mRNA_P-fluviatile_contig1.402.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.402.1
Unique NamemRNA_P-fluviatile_contig1.402.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 1.620e-159
Identity = 248/304 (81.58%), Postives = 259/304 (85.20%), Query Frame = 1 
Query:    1 MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGG---AGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSG-GD-GGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLAGP 897
            MDFGEPSDDEADAGKVRVKFVTK+PSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVM+RHALSGEAVLEVEYLPALRQPTEAEHADQPDWVS +  AG GLETFVTGCYDGCLRVYG GCKV +L+KAHQ PVTALCAVPSL+GG     HAAGFLSGSKDMTARLWR  GSG N+SLEAAA+LRGHANS+SA HAA+SG GD GGA RAYTGDWSGHVC WDVACL G        G     TKRRKTD G  A     V+E  PLA FRAHAQAVTGLAGP
Sbjct:    1 MDFGEPSDDEADAGKVRVKFVTKVPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHAD----GDDAQGTKRRKTDTGAAAXXXXXVTELTPLASFRAHAQAVTGLAGP 300
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 7.870e-102
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 2 
Query:  950 STLYSASLDRAVKMWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGQDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIISGGEDGAVKTYVVPERSND 1399
            STLYSASLDRAVK WDAERQDC+HTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCG DGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKI+SGGEDGAVKTYVVPER+ND
Sbjct:   66 STLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPERNND 215
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 197 bits (500), Expect = 9.630e-54
Identity = 147/332 (44.28%), Postives = 174/332 (52.41%), Query Frame = 1 
Query:   43 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDP-------------------PTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTS----AGEGLET-----FVTGCYDGCLRVYGR--GCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASL------------EAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACL---VGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTG--LAGP 897
            +VRVKFVTK+ SIRVT+ P+AVPE+L RYGLSEVVNHLLG +                    P PFD+L+ GRFLR+SL   MR HA+SGE VLE+EYLPALRQPTE     QPDWVS L +    AG G E        + CYDGCLR+YG   G  +    +    P+TAL A                   D   R W L                     E AAVL GH NSV+AV  + +GG   AA   +GDW G +C WD+A      G D  +GG G+     KRRK   G    A A V E  P A F+AH+QAVTG  LAGP
Sbjct:   29 QVRVKFVTKLASIRVTDLPIAVPETLGRYGLSEVVNHLLGLNADTSAAAAAPHDAAPPSSKAPIPFDILIDGRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXX----------XXXXXXDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAGGTHTAA---SGDWDGRMCLWDLAAAQGAAGADAEAGGPGV-----KRRKRAAGE---ADAVVVELEPTAVFKAHSQAVTGVYLAGP 339
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A662YDA7_9STRA (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDA7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.920e-41
Identity = 120/288 (41.67%), Postives = 154/288 (53.47%), Query Frame = 1 
Query:   43 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAG--EGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFL--SGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 891
            ++RVKFVTK  +IRVTETP AVP SL R GLS+VVNHLL   D P PFD LV G FLR+SL   +  H +S EA+L +EY+ AL +P +   +D PDWVS + +     G E  VTGCYDG LRVY      +A  KAHQ  + A+    S+S  AG +  F+  S  KD  A+LWR      +  L   A L GH NSV AV   +SG      R  +G W   V  W         P S  GG      K +K++ G++A +   +  +  L     H   VTG+A
Sbjct:   90 QIRVKFVTKDAAIRVTETPFAVPVSLSRRGLSQVVNHLLATGDKPRPFDFLVDGLFLRTSLEKYLLAHEVSEEALLVLEYVEALPEPQKQSGSDHPDWVSAVATGSTVSGDELVVTGCYDGVLRVYDVQGTCLASVKAHQGAIKAV----SVSADAGKSEEFVIASSGKDQLAQLWRYTAE--SPQLTPMAALTGHLNSVDAVAMHASG-----QRVVSGSWDNTVRVWQT-------PSSTDGGEQRSAKKHKKSE-GSSAVSFQQLEAEMVLV---GHTSYVTGVA 355
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 160 bits (406), Expect = 6.960e-41
Identity = 111/288 (38.54%), Postives = 154/288 (53.47%), Query Frame = 1 
Query:   28 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 891
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   M+R+A+S E++L +EY+ AL +P +    + PDWVS ++ A    +  VTGCYDG +RVY    + +A  KAHQ  V A+    S+    G      S  KD   ++WR   + S+  L A A L GH NSV  +   S G      +A TG W   V  W +     +D  +G    + P  K++ + K +   +   V  +  L     H   VTG+A
Sbjct:    2 DSEGPQVRVKFVTKNAAIRVTETPFAVPTRLNRQGLSQVVNHLLNTTTPRPFDFLIDGVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVSVA---KDVIVTGCYDGQVRVYDLKGECLASVKAHQGAVKAV----SVQFIQGKEYRITSSGKDQMGQVWRF--NASSKQLSAVAALTGHLNSVDTIQLHSGG-----RQALTGSWDNTVRVWHLP----EDDNAGEDDEAQPKKKQKNSAKSSGTVSFRQVEAEIILT---GHTSYVTGVA 268
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 163 bits (412), Expect = 1.470e-40
Identity = 102/231 (44.16%), Postives = 133/231 (57.58%), Query Frame = 1 
Query:   28 EADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDV 720
            +++  +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   M+RHALS E++L +EY+ AL +P++    + PDWVS +++A    +  VTGCYDG +RVY      +A  KAHQ  V A+    S+     +     S  KD   ++WR   + +   L A A L GH NSV A+       D  A RA TG W   V  W V
Sbjct:  170 DSEGPQVRVKFVTKNAAIRVTETPFAVPMRLNRQGLSQVVNHLLNTAEPRPFDFLIDGNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAA---QDIVVTGCYDGQVRVYDLEGNCLASVKAHQGAVKAV----SVQLAKQNVFLITSSGKDQMGQVWRF--NAATRQLSAVASLTGHLNSVDAIAL-----DARAERALTGSWDNTVRVWMV 386
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 159 bits (402), Expect = 2.740e-40
Identity = 108/227 (47.58%), Postives = 126/227 (55.51%), Query Frame = 1 
Query:   43 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDV 720
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++ + +S EA+L +EY+ AL +P +   +D PDWVS + S  +  E  VTGCYDG LRVY       A  KAHQ  V A+    S SG    A    S  KD  A+LWR     S   L   A L GH NSV AV   +SG      R  TG W   V  W  
Sbjct:    7 QVRVKFVTKDGSIRVTETPFAVPSRLNRRGLSQVVNHLLATGDSPRPFDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQKQNGSDHPDWVSAVASLDD--ELVVTGCYDGVLRVYDAQGDCKASVKAHQGAVKAVSVSSSKSGEFVVA----SSGKDQLAQLWRYTVKSSK--LSPLAALTGHLNSVDAVQLHASGN-----RVVTGSWDNTVRVWQT 220
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: G5A136_PHYSP (Ribosome biogenesis protein WDR12 homolog n=4 Tax=Phytophthora TaxID=4783 RepID=G5A136_PHYSP)

HSP 1 Score: 159 bits (402), Expect = 3.200e-40
Identity = 118/284 (41.55%), Postives = 141/284 (49.65%), Query Frame = 1 
Query:   43 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGSGGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLA 891
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++   +S EA+L +EY+ AL +P +   +D PDWVS + +    L   VTGCYDG LRVY       A  KAHQ  V A+   PS            S  KD  A+LWR   S   A L   A L GH NSV  V   +SG      R  TG W   V  W       D       G      K +KT+ G  A +   +  +  L     H   VTG+A
Sbjct:    7 QVRVKFVTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATGDKPRPFDFLIDGLFLRSSLDKFLQTSGVSEEALLTLEYVEALPEPQKQSGSDHPDWVSAVAALDGDL--VVTGCYDGVLRVYDAQGDCKASVKAHQGAVKAVSVAPSAEKDGEFV--IASSGKDQLAQLWRF--STITAKLAPVAALTGHLNSVDTVQMHASG-----QRVVTGSWDNTVRVWQAPGASED------AGEQRSAKKHKKTEDGAGAVSFQQLEAEIVLV---GHTSYVTGVA 270
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BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.080e-39
Identity = 102/238 (42.86%), Postives = 130/238 (54.62%), Query Frame = 1 
Query:   28 EADAG-KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCA--VPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLV 732
            ++D G +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD LV G+FLR+SL   + +H  S EA+L +EY+ AL +P +   A+ PDWVS + +A  GL   VTGCYDG +RV+    + +A  KAH   V A+    VP             +  KD T +LW      +   + A A   GH NSV AV    +G      +A TG W   V  WD    V
Sbjct:    4 DSDGGAQVRVKFVTKDAAIRVTETPFAVPARLNRQGLSQVVNHLLNLPVPRPFDFLVDGQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKK----REFVIATSGKDQTGQLWLF--DAAKKRISALAAFTGHLNSVDAVALRVTG-----EQALTGSWDNTVRVWDTKAAV 228
[Close]
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Match: A0A2P4YU75_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YU75_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.490e-38
Identity = 102/228 (44.74%), Postives = 128/228 (56.14%), Query Frame = 1 
Query:   43 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAHQMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAAVLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVA 723
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   ++ + +S E +L +EY+ AL +P + + +D PDWVS + +  +  E  VTGCYDG LRVY       A  KAHQ  + ++    S +G    A    +  KD  A+LWR   S   A L   A L GH NSV AV   ++G      R  TG W   V  W  +
Sbjct:    7 QVRVKFVTKDVSIRVTETPFAVPTRLTRRGLSQVVNHLLATSDKPRPFDFLIDGLFLRSSLDKYLQSNNVSEETLLTLEYVEALPEPQKQKDSDHPDWVSAVAALDD--ELVVTGCYDGVLRVYDAQGDCKASVKAHQGAIKSVSVASSTNGDVVIA----TSGKDQLAQLWRY--SVKTAKLSTMAALTGHLNSVDAVQLHAAG-----KRVVTGSWDNTVRVWTTS 221
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI1.620e-15981.58Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6H5KQ32_9PHAE7.870e-10296.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE58_9STRA9.630e-5444.28Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A662YDA7_9STRA2.920e-4141.67Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
A0A8K1CSP5_PYTOL6.960e-4138.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C6Q8_PYTIN1.470e-4044.16Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT2.740e-4047.58Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]
G5A136_PHYSP3.200e-4041.55Ribosome biogenesis protein WDR12 homolog n=4 Tax=... [more]
A0A5D6YFB0_9STRA8.080e-3942.86Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A2P4YU75_9STRA1.490e-3844.74Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4607203..4614902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.9
Seed ortholog evalue2.7e-130
Seed eggNOG ortholog2880.D8LI35
Preferred nameYTM1
KEGG koko:K11578,ko:K14863
GOsGO:0000151,GO:0000460,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009506,GO:0009605,GO:0009607,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022613,GO:0030054,GO:0030447,GO:0030684,GO:0030686,GO:0030687,GO:0031461,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0036170,GO:0036180,GO:0040007,GO:0042221,GO:0042254,GO:0042273,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046689,GO:0050896,GO:0051276,GO:0051716,GO:0055044,GO:0070013,GO:0070545,GO:0071496,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:1901360,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsKOG0313@1,KOG0313@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03036,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-04_003080.1
Exons8
Model size1399
Cds size1068
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815330.9838536-UTR-P-fluviatile_contig1:4607202..46073851622815330.9838536-UTR-P-fluviatile_contig1:4607202..4607385Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4607203..4607385 -
1693561524.1851575-UTR-P-fluviatile_contig1:4607202..46073851693561524.1851575-UTR-P-fluviatile_contig1:4607202..4607385Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4607203..4607385 -
1622815330.9952855-UTR-P-fluviatile_contig1:4607723..46078651622815330.9952855-UTR-P-fluviatile_contig1:4607723..4607865Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4607724..4607865 -
1693561524.195251-UTR-P-fluviatile_contig1:4607723..46078651693561524.195251-UTR-P-fluviatile_contig1:4607723..4607865Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4607724..4607865 -
1622815331.0067995-UTR-P-fluviatile_contig1:4608377..46083831622815331.0067995-UTR-P-fluviatile_contig1:4608377..4608383Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4608378..4608383 -
1693561524.2031794-UTR-P-fluviatile_contig1:4608377..46083831693561524.2031794-UTR-P-fluviatile_contig1:4608377..4608383Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4608378..4608383 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815331.0156906-CDS-P-fluviatile_contig1:4608383..46086741622815331.0156906-CDS-P-fluviatile_contig1:4608383..4608674Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4608384..4608674 -
1693561524.212097-CDS-P-fluviatile_contig1:4608383..46086741693561524.212097-CDS-P-fluviatile_contig1:4608383..4608674Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4608384..4608674 -
1622815331.026435-CDS-P-fluviatile_contig1:4609242..46094441622815331.026435-CDS-P-fluviatile_contig1:4609242..4609444Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4609243..4609444 -
1693561524.2220929-CDS-P-fluviatile_contig1:4609242..46094441693561524.2220929-CDS-P-fluviatile_contig1:4609242..4609444Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4609243..4609444 -
1622815331.037153-CDS-P-fluviatile_contig1:4611951..46121001622815331.037153-CDS-P-fluviatile_contig1:4611951..4612100Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4611952..4612100 -
1693561524.2319453-CDS-P-fluviatile_contig1:4611951..46121001693561524.2319453-CDS-P-fluviatile_contig1:4611951..4612100Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4611952..4612100 -
1622815331.0506723-CDS-P-fluviatile_contig1:4612815..46129171622815331.0506723-CDS-P-fluviatile_contig1:4612815..4612917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4612816..4612917 -
1693561524.2413368-CDS-P-fluviatile_contig1:4612815..46129171693561524.2413368-CDS-P-fluviatile_contig1:4612815..4612917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4612816..4612917 -
1622815331.063996-CDS-P-fluviatile_contig1:4613539..46138181622815331.063996-CDS-P-fluviatile_contig1:4613539..4613818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4613540..4613818 -
1693561524.2508316-CDS-P-fluviatile_contig1:4613539..46138181693561524.2508316-CDS-P-fluviatile_contig1:4613539..4613818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4613540..4613818 -
1622815331.0730815-CDS-P-fluviatile_contig1:4614857..46149021622815331.0730815-CDS-P-fluviatile_contig1:4614857..4614902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4614858..4614902 -
1693561524.2646837-CDS-P-fluviatile_contig1:4614857..46149021693561524.2646837-CDS-P-fluviatile_contig1:4614857..4614902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4614858..4614902 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.402.1prot_P-fluviatile_contig1.402.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4608384..4614902 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.402.1

>prot_P-fluviatile_contig1.402.1 ID=prot_P-fluviatile_contig1.402.1|Name=mRNA_P-fluviatile_contig1.402.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=356bp
MDFGEPSDDEADAGKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVN
HLLGRDPPTPFDMLVMGRFLRSSLRSVMRRHALSGEAVLEVEYLPALRQP
TEAEHADQPDWVSGLTSAGEGLETFVTGCYDGCLRVYGRGCKVIALQKAH
QMPVTALCAVPSLSGGAGHAAGFLSGSKDMTARLWRLVGSGSNASLEAAA
VLRGHANSVSAVHAASSGGDGGAARAYTGDWSGHVCTWDVACLVGDDPGS
GGGGISTPHTKRRKTDKGTTASALADVSEQAPLARFRAHAQAVTGLAGPS
AGGAGVGGSGGRDGGCEHVVQRVVGPRGEDVGRGEAGLRAYAERTQGRHL
FGLLG*
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mRNA from alignment at P-fluviatile_contig1:4607203..4614902-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.402.1 ID=mRNA_P-fluviatile_contig1.402.1|Name=mRNA_P-fluviatile_contig1.402.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7700bp|location=Sequence derived from alignment at P-fluviatile_contig1:4607203..4614902- (Porterinema fluviatile SAG_2381)
ATGGACTTCGGCGAGCCATCGGACGACGAGGCGGATGCTGGAAAGGTGCG
AAATTAGGCACACGATATCCAGGCAGCAGATGGGGATGAGTGGAGCGCTC
TTCGGCAGTTGCCACACCCTGGAGGTTGATCGCTGTCCACCGCTGGGGAT
TACACTTCCTCTCGCTCGTTGCCTGGGTTACAAGGCCCACTTCAACGCCG
ACATCGCTCCATCACACAGAGACGTAGCGATTACACGCACTGGTCGGGCG
ACACAGCTCTTCATGCACACGACCGAGAGAGCAGCGGCTACAGCGGACAT
TCGTAGATTGCGGGGGATGGTGGAATCTACAGCAGACGGACAGTCCCGTA
TCATCTCCCAGCACATGTCCGTGGGGTACCAGACGCACGAGAGGGAAGTT
TATTTAGAGGTTCAACGTGTATTGCATTCCATTGGGGAAAATGCAACGTT
AGCAGGCCTCCCAGCACCACGGTAAAGGCAGATCGAGTCGCAAGAGTAAG
AGCGACGGTGGATCGGTGGATTCCACAGGTCGGGTTGAAAAGCTCCGTTT
TTCGTTCGTACGCAACGGGCCACCAAAGCCCGGCGACACGTTCGTGGCTT
TCTCTCGATGATATATTTCGAATCCCGTTTTTAAAGGCGCGGCACGCATT
TTGCTGGTGAGCTTTTGAGCCTCAGAAATTGCTTCAAAAGTGTGTGGTGG
ACGTACAACTGTCGTGTATTGAAGGAGTTGTGGACCCTCCAGCTTCAAGT
ATCGCCTTAACCCAGGTGCCGTGTCTGCCCACGGATGAATCCTCTCGCTC
TCGCTCTCTAGCGCTTGGATTGCAGTGAATCTACCTGCAGTGAGCCACGC
ATTTTCGCAGGAGAATGCGGCGGGATAAAATGCTCCGACCTTCCGCATTC
CTTCGCTAGTCGGTTCGGCTCCTCCTGGCCGAGACATCTCACGCCTACGC
TCCTTCGATAGCCAGCCTCTCCAACCGCACCCCCCACCCCTACGACTCTC
ACCCGCGCCGCCTCGTGAAACAAGCTAAATCTGCAAGTTTAGGAATAAAA
CACAACCCTTGCGCAAATGACTTCGCTTCTGCAGGTGCGGGTGAAGTTCG
TGACGAAAATCCCGTCCATTCGCGTCACCGAGACCCCCGTAGCTGTCCCG
GAGAGCCTGCAGCGCTATGGCCTGTCGGAGGTGGTGAACCACCTCCTCGG
CCGCGACCCGCCGACGCCGTTCGACATGCTCGTGATGGGCCGCTTCCTGC
GCAGCTCCCTCCGGTCGGTGATGCGGAGGCACGCCCTCAGCGGGGAGGCC
GTGCTGGAGGTGGAGTACCTGCCGGCGCTCCGGCAGCCCACGGAGGCAGA
GCACGCCGACCAGGTCTGTGATAGGATGAGGGGGAGAGCAGGGAGGGGGA
AGGGGAGGGCGTTTTCGCGATGTGGTGTAGTTAGTGCTGTGCTGATGTTA
CTGCTACTGTGCAAAGTTGTTGTTGACTTACCTCCAGTCCGGGGCTGTCG
TTGCCTCCAGAGGCACGAAGCACACCGACGACGTCATGCGCTCCCAAGAG
GCAGTGGTCTTGTTCTGGCCGATCATGCGGAGGTGGGAAGGAGGTGGAGG
AGGAGGGGGAAGGGGGGGGGGCGTGGACAAGGGGGAGAAAGGTGTTGTTG
TCAGTGTCAGCGTCGGTGTTGACGTTGGTGAAGGTGTCGATGAAAGCTCA
TCGGCCTTGCTGGCGCTTTCGCTTCACTGAAGGGACGTCAGTCGATAAGT
CAGACCCCGACTGCTCCCGGGTTTGTAATCGGCCTCCGGCTCCATAATTT
TCCTGTGCCACGGCGACTGGAAGACCCCTGTATTACCCTTCGGCGTCGCC
CTTTCACTGCCTCTCTCACTCCCTCCTTCCCCCCCGCTGCGACGCCACCC
CTCTTGGTCCTCGCCCCCCGTTCCTGTTCTCACTCACACGGGTCTTGTCC
CTTGCTAACTCGCTACACCCGACTTGGCGCGGCAGCCGGATTGGGTGAGC
GGGCTGACCAGCGCCGGGGAGGGTCTGGAGACGTTCGTTACCGGCTGCTA
CGACGGCTGCCTTCGGGTCTACGGCCGTGGCTGCAAGGTTAGAGCAGAGC
CGGTTTTCACACGGGCTGTAGCCACGGGTGTCGGGGCTCGATCGGGTCGA
TCCAGGAATGTCTCCGAGACTTTGCCTCCTTTATTTTGACCCGCCAAGAT
GTAAGCTCGAAACAACGAGAGGAGCGACCTTTCCGCTTGTGGCTGCGTCT
GCACGTTACGCCCATCACCCGCATTACAACCTACGTAGTCGCCTGTAGAA
ATCCTCTGGGCTACAATATCTTGTAAGAACAGCCACTAGGAAGAGTCCAG
AGGAACCGCGAAACATCGCGACGTTTTTCACGTGGAATGTGCTCTCTGTA
TCTTCGGGGTTTGTGCCGCTTGAAATCTCTTTTCTCCAGGCTCTCCTAGG
GCGATGCGGATAGCAGGTCAGGAGAACAGAGAAAGATGCTCCGAATGAAA
CCGTGTGGGCTTTCGCGCACTCTCTACTGAGCCTGAAACTGACCGATGGT
GTTTCTCGAGCTTCAAGACACTGGCCCGTGAGTTGTTCCTTCAGTCTTTG
GGCAAACAAGAAACGAAACCCTGACGAACATATTCGCAGTATACAATCGG
TGTACCCCGCCTCGGGGCTGTGCCTTCTTTGGCTGAGCGGGCTTTGCGTG
CCCTCAGCACTGCTTCGATGTCCAGACAGCAAAAACAACACCTCACACAA
ATTAACGCTCATGGGCCGCCCTCCCCAACCCCGCTTGTCTCCCGCGGAGC
AGGTGATCGCATTGCAAAAGGCTCACCAGATGCCGGTGACGGCGCTTTGC
GCCGTGCCCTCCCTGTCCGGCGGGGCGGGGCACGCCGCCGGGTTCTTGAG
TGGCAGCAAGGACATGACGGCGAGGTTATGGAGATTGGTGGGGTCCGGCA
GGTGAAAGGGCAGCGGCAGCAACGCCGTGTGTTTTCCGTGTTTGGCGTTT
GCCCTGGTGCATTCCGAGCGTAATTTTGCTCCAGCAAGCGCGCGGGCAAG
GGCAGTAGAGTGGGGTCGCCGGTTCGTTGTGACGCCTTGCTTGTGCGTGA
GGGACAGACTCTTGTCGTCGTCGTGGATTTGTCGCCTATCTGGTGCGACC
ACCCGACGTCCTGCCCGCCGTTGTTTTCGTTTCCTTTTCCCCCGAAGCCT
TTCACCTCCTGCTGCTCTTGTTCATTTTCGTTGCGAACCAGTCATCCTTT
TCCGTCTGTTCGTCCCCGCCTTCCTGTCTGGCTAGTGGCATCTGCGTCGG
CTATCGTCTGAGCCCACGAGCGCGCGTGGTGCTCTCCAGTTTCCTTCCCT
CGACCTTTCAGTCAAATGCATCCCCGCGGTCAAATCGCCAAGTAGATGGA
GGGAAGGAGTGGTTGTGAACTTGTTTAAGAAAGGAGACAAGACTGACCCA
GGAAACTACAGGGGGATCACACTGTTGGACACAGTAGGAAAAGTGTTCTG
TAAGCTGCTGAACGATAGGATAATGGGAGTATTGGAGAAGGAACATAGCA
TTAGTGAGGGCCAGGCAGGTTTCCGAAGGAAGAGGGGGTGCGTAGACCAC
GTATTCACGGTAGGGAGAATCATCCAACGTAGAAAAAGGGCGGGAAAGCC
GACGTACTGCTTCTTCCTGGACGTGAAAAAGGCATACGACACCGTATGGA
GAAATGGGCTGTGGAAATAACTGTCCAAATACGGGATCAAGGGGAAAATG
TGGAGAGTGCTGAAGAAGATGACAGAGTGTACGAAAAGCGCGGTCATGTT
AGACGGAGAAGTGTCTAAAGTCTTCGACATTGAGCAGGGAGTCCCACAAG
GTTGCACGCTGTCCCCAACATTGTTCCATGTTCATCAACGATCTGTGGGA
AGTCCTAGAAGCAGTCCGGAAGGGAGTAAAAGTAGGGGACACGGAAACGT
CGGTTTCAGGAATGCTGTTTGCGGATGATTTTGTCGGTATGTCGGACACC
TTTCAGGGACTGCAACTGCAAATTGACGCGGCGAAGTTTACTGATAAGTG
GAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCATGGTATGCAACGAGA
ACAAGGAGCAACCAGTAGAACATAGATGGAAGTGGGGGATCGATGAGATT
GCAGCAGTGCACCAGTACAAATACCTCGGAGTAGAGATCGCAAAAGACTG
CTCGTGGAATGCACACATGTCCAAGGTAGCGGAAATGTGCAAAGCACAAG
CAGGGAAGCTGCACCCAATACTCGCAAACCGGCACCTCGATACATGCATC
AAATTGAAGGTTTTGAAAAGCGTAATCGTACCGCCGCTAGAGTACGCCGG
AGAAGTATGGGAAGGAAATAAGAAGGTAGTGAAAGAACTTGAGGCGGCGC
AGATGAAAGCAGCGAAAATCATCCTAGGATGCTCCAAGCGCACAAGAAAG
ACAGCCGTCAGGGCAGATTTGGGGATCCGATCCCTACGGTCGGGAAGAGA
CGCGAGGAAGCTGATATGGCAGTATCGCATGTGCGGGATGGGAGAGGAGA
GGTTGCCGAGCATTGTATGGGAGGCGAAGTGGGCAAACAAAAAGAGGGGT
AGACAACCCACAGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGTC
CGACATCGACGAAGATGAAACGCTGGAAACGGAGGATCTAAACGGGTTCA
AGGAGAAGATATGTGTTGCTGGTGCCGAGAGAGAAGAACAGATTCTTCTA
CAGAAAGAAACCAAGGATATGGAGGGTCTAGAAGTGTACGGAATGTTGAA
GGAAGGAATAGGGTTCAAGGATTACCTACATGGACCAATGGATGCAGGAA
CAAAGCTTAAGGTAAAATTCAGGACCGGGGACATAGGCCTTCGAAAATGT
CGACGAAGACATAGGACGGTAGACGACGAAGACGACGAGTTCAAATGTGA
TTGCGGCTTCGAATGCGACGACCGTGTTAATGTAGTCGCGGAATGTCCGT
GGTACAAGAAGGAGAGGGAAGTGTACGTAACTGAGCTGGGAAAAATAGAT
GGGATGTACAGGGAGGTGTTTGAGGCATGGAATAGAGAGGAAAGGACGGT
AGCTGTACTGGGGCATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCG
TTAGGATAGACAGACTAAGGAAGACATTTTCGAGCCACCTTTGGCAAAGT
AGAAAGGAACGATTGGCCATCAGTGATCGGTCCTGTGGGAACAATGCTCC
GTCCTCTCGAGGGCGCGTGGTCAATGGTCTAATCGCTAAGGCAAGCAAAA
CATAAGAGTACGCACCCCCCCCCCGGTCAAATCGTGGGGCACGCTTTGTC
CCTTCTCTCTCGAACGGTATGCCAGCCAAGTCCCCCTCTCACCCAGCAGC
CCCTTGACGTTTGTTCTTCTCGCGCGCTACGGCGTTGCGCTGGTGTCTTG
AAATACAGCAACGCGTCGTTGGAAGCAGCGGCCGTTCTCCGAGGCCACGC
CAACAGCGTCTCCGCCGTGCACGCGGCCTCGAGTGGCGGCGACGGGGGCG
CGGCGAGGGCCTACACCGGCGATTGGAGCGGGCACGTGTGCACCTGGGAT
GTGGCCTGTCTAGTGGGGGATGACCCTGGGTCGGGCGGCGGCGGTATTTC
CACCCCTCACGTGAGTGATCACAGTTCGTGCGCAGGTTTTCTCCGCCAGC
GGGGTCAGTATTGTCTTTTTCTATTTTGTCGGTGCTTGTGGTGACGTCGC
GTTGCTGGTGTGATGTAAAATATTCCGCTGTCAGCATCAAAGTCAGTGTG
TTCAAGGCGTCGCAAAGGTAGACAACCTTGTCGCAGGTTCACGCCTCAGG
TGATCCTTTCGCCCTCGATAAAAACAAAAGCGTCGCCAATGAGATGGTCT
GGGTGCTCTCGGATGGAGATTGTTCTCGTTTTACTTTTCGGACACGTGGT
GACTTCTCTCACTCATCATCATCGTCCAACCTACTCCTGGAACCCGCGTC
CCCGTTAGACGTGATATGCCGGCTGCAACCTCCGCCGGAAGAATCCCAGC
AGCAGCAGAACCCCCTATGTGCTTCTTTTTTTCTCTCCTGACCGCCACGT
GCGCACCAATATACTGTGCGTACACACGCATGCCTTCCCCGCGGCAGCCA
TCGTAATCTTCTTCCCCAGCTTTACGTTGCCCAGCCTGCCATGGCATGCG
TCCCCTCTCGCTTGGGCCCGAACAGGAGACGAAACGCAGGAAGACGGACA
AAGGCACGACGGCGTCCGCTCTGGCGGACGTCTCCGAGCAGGCCCCGTTG
GCGAGGTTTCGCGCTCACGCTCAGGCGGTCACGGGCCTCGCAGGGCCGAG
CGCAGGGGGGGCGGGGGTTGGCGGGAGCGGGGGCAGGGACGGCGGTTGTG
AGCACGTTGTACAGCGCGTCGTTGGACCGCGCGGTGAAGATGTGGGACGC
GGAGAGGCAGGACTGCGTGCATACGCTGAACGCACCCAAGGCCGTCACTT
GTTTGGGCTGCTCGGATAGCGGGCGGTACGTGACACGATGGGGGCCGAGG
GGTCGGAGGGAGGGGGGGCAGGTTCTAGCGGGCGGGGTCTCTTTCTCTTT
TTTTCTCCTTTCAAGGATCGTTTTAATTCTGATGTGTCAAAGTTAAATAC
GAGGTATTGATGGAGCCCAGGAAGTAACTCGGCATACTCTAGGCCGAGCG
CGTCACAGACGCGTGTCGCAATGATGGGGTATGTTAATCGAGCGAGGAGC
ACGTAGCACTTGCTTGCACATCTTGGTGGTCGCGTATTCACGGCTTCTTA
TTCATCTCTTCATTTTGTCTGCCCGCTTGGTGGCGCAGGACGTTCGTTAT
GCTGTGCTGTTCTTTCGGGCCTGCCTTAACTGCTGTTCTTACGTCGCCCC
CTAACCGCCGGCTCTCGGATCTTTGCTCTTTGGGGGGTGAACTTCGTAAG
AAGCAATCGGCTGTTGCAGACTTCGTCGTTGGTCTCCGCGCGTACCTCCC
CCCGTTCCGTCCGCTCGTCATCGCTCATGCGCAACAGAATGCTAGCCACC
GGCCACCCGGATGCACGAGTGCGCATCTGGGACACTCGAACGCAGGGAGA
GACCCTCACGAGAGCCTCTCTCAGCTCGCACAAGCAGTGGGTAACGGATG
TCAAGTGGGCGCCGGGGTCGGAAACGATGGTGCGTACAACTGTTGCTGTT
CCTCTCTTCACCGTGTTGTTTTTTTCAAGCTCGCGGTCGTATCTGAGGTC
TGAAACTTCATTAGCGGGCTTCGTGACAGAAGCCCCGCCCCGCCCTGCCC
CGCCCCGCCCTTTCTCTATCGCAGCTGTTCATCAAATGAGATTCCCTGTG
TTTTTTTTTTCCATTCCTCTTGATTTCTACCGGAGCACTTGCCTGCGGCT
CATAAGTTGACAGTTTACGCCCTCTCGTCAAAGCGTCCACACGCGGGTTT
ATGCTGAATTTTTTGTTTGCCGCCTTCCCGTGCATTCGTGTCCCGTTTGT
CGTGTCCGCACACGCAGGTGCTGAGCTGCGGCCAAGACGGAGCGGTCAAG
CTCTGGGACATCCGCTCCACCCTGCCGCTGCACAGCGCGCAGGCGCATCA
GGGGAAGGCTCTCTGCTGCGGCTGGCAGGACGGGAAGATTATCAGCGGGG
GCGAAGACGGAGCGGTTAAGACTTACGTCGTCCCCGAGAGGAGCAACGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4607203..4614902-

>mRNA_P-fluviatile_contig1.402.1 ID=mRNA_P-fluviatile_contig1.402.1|Name=mRNA_P-fluviatile_contig1.402.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2136bp|location=Sequence derived from alignment at P-fluviatile_contig1:4607203..4614902- (Porterinema fluviatile SAG_2381)
ATGGACTTCGGCGAGCCATCGGACGACGAGGCGGATGCTGGAAAGATGGA
CTTCGGCGAGCCATCGGACGACGAGGCGGATGCTGGAAAGGTGCGGGTGA
AGTTCGTGACGAAAATCCCGTCCATTCGCGTCACCGAGACCCCCGTAGCT
GTCCCGGAGAGCCTGCAGCGCTATGGCCTGTCGGAGGTGGTGAACCACCT
CCTCGGCCGCGACCCGCCGACGCCGTTCGACATGCTCGTGATGGGCCGCT
TCCTGCGCAGCTCCCTCCGGTCGGTGATGCGGAGGCACGCCCTCAGCGGG
GAGGCCGTGCTGGAGGTGGAGTACCTGCCGGCGCTCCGGCAGCCCACGGA
GGCAGAGCACGCCGACCAGGTGCGGGTGAAGTTCGTGACGAAAATCCCGT
CCATTCGCGTCACCGAGACCCCCGTAGCTGTCCCGGAGAGCCTGCAGCGC
TATGGCCTGTCGGAGGTGGTGAACCACCTCCTCGGCCGCGACCCGCCGAC
GCCGTTCGACATGCTCGTGATGGGCCGCTTCCTGCGCAGCTCCCTCCGGT
CGGTGATGCGGAGGCACGCCCTCAGCGGGGAGGCCGTGCTGGAGGTGGAG
TACCTGCCGGCGCTCCGGCAGCCCACGGAGGCAGAGCACGCCGACCAGCC
GGATTGGGTGAGCGGGCTGACCAGCGCCGGGGAGGGTCTGGAGACGTTCG
TTACCGGCTGCTACGACGGCTGCCTTCGGGTCTACGGCCGTGGCTGCAAG
CCGGATTGGGTGAGCGGGCTGACCAGCGCCGGGGAGGGTCTGGAGACGTT
CGTTACCGGCTGCTACGACGGCTGCCTTCGGGTCTACGGCCGTGGCTGCA
AGGTGATCGCATTGCAAAAGGCTCACCAGATGCCGGTGACGGCGCTTTGC
GCCGTGCCCTCCCTGTCCGGCGGGGCGGGGCACGCCGCCGGGTTCTTGAG
TGGCAGCAAGGACATGACGGCGAGGTTATGGAGATTGGTGGGGTCCGGCA
GGTGATCGCATTGCAAAAGGCTCACCAGATGCCGGTGACGGCGCTTTGCG
CCGTGCCCTCCCTGTCCGGCGGGGCGGGGCACGCCGCCGGGTTCTTGAGT
GGCAGCAAGGACATGACGGCGAGGTTATGGAGATTGGTGGGGTCCGGCAG
CAACGCGTCGTTGGAAGCAGCGGCCGTTCTCCGAGGCCACGCCAACAGCG
TCTCCGCCGTGCACGCGGCCTCGAGTGGCGGCGACGGGGGCGCGGCGAGG
GCCTACACCGGCGATTGGAGCGGGCACGTGTGCACCTGGGATGTGGCCTG
TCTAGTGGGGGATGACCCTGGGTCGGGCGGCGGCGGTATTTCCACCCCTC
ACCAACGCGTCGTTGGAAGCAGCGGCCGTTCTCCGAGGCCACGCCAACAG
CGTCTCCGCCGTGCACGCGGCCTCGAGTGGCGGCGACGGGGGCGCGGCGA
GGGCCTACACCGGCGATTGGAGCGGGCACGTGTGCACCTGGGATGTGGCC
TGTCTAGTGGGGGATGACCCTGGGTCGGGCGGCGGCGGTATTTCCACCCC
TCACACGAAACGCAGGAAGACGGACAAAGGCACGACGGCGTCCGCTCTGG
CGGACGTCTCCGAGCAGGCCCCGTTGGCGAGGTTTCGCGCTCACGCTCAG
GCGGTCACGGGCCTCGCAGGGCCGAGCGCAGGGGGGGCGGGGGTTGGCGG
GAGCGGGGGCAGGGACGGCGGTTGTGAGCACGTTGTACAGCGCGTCGTTG
GACCGCGCGGTGAAGATGTGGGACGCGGAGAGGCAGGACTGCGTGCATAC
GCTGAACGCACCCAAGGCCGTCACTTGTTTGGGCTGCTCGGATAGACGAA
ACGCAGGAAGACGGACAAAGGCACGACGGCGTCCGCTCTGGCGGACGTCT
CCGAGCAGGCCCCGTTGGCGAGGTTTCGCGCTCACGCTCAGGCGGTCACG
GGCCTCGCAGGGCCGAGCGCAGGGGGGGCGGGGGTTGGCGGGAGCGGGGG
CAGGGACGGCGGTTGTGAGCACGTTGTACAGCGCGTCGTTGGACCGCGCG
GTGAAGATGTGGGACGCGGAGAGGCAGGACTGCGTGCATACGCTGAACGC
ACCCAAGGCCGTCACTTGTTTGGGCTGCTCGGATAG
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