prot_P-fluviatile_contig20.4411.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig20.4411.1
Unique Nameprot_P-fluviatile_contig20.4411.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length184
Homology
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.100e-86
Identity = 147/174 (84.48%), Postives = 157/174 (90.23%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAFM 174
            MMVLGTAGTGKSYLVYALS LLG  LR AAPTG+A FLIAGSTLHSL RLPVRQG+NLQGQSLK L   L GVKYIIIDELSMVSQ+  AWVDRRLRQGTAVD+PFGGIS+IMTGDL QLQPVGG+PLYKQNP AALN+EGYAAYSLF++VFILDRVQRQTAA ANDDDQR F+
Sbjct: 1143 MMVLGTAGTGKSYLVYALSRLLGGFLRRAAPTGMAAFLIAGSTLHSLLRLPVRQGRNLQGQSLKALQNSLTGVKYIIIDELSMVSQSQMAWVDRRLRQGTAVDKPFGGISLIMTGDLGQLQPVGGTPLYKQNPAAALNVEGYAAYSLFQDVFILDRVQRQTAAAANDDDQRGFI 1316          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: UPI00106C3E43 (ATP-dependent DNA helicase pfh1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C3E43)

HSP 1 Score: 145 bits (365), Expect = 2.340e-39
Identity = 76/161 (47.20%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQ 160
            M+V GTAGTGK+YL+ AL  +L D     A TGIA F I G TLHS  +LP+R+ + LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT  ++ PFGG+SVI+ GD  QL PVG  P+Y     + ++  G++ Y  F  V IL++V RQ
Sbjct:   42 MIVSGTAGTGKTYLISALKQVLQDQCIVTATTGIAAFSIGGQTLHSAAQLPIREYRELQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDVPFGGMSVILMGDFGQLPPVGDRPMYIAGNGSVISDHGHSMYLTFDHVVILEQVMRQ 202          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7GPZ2_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPZ2_PARCT)

HSP 1 Score: 146 bits (369), Expect = 2.420e-37
Identity = 78/175 (44.57%), Postives = 109/175 (62.29%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAFM 174
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT  ++ PFGG+SVI+ GD  QL PVG  P+Y       ++  G++ Y +F+ V ILD+V RQ    A     RA +
Sbjct: 1074 MIVCGTAGTGKTYLISATKQVLAAQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDIPFGGMSVILMGDFGQLPPVGDKPMYVSGNGTIVSDHGHSLYLMFESVIILDQVMRQVGEDAEAVAFRALL 1248          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7GSP4_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GSP4_PARCT)

HSP 1 Score: 146 bits (368), Expect = 3.150e-37
Identity = 78/174 (44.83%), Postives = 109/174 (62.64%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 173
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SMV     +W+D RLR GT  ++ PFGG+S+I+ GD  QL PVG  P+Y       ++  G++ Y +F+ V ILD+V RQ      D +  AF
Sbjct:  489 MIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMVGHKMLSWLDNRLRAGTGKEDIPFGGLSIILMGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAVAF 659          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A7D9IMW0_PARCT (ATP-dependent DNA helicase (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IMW0_PARCT)

HSP 1 Score: 145 bits (367), Expect = 4.320e-37
Identity = 79/174 (45.40%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAV-DEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 173
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT   D PFGG+SVI+ GD  QL PVG  P+Y       ++  G++ Y +F+ V ILD+V RQ      D +  AF
Sbjct:  763 MIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKQDIPFGGMSVILVGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAIAF 933          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7FUF4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FUF4_PARCT)

HSP 1 Score: 145 bits (366), Expect = 5.640e-37
Identity = 77/174 (44.25%), Postives = 109/174 (62.64%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 173
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT  ++ PFGG+S+I+ GD  QL PVG  P+Y       ++  G++ Y +F+ V ILD+V RQ      D +  AF
Sbjct:  349 MIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIRECRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDIPFGGMSIILMGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAVAF 519          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: UPI001068E797 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068E797)

HSP 1 Score: 135 bits (339), Expect = 3.190e-36
Identity = 71/161 (44.10%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQ 160
            M+V GTAGTGK+YL+ AL  +L D     A TGIA F I G TLH   +LP+++ + LQG SL+ L + L G +++II+E+SM+     +W+D RLR GT  ++ PFGG+S+I+ GD  QL  VG  P+Y     + ++  G++ Y  F  V IL++V RQ
Sbjct:   11 MIVSGTAGTGKTYLISALKQVLQDQCIVTATTGIAAFSIGGQTLHFAAQLPIQEYRELQGDSLQRLQLRLEGKRFLIINEMSMIGHKMLSWLDNRLRAGTGKEDVPFGGMSIILMGDFGQLPAVGDRPMYIAGNGSVISDHGHSMYLTFDYVVILEQVMRQ 171          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A1X7U1S2_AMPQE (ATP-dependent DNA helicase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U1S2_AMPQE)

HSP 1 Score: 136 bits (343), Expect = 4.510e-36
Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQG-KNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDEP--FGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQT 161
            ++V GTAGTGKSYL+  L  LLG  L+ AAPTG+A F+I G TLHSL  LPVR   K+++G +L+ +   L+  KY+IIDE+SMVS+  F  +DRRLRQ         FGG SV++  D  QL PV G PLY    ++    +GY AYS F   F L +V RQ+
Sbjct:  134 IIVNGTAGTGKSYLINCLRLLLGTSLKVAAPTGVAAFIIEGRTLHSLLHLPVRGDFKDMEGINLQNIQEELSSTKYLIIDEMSMVSKKTFGMIDRRLRQAFPHKSQVLFGGCSVLLFEDFGQLLPVFGLPLYTTQSSSDFADQGYRAYSQFTSSFTLTQVMRQS 297          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7I194_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT)

HSP 1 Score: 142 bits (359), Expect = 5.360e-36
Identity = 78/175 (44.57%), Postives = 107/175 (61.14%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAV-DEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAFM 174
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT   D  FGG+SVI+ GD  QL PVG  P+Y      A++  G++ Y +F+ V ILD+V RQ          RA +
Sbjct: 1294 MIVCGTAGTGKTYLISATKQVLAAQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKQDIHFGGMSVILMGDFGQLPPVGDKPMYVSGNGRAVSDHGHSLYLMFESVVILDQVMRQAGEDRESIAFRALL 1468          
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7JTH8_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JTH8_PARCT)

HSP 1 Score: 142 bits (357), Expect = 9.630e-36
Identity = 78/174 (44.83%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    1 MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAV-DEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 173
            M+V GTAGTGK+YL+ A   +L       A TGIA F I G TLHS  +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+     +W+D RLR GT   D  FGG+SVI+ GD  QL PVG  P+Y       ++  G++ Y +F+ V ILD+V RQ      D +  AF
Sbjct:  951 MIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQVRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKQDILFGGMSVILMGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAIAF 1121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L976_9PHAE1.100e-8684.48ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
UPI00106C3E432.340e-3947.20ATP-dependent DNA helicase pfh1-like n=1 Tax=Dendr... [more]
A0A6S7GPZ2_PARCT2.420e-3744.57ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A6S7GSP4_PARCT3.150e-3744.83ATP-dependent DNA helicase n=2 Tax=Paramuricea cla... [more]
A0A7D9IMW0_PARCT4.320e-3745.40ATP-dependent DNA helicase (Fragment) n=1 Tax=Para... [more]
A0A6S7FUF4_PARCT5.640e-3744.25ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
UPI001068E7973.190e-3644.10ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendr... [more]
A0A1X7U1S2_AMPQE4.510e-3648.78ATP-dependent DNA helicase n=1 Tax=Amphimedon quee... [more]
A0A6S7I194_PARCT5.360e-3644.57ATP-dependent DNA helicase n=3 Tax=Paramuricea cla... [more]
A0A6S7JTH8_PARCT9.630e-3644.83ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 2..171
e-value: 1.8E-22
score: 80.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..140
e-value: 1.2E-20
score: 75.6
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 3..150
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 3..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..183
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:2279923..2280474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4411.1mRNA_P-fluviatile_contig20.4411.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig20 2279911..2280787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig20.4411.1 ID=prot_P-fluviatile_contig20.4411.1|Name=mRNA_P-fluviatile_contig20.4411.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=184bp
MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRL
PVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGT
AVDEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKE
VFILDRVQRQTAAGANDDDQRAFMTCCRVLVID*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase