAGKVRVKFVTKVPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHAD----GDDAQGTKRRKTDTGAAAXXXXXVTELTPLASFRAHAQAVTGLAGP 300          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.970e-55
Identity = 147/332 (44.28%), Postives = 174/332 (52.41%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDP-------------------PTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTS----AGEGLET-----FVTGCYDGCLRVYGR--GCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASL------------EAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACL---VGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTG--LAGP 299
            +VRVKFVTK+ SIRVT+ P+AVPE+L RYGLSEVVNHLLG +                    P PFD+L+ GRFLR+SL   MR HA+SGE VLE+EYLPALRQPTE     QPDWVS L +    AG G E        + CYDGCLR+YG   G  +    +    P+TAL A                   D   R W L                     E AAVL GH NSV+AV  + +GG   AA   +GDW G +C WD+A      G D  +GG G+     KRRK   G    A A V E  P A F+AH+QAVTG  LAGP
Sbjct:   29 QVRVKFVTKLASIRVTDLPIAVPETLGRYGLSEVVNHLLGLNADTSAAAAAPHDAAPPSSKAPIPFDILIDGRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXX----------XXXXXXDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAGGTHTAA---SGDWDGRMCLWDLAAAQGAAGADAEAGGPGV-----KRRKRAAGE---ADAVVVELEPTAVFKAHSQAVTGVYLAGP 339          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A662YDA7_9STRA (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDA7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.220e-42
Identity = 120/288 (41.67%), Postives = 154/288 (53.47%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAG--EGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFL--SGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 297
            ++RVKFVTK  +IRVTETP AVP SL R GLS+VVNHLL   D P PFD LV G FLR+SL   +  H +S EA+L +EY+ AL +P +   +D PDWVS + +     G E  VTGCYDG LRVY      +A  KAHQ  + A+    S+S  AG +  F+  S  KD  A+LWR      +  L   A L GH NSV AV   +SG      R  +G W   V  W         P S  GG      K +K++ G++A +   +  +  L     H   VTG+A
Sbjct:   90 QIRVKFVTKDAAIRVTETPFAVPVSLSRRGLSQVVNHLLATGDKPRPFDFLVDGLFLRTSLEKYLLAHEVSEEALLVLEYVEALPEPQKQSGSDHPDWVSAVATGSTVSGDELVVTGCYDGVLRVYDVQGTCLASVKAHQGAIKAV----SVSADAGKSEEFVIASSGKDQLAQLWRYTAE--SPQLTPMAALTGHLNSVDAVAMHASG-----QRVVSGSWDNTVRVWQT-------PSSTDGGEQRSAKKHKKSE-GSSAVSFQQLEAEMVLV---GHTSYVTGVA 355          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 160 bits (406), Expect = 5.540e-42
Identity = 111/288 (38.54%), Postives = 154/288 (53.47%), Query Frame = 0
Query:   10 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 297
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   M+R+A+S E++L +EY+ AL +P +    + PDWVS ++ A    +  VTGCYDG +RVY    + +A  KAHQ  V A+    S+    G      S  KD   ++WR   + S+  L A A L GH NSV  +   S G      +A TG W   V  W +     +D  +G    + P  K++ + K +   +   V  +  L     H   VTG+A
Sbjct:    2 DSEGPQVRVKFVTKNAAIRVTETPFAVPTRLNRQGLSQVVNHLLNTTTPRPFDFLIDGVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVSVA---KDVIVTGCYDGQVRVYDLKGECLASVKAHQGAVKAV----SVQFIQGKEYRITSSGKDQMGQVWRF--NASSKQLSAVAALTGHLNSVDTIQLHSGG-----RQALTGSWDNTVRVWHLP----EDDNAGEDDEAQPKKKQKNSAKSSGTVSFRQVEAEIILT---GHTSYVTGVA 268          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 163 bits (412), Expect = 1.120e-41
Identity = 102/231 (44.16%), Postives = 133/231 (57.58%), Query Frame = 0
Query:   10 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDV 240
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   M+RHALS E++L +EY+ AL +P++    + PDWVS +++A    +  VTGCYDG +RVY      +A  KAHQ  V A+    S+     +     S  KD   ++WR   + +   L A A L GH NSV A+       D  A RA TG W   V  W V
Sbjct:  170 DSEGPQVRVKFVTKNAAIRVTETPFAVPMRLNRQGLSQVVNHLLNTAEPRPFDFLIDGNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAA---QDIVVTGCYDGQVRVYDLEGNCLASVKAHQGAVKAV----SVQLAKQNVFLITSSGKDQMGQVWRF--NAATRQLSAVASLTGHLNSVDAIAL-----DARAERALTGSWDNTVRVWMV 386          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 159 bits (402), Expect = 2.230e-41
Identity = 108/227 (47.58%), Postives = 126/227 (55.51%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDV 240
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++ + +S EA+L +EY+ AL +P +   +D PDWVS + S  +  E  VTGCYDG LRVY       A  KAHQ  V A+    S SG    A    S  KD  A+LWR     S   L   A L GH NSV AV   +SG      R  TG W   V  W  
Sbjct:    7 QVRVKFVTKDGSIRVTETPFAVPSRLNRRGLSQVVNHLLATGDSPRPFDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQKQNGSDHPDWVSAVASLDD--ELVVTGCYDGVLRVYDAQGDCKASVKAHQGAVKAVSVSSSKSGEFVVA----SSGKDQLAQLWRYTVKSSK--LSPLAALTGHLNSVDAVQLHASGN-----RVVTGSWDNTVRVWQT 220          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: G5A136_PHYSP (Ribosome biogenesis protein WDR12 homolog n=4 Tax=Phytophthora TaxID=4783 RepID=G5A136_PHYSP)

HSP 1 Score: 159 bits (402), Expect = 2.600e-41
Identity = 118/284 (41.55%), Postives = 141/284 (49.65%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 297
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++   +S EA+L +EY+ AL +P +   +D PDWVS + +    L   VTGCYDG LRVY       A  KAHQ  V A+   PS            S  KD  A+LWR   S   A L   A L GH NSV  V   +SG      R  TG W   V  W       D       G      K +KT+ G  A +   +  +  L     H   VTG+A
Sbjct:    7 QVRVKFVTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATGDKPRPFDFLIDGLFLRSSLDKFLQTSGVSEEALLTLEYVEALPEPQKQSGSDHPDWVSAVAALDGDL--VVTGCYDGVLRVYDAQGDCKASVKAHQGAVKAVSVAPSAEKDGEFV--IASSGKDQLAQLWRF--STITAKLAPVAALTGHLNSVDTVQMHASG-----QRVVTGSWDNTVRVWQAPGASED------AGEQRSAKKHKKTEDGAGAVSFQQLEAEIVLV---GHTSYVTGVA 270          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.960e-40
Identity = 102/238 (42.86%), Postives = 130/238 (54.62%), Query Frame = 0
Query:   10 EADAG-KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCA--VPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLV 244
            ++D G +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD LV G+FLR+SL   + +H  S EA+L +EY+ AL +P +   A+ PDWVS + +A  GL   VTGCYDG +RV+    + +A  KAH   V A+    VP             +  KD T +LW      +   + A A   GH NSV AV    +G      +A TG W   V  WD    V
Sbjct:    4 DSDGGAQVRVKFVTKDAAIRVTETPFAVPARLNRQGLSQVVNHLLNLPVPRPFDFLVDGQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKK----REFVIATSGKDQTGQLWLF--DAAKKRISALAAFTGHLNSVDAVALRVTG-----EQALTGSWDNTVRVWDTKAAV 228          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A2P4YU75_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YU75_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.300e-39
Identity = 102/228 (44.74%), Postives = 128/228 (56.14%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVA 241
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++ + +S E +L +EY+ AL +P + + +D PDWVS + +  +  E  VTGCYDG LRVY       A  KAHQ  + ++    S +G    A    +  KD  A+LWR   S   A L   A L GH NSV AV   ++G      R  TG W   V  W  +
Sbjct:    7 QVRVKFVTKDVSIRVTETPFAVPTRLTRRGLSQVVNHLLATSDKPRPFDFLIDGLFLRSSLDKYLQSNNVSEETLLTLEYVEALPEPQKQKDSDHPDWVSAVAALDD--ELVVTGCYDGVLRVYDAQGDCKASVKAHQGAIKSVSVASSTNGDVVIA----TSGKDQLAQLWRY--SVKTAKLSTMAALTGHLNSVDAVQLHAAG-----KRVVTGSWDNTVRVWTTS 221          
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: M4BPA2_HYAAE (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPA2_HYAAE)

HSP 1 Score: 154 bits (390), Expect = 2.230e-39
Identity = 114/275 (41.45%), Postives = 145/275 (52.73%), Query Frame = 0
Query:    4 GEPSDDEADAGK--VRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMR--RHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFL--SGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTA 271
            G  + D  DA +  +RVKFVTK  +IRVTET  AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++  ++  S E +L +EY+ AL +P + ++ D PDWVS + +  + L   VTGCYDG LRVY       A  KAH   + A+    S+S  A  + G++  S  KD  A+LWR      +A L   A L  H NSV AV   +SG      R  TG W   VC W V       PG        P  K RK   G++A
Sbjct:   19 GRGASDAGDAAQRAIRVKFVTKDAAIRVTETSFAVPSRLSRRGLSQVVNHLLATGDTPRPFDFLIDGLFLRSSLDKYLQTNQNNASEETLLTLEYVEALPEPQKQKNCDHPDWVSAVAALDDNL--VVTGCYDGVLRVYDAQGDCKAAVKAHHGAIKAV----SVSLDAAKSGGYIVASSGKDQLAQLWRYTVD--SAKLSPIAALTRHLNSVDAVQVQASG-----KRVVTGSWDNTVCVWKV-------PGEAEACEEYPTKKHRKIAGGSSA 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI2.690e-16181.58Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A836CE58_9STRA4.970e-5544.28Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A662YDA7_9STRA2.220e-4241.67Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
A0A8K1CSP5_PYTOL5.540e-4238.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C6Q8_PYTIN1.120e-4144.16Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT2.230e-4147.58Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]
G5A136_PHYSP2.600e-4141.55Ribosome biogenesis protein WDR12 homolog n=4 Tax=... [more]
A0A5D6YFB0_9STRA6.960e-4042.86Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A2P4YU75_9STRA1.300e-3944.74Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
M4BPA2_HYAAE2.230e-3941.45Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 195..239
e-value: 7.6
score: 11.4
coord: 140..186
e-value: 0.46
score: 19.1
coord: 98..138
e-value: 17.0
score: 9.3
IPR012972NLEPFAMPF08154NLEcoord: 16..77
e-value: 1.3E-18
score: 67.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 97..317
e-value: 3.5E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 16..298
NoneNo IPR availablePANTHERPTHR19855:SF11RIBOSOME BIOGENESIS PROTEIN WDR12coord: 16..298
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 123..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4608384..4614902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.402.1mRNA_P-fluviatile_contig1.402.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4607203..4614902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.402.1 ID=prot_P-fluviatile_contig1.402.1|Name=mRNA_P-fluviatile_contig1.402.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=356bp
MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVN
HLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQP
TEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAH
QMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAA
VLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGS
GGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLAGPS
AGGAGVGGSGGRDGGCEHVVQRVVGPRGEDVGRGEAGLRAYAERTQGRHL
FGLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR012972NLE
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf