mRNA_P-fluviatile_contig20.4411.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 296 bits (758), Expect = 7.690e-88 Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAFM 534
EPLRMMVLGTAGTGKSYLVYALS LLG LR AAPTG+A FLIAGSTLHSL RLPVRQG+NLQGQSLK L L GVKYIIIDELSMVSQ+ AWVDRRLRQGTAVD+PFGGIS+IMTGDL QLQPVGG+PLYKQNP AALN+EGYAAYSLF++VFILDRVQRQTAA ANDDDQR F+
Sbjct: 1139 EPLRMMVLGTAGTGKSYLVYALSRLLGGFLRRAAPTGMAAFLIAGSTLHSLLRLPVRQGRNLQGQSLKALQNSLTGVKYIIIDELSMVSQSQMAWVDRRLRQGTAVDKPFGGISLIMTGDLGQLQPVGGTPLYKQNPAAALNVEGYAAYSLFQDVFILDRVQRQTAAAANDDDQRGFI 1316
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: UPI00106C3E43 (ATP-dependent DNA helicase pfh1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C3E43) HSP 1 Score: 151 bits (382), Expect = 2.160e-40 Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQ 492
EPL M+V GTAGTGK+YL+ AL +L D A TGIA F I G TLHS +LP+R+ + LQG SL+ L + L G +++IIDE+SM+ +W+D RLR GT ++ PFGG+SVI+ GD QL PVG P+Y + ++ G++ Y F V IL++V RQ
Sbjct: 38 EPLHMIVSGTAGTGKTYLISALKQVLQDQCIVTATTGIAAFSIGGQTLHSAAQLPIREYRELQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDVPFGGMSVILMGDFGQLPPVGDRPMYIAGNGSVISDHGHSMYLTFDHVVILEQVMRQ 202
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 150 bits (379), Expect = 8.210e-38 Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = 3
Query: 525 GLHDLLPRARDRLICQEDWELLLKRQPNNLTAAEKAEFEDATRLFFSKREVQKYNGNKLRELGEPVARFFAVHSGANSRKATADTAEGLQRDPYLAK 815
G +LLPRARD +C EDW+LLLKRQPN LTAAEKA FEDATRLF+SK+EV KYNG KLREL PVAR AVH+GAN+R+ATADTAEGL+RD YLAK
Sbjct: 237 GFIELLPRARDGQLCDEDWDLLLKRQPNRLTAAEKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAK 333
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7GSP4_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GSP4_PARCT) HSP 1 Score: 151 bits (382), Expect = 1.400e-37 Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 531
EP+ M+V GTAGTGK+YL+ A +L A TGIA F I G TLHS +LP+R+ ++LQG SL+ L + L G +++IIDE+SMV +W+D RLR GT ++ PFGG+S+I+ GD QL PVG P+Y ++ G++ Y +F+ V ILD+V RQ D + AF
Sbjct: 485 EPVHMIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMVGHKMLSWLDNRLRAGTGKEDIPFGGLSIILMGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAVAF 659
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7GPZ2_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPZ2_PARCT) HSP 1 Score: 151 bits (381), Expect = 2.090e-37 Identity = 80/179 (44.69%), Postives = 112/179 (62.57%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAFM 534
EP+ M+V GTAGTGK+YL+ A +L A TGIA F I G TLHS +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+ +W+D RLR GT ++ PFGG+SVI+ GD QL PVG P+Y ++ G++ Y +F+ V ILD+V RQ A RA +
Sbjct: 1070 EPVYMIVCGTAGTGKTYLISATKQVLAAQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDIPFGGMSVILMGDFGQLPPVGDKPMYVSGNGTIVSDHGHSLYLMFESVIILDQVMRQVGEDAEAVAFRALL 1248
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: UPI001068E797 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068E797) HSP 1 Score: 141 bits (356), Expect = 2.580e-37 Identity = 74/165 (44.85%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQ 492
EPL M+V GTAGTGK+YL+ AL +L D A TGIA F I G TLH +LP+++ + LQG SL+ L + L G +++II+E+SM+ +W+D RLR GT ++ PFGG+S+I+ GD QL VG P+Y + ++ G++ Y F V IL++V RQ
Sbjct: 7 EPLHMIVSGTAGTGKTYLISALKQVLQDQCIVTATTGIAAFSIGGQTLHFAAQLPIQEYRELQGDSLQRLQLRLEGKRFLIINEMSMIGHKMLSWLDNRLRAGTGKEDVPFGGMSIILMGDFGQLPAVGDRPMYIAGNGSVISDHGHSMYLTFDYVVILEQVMRQ 171
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A7D9IMW0_PARCT (ATP-dependent DNA helicase (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IMW0_PARCT) HSP 1 Score: 150 bits (379), Expect = 3.560e-37 Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAV-DEPFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 531
EP+ M+V GTAGTGK+YL+ A +L A TGIA F I G TLHS +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+ +W+D RLR GT D PFGG+SVI+ GD QL PVG P+Y ++ G++ Y +F+ V ILD+V RQ D + AF
Sbjct: 759 EPVYMIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIREYRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKQDIPFGGMSVILVGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAIAF 933
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A1X7U1S2_AMPQE (ATP-dependent DNA helicase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U1S2_AMPQE) HSP 1 Score: 142 bits (357), Expect = 1.080e-36 Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQG-KNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDEP--FGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQT 495
+PL ++V GTAGTGKSYL+ L LLG L+ AAPTG+A F+I G TLHSL LPVR K+++G +L+ + L+ KY+IIDE+SMVS+ F +DRRLRQ FGG SV++ D QL PV G PLY ++ +GY AYS F F L +V RQ+
Sbjct: 130 DPLHIIVNGTAGTGKSYLINCLRLLLGTSLKVAAPTGVAAFIIEGRTLHSLLHLPVRGDFKDMEGINLQNIQEELSSTKYLIIDEMSMVSKKTFGMIDRRLRQAFPHKSQVLFGGCSVLLFEDFGQLLPVFGLPLYTTQSSSDFADQGYRAYSQFTSSFTLTQVMRQS 297
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: UPI00106D42A3 (ATP-dependent DNA helicase PIF6-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D42A3) HSP 1 Score: 140 bits (353), Expect = 1.130e-36 Identity = 74/165 (44.85%), Postives = 104/165 (63.03%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQ 492
EPL M+V GTAGTGK+YL+ AL +L D A TGIA F I G TLHS +L +++ + LQG SL+ LH+ L G +++IIDE+SM+ F+W+D RL GT ++ PFGG+ +I+ GD QL PVG P Y + ++ G++ Y F V I +V +Q
Sbjct: 39 EPLHMIVSGTAGTGKTYLISALKQVLQDQCIVTATTGIAAFSIGGQTLHSAAQLQIQEYRELQGNSLQRLHLRLGGKRFLIIDEMSMIGYKMFSWLDNRLCAGTGKEDVPFGGMLIILMGDFGQLPPVGDKPKYIAGNGSVISDHGHSMYLTFDYVVIFKQVMQQ 203
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Match: A0A6S7FUF4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FUF4_PARCT) HSP 1 Score: 148 bits (374), Expect = 1.530e-36 Identity = 78/178 (43.82%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 1 EPLRMMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLPVRQGKNLQGQSLKVLHIPLAGVKYIIIDELSMVSQAHFAWVDRRLRQGTAVDE-PFGGISVIMTGDLCQLQPVGGSPLYKQNPTAALNIEGYAAYSLFKEVFILDRVQRQTAAGANDDDQRAF 531
+P+ M+V GTAGTGK+YL+ A +L A TGIA F I G TLHS +LP+R+ ++LQG SL+ L + L G +++IIDE+SM+ +W+D RLR GT ++ PFGG+S+I+ GD QL PVG P+Y ++ G++ Y +F+ V ILD+V RQ D + AF
Sbjct: 345 KPVYMIVCGTAGTGKTYLISATKQVLATQCVVTATTGIAAFSINGQTLHSAAQLPIRECRDLQGDSLQRLQLRLEGKRFLIIDEMSMIGHKMLSWLDNRLRAGTGKEDIPFGGMSIILMGDFGQLPPVGDKPMYVSGNGTVVSDHGHSLYLMFESVIILDQVMRQ---AGEDPEAVAF 519 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4411.1 >prot_P-fluviatile_contig20.4411.1 ID=prot_P-fluviatile_contig20.4411.1|Name=mRNA_P-fluviatile_contig20.4411.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=184bp MMVLGTAGTGKSYLVYALSGLLGDCLRWAAPTGIAGFLIAGSTLHSLQRLback to top mRNA from alignment at P-fluviatile_contig20:2279911..2280787+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4411.1 ID=mRNA_P-fluviatile_contig20.4411.1|Name=mRNA_P-fluviatile_contig20.4411.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=877bp|location=Sequence derived from alignment at P-fluviatile_contig20:2279911..2280787+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:2279911..2280787+ >mRNA_P-fluviatile_contig20.4411.1 ID=mRNA_P-fluviatile_contig20.4411.1|Name=mRNA_P-fluviatile_contig20.4411.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1104bp|location=Sequence derived from alignment at P-fluviatile_contig20:2279911..2280787+ (Porterinema fluviatile SAG_2381)back to top |