mRNA_P-fluviatile_contig20.4369.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig20.4369.1
Unique NamemRNA_P-fluviatile_contig20.4369.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: D7FLG5_ECTSI (FZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG5_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 4.570e-153
Identity = 200/268 (74.63%), Postives = 229/268 (85.45%), Query Frame = 1
Query:   16 SVHGCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAENPAYDSSGDPVYLRDYFPGQPFRDVEWASGRKPKIICTPSIKGAAPPSLRPWGRRPGFVTALGITAGAGFGVTPVAAAVCSLLLASWPSWQNLI 819
            S  GCYIHG+DIGYCE  LY+DS+FRLAATPFC+S+IKYS CVPKY+PLP SR FPDGRW NN++GIKDAWIEQYYN++VN+RL++E DK+L+K+GIDEYG+ GSPVPRFTDN DCQ AFKAYMCYINFPRCDDD NSLVTCRSACENLMVACQNQ+DMWRCGESQ+FNGY+AE P  DS G+PVYLRD+FPGQPFRDVEWA GR+P+I+CTPSIKGAA PSL+PWGRR          A  GFGV PV AAV  LLLA    W+N++
Sbjct:   50 SSEGCYIHGADIGYCETSLYDDSEFRLAATPFCSSYIKYSTCVPKYDPLPASREFPDGRWVNNTLGIKDAWIEQYYNSIVNNRLEVEADKDLQKQGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDENSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGQPFRDVEWAGGRQPEIVCTPSIKGAAAPSLQPWGRRRRRYNDDKTAARTGFGVVPVVAAVTGLLLAL--CWENVV 315          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A835ZE42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE42_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.760e-80
Identity = 112/229 (48.91%), Postives = 157/229 (68.56%), Query Frame = 1
Query:   16 SVHGCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRC-DDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAENPAYDSSGDPVYLRDYFPGQPFRDVEWASGRK--PKIICTPSIKGAAPPSLRPW 693
            +VHGC + G DIG C   +  D  +RL   PFC  +++Y+AC+PK  PLPPSR+ P GRW+N+++  KD W+ +YY  +V +R+ IE DK L+K G DE+G++G+PVPRF++N DC+ AF+ Y C+ NFPRC ++ G +L+TC SACEN+M+AC+  KD+WRCG S++ NGY  E P    SG   YLRD++PGQPF    +   R+  P  +CTPS+ GAA     PW
Sbjct:   30 TVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTL-LSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPW 257          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A7S3UZ54_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ54_HETAK)

HSP 1 Score: 241 bits (615), Expect = 6.260e-76
Identity = 123/246 (50.00%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   19 VHGCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELR-KKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFN-----GYDAENPAYDSS----------GDPVYLRDYFPGQPFRDVEWASGRKPKIICTPSIKGAAPPSLRPWGRRPG 708
            V GCYI G+D G C+  LY+D D R A  PFC  ++ Y  CVP+ + L PSR++P GRW+N ++  KD WIE+ YN+++  RL  E     R KKG DE+G+KG+   RFT N DCQ A+ AY C+INFPRCD+   SL+TCRSACENLM AC   KDMWRCG+S++FN       D  +P   +S          G P+Y RDYFPGQPFRD E  S   P  ICTP+I+ A     R WG R G
Sbjct:   33 VDGCYIQGTDSGICDSDLYDDIDVREANMPFCYKYVDYIPCVPQEKTLDPSRDYPSGRWYNYTVLTKDNWIEKQYNSILKWRLYEESSDPPRVKKGYDEWGNKGTTTVRFTKNDDCQAAYAAYFCWINFPRCDEQDESLMTCRSACENLMQACGYVKDMWRCGKSEYFNYGGSFNLDESHPEKAASQTAEEEEETGGLPIYYRDYFPGQPFRDYEAKSDGTPIPICTPAIRDAG---ARAWGGRGG 275          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A485LR81_9STRA (Aste57867_24742 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR81_9STRA)

HSP 1 Score: 204 bits (518), Expect = 8.740e-62
Identity = 101/218 (46.33%), Postives = 136/218 (62.39%), Query Frame = 1
Query:   28 CYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAENPAY-DSSGDPVYLRDYFPGQPFRDVEWASGR-KPKIICTPSIKGAAP 675
            C + GSD G C+    E S+F L   PFC   + YS CVPK + L          W+N+S+  KD +I Q Y  +V  R  +E D  L K G+DE+G+KG  VPR+T+N+DCQ AF+ YMC++NFPRCDD G SL+ CRS CEN   AC   KD+WRCG+ QF NGY AE   Y + +G   Y R  FPG PFRD ++++ + +  ++CTPS+  A+P
Sbjct:   18 CRLFGSDTGECQ----EQSEF-LKYMPFCGPLLPYSTCVPKAQTL----------WYNHSVKTKDLFISQMYKKLVTQRELLEADTGLHKAGVDEWGAKGEIVPRYTENVDCQNAFRNYMCWLNFPRCDDAGMSLIMCRSVCENFFKACMQHKDLWRCGDPQFVNGYAAEISTYANQAGVLQYYRYPFPGSPFRDNQFSADKTQALVVCTPSLLNASP 220          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A7S3GVU4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU4_9STRA)

HSP 1 Score: 198 bits (503), Expect = 5.510e-59
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 1
Query:   28 CYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYE-PLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGN-SLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAENPAYDSSGDPVYLRDYFPGQPFRDVEWA-SGRKPKIICTPSIKGAA 672
            CYI G+D G C       + +R    P+C   + Y ACVPK +  LP SR FP GRW N+++ +KD ++E+   T+  +R+ IE ++ LRK G++EYG KG    RF    DC+ AF+ YMC+INFPRCD   + S+ TCRSACEN  ++C  ++ +WRCG+S++FNGY+ E P   + G+  YLR+YFPGQPFR+ +++  G     ICTP+I GAA
Sbjct:   39 CYIAGTDSGECSTSTAVLA-WRQDNMPYCQFSVLYPACVPKEDLELPASREFPMGRW-NSTILMKDKYVERMTETLFIERIAIERNRTLRKAGVNEYGDKGRVRRRFYKKPDCRNAFRNYMCWINFPRCDVARDLSMPTCRSACENFFISCGYERGLWRCGKSKYFNGYEPEKPIISALGNVSYLREYFPGQPFRENKYSPKGNSELQICTPAIDGAA 254          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A6G0W900_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W900_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.820e-58
Identity = 96/214 (44.86%), Postives = 131/214 (61.21%), Query Frame = 1
Query:   25 GCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAE-NPAYDSSGDPVYLRDYFPGQPFRDVEWASGR-KPKIICTPSI 660
            GC I GSD G C     E ++F L   PFC   + Y+ CVP+ + L          W+N+S+  KD ++ Q YN +V  R   E D  L  +G+DE+G+KG  VPR+T+N DCQ A K YMC++NFPRCD+ G SL+ CRS CEN   AC   KD+WRCG+ Q+ NGY AE +   + +G+  Y R  FPG PFRD E+ S + +  ++CTPS+
Sbjct:   62 GCRIFGSDTGECT----EQAEF-LQYMPFCGPLLPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMYNKLVIQRQLYEADASLNSQGVDEWGNKGEIVPRYTENKDCQDALKNYMCWLNFPRCDNAGRSLIMCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTTVNQAGELQYFRYPFPGSPFRDNEFTSDKLEALVVCTPSL 260          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A7S1C8M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8M7_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.210e-57
Identity = 92/219 (42.01%), Postives = 137/219 (62.56%), Query Frame = 1
Query:   25 GCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAE-NPAYDSSGDPVYLRDYFPGQPFRDVEWASGRKPKIICTPSIKGAAPP 678
            GC+I G+D G CE +  ED + R+   PFCA  ++Y ACVP+++ L          + N+++  KD W+ + +  +V+ R + E  +EL+  GI E G +G  V RF +N DC+ A+K +MC++NFPRCD++  S++ CRS CEN M  C+   D++RCG+ +F+ G + E +   D  G P+Y R  +PGQPFRD E+     P  +CTPSIKGAAPP
Sbjct:   57 GCHIQGTDSGVCEDV--EDFELRM---PFCAPIVQYRACVPRFQEL----------FSNHTVRAKDDWVARTFKNIVDLRKQYETSEELQDAGITETGEEGEIVVRFFENPDCESAYKHFMCWLNFPRCDEEDASMILCRSVCENFMETCEYDADLYRCGDPRFYGGLEPEADDILDDDGLPIYWRAMYPGQPFRDNEFDEEDNPIAVCTPSIKGAAPP 260          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A024T935_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T935_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.580e-57
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1
Query:   28 CYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAENPAY-DSSGDPVYLRDYFPGQPFRDVEWASGRKPKI-ICTPSIKGAAP-PSLRPW 693
            C I GSD G C+    E +DF L   PFC   + Y+ CVP+ + L          W+N+S+  KD ++ Q +  ++  R   E D E+ K+G+DE+G+ G  VPR+T+N DCQ AF+ YMC++NFPRCDD G SL+ CRS CEN   AC   KD+WRCG+ Q+ NGY AE   + + +G   Y R  FPG PFRD  + + R   + +CTPS+  AA  P L  W
Sbjct:   29 CRIFGSDTGECK----EQADF-LQYMPFCGPLLPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKMIAQRQIYEADLEMLKQGVDEWGALGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLILCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTFANKAGVLQYYRAPFPGSPFRDNAFTADRLDALPVCTPSLLNAADGPRLAVW 238          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: W4FF43_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF43_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.730e-54
Identity = 94/217 (43.32%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   28 CYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAE-NPAYDSSGDPVYLRDYFPGQPFRDVEWASGRKPKI-ICTPSIKGAA 672
            C I GSD G C+    E SDF L   PFC   + Y+ CVP+ + L          W+N+S+  KD ++ Q +  +V  R   E D  ++  G+DE+G  G  VPR+T+N DCQ AF+ YMC++NFPRCDD G SLV CRS CEN   AC   KD+WRCG+ Q+ +GY AE + + + +G   Y R  FPG PFRD  + + +   + +CTPS+  AA
Sbjct:   22 CRIFGSDTGECK----EQSDF-LQYMPFCGPILPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKIVVQRQLYEADVAMQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTSANMAGVLQYYRAPFPGSPFRDNAFTADKLEALAVCTPSLLNAA 223          
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Match: A0A6A4ZBS8_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBS8_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.980e-53
Identity = 93/217 (42.86%), Postives = 128/217 (58.99%), Query Frame = 1
Query:   28 CYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPKYEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKKGIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDMWRCGESQFFNGYDAE-NPAYDSSGDPVYLRDYFPGQPFRDVEWASGRKPKI-ICTPSIKGAA 672
            C I GSD G C+    E +DF L   PFC   + Y+ CVP+ + L          W+N+S+  KD ++ Q +  +V  R   E D  ++  G+DE+G  G  VPR+T+N DCQ AF+ YMC++NFPRCDD G SLV CRS CEN   AC   KD+WRCG+ Q+ +GY AE +   + +G   Y R  FPG PFRD  + + +   + +CTPS+  AA
Sbjct:   15 CRIFGSDTGECK----EQADF-LQYMPFCGPILPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKIVVQRQLYEADVAMQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTIANMAGVLQYYRAPFPGSPFRDNAFTADKLEALAVCTPSLLNAA 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLG5_ECTSI4.570e-15374.63FZ domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835ZE42_9STRA1.760e-8048.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UZ54_HETAK6.260e-7650.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A485LR81_9STRA8.740e-6246.33Aste57867_24742 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3GVU4_9STRA5.510e-5945.87Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0W900_9STRA3.820e-5844.86FZ domain-containing protein n=1 Tax=Aphanomyces e... [more]
A0A7S1C8M7_9STRA1.210e-5742.01Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A024T935_9STRA4.580e-5743.56FZ domain-containing protein n=1 Tax=Aphanomyces i... [more]
W4FF43_9STRA1.730e-5443.32FZ domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A6A4ZBS8_9STRA1.980e-5342.86FZ domain-containing protein n=1 Tax=Aphanomyces a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:1747549..1751119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score444.5
Seed ortholog evalue3.6e-122
Seed eggNOG ortholog2880.D7FLG5
EggNOG free text desc.Fz domain
EggNOG OGs2CB5P@1,2RXQZ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFrizzled domain
Ec32 orthologEc-17_001260.1
Exons6
Model size825
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4369.1prot_P-fluviatile_contig20.4369.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig20 1747549..1751119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815910.93336-CDS-P-fluviatile_contig20:1747548..17476401622815910.93336-CDS-P-fluviatile_contig20:1747548..1747640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1747549..1747640 +
1693563702.0026097-CDS-P-fluviatile_contig20:1747548..17476401693563702.0026097-CDS-P-fluviatile_contig20:1747548..1747640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1747549..1747640 +
1622815910.9466064-CDS-P-fluviatile_contig20:1747902..17479661622815910.9466064-CDS-P-fluviatile_contig20:1747902..1747966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1747903..1747966 +
1693563702.012152-CDS-P-fluviatile_contig20:1747902..17479661693563702.012152-CDS-P-fluviatile_contig20:1747902..1747966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1747903..1747966 +
1622815910.9613905-CDS-P-fluviatile_contig20:1748443..17485881622815910.9613905-CDS-P-fluviatile_contig20:1748443..1748588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1748444..1748588 +
1693563702.0201387-CDS-P-fluviatile_contig20:1748443..17485881693563702.0201387-CDS-P-fluviatile_contig20:1748443..1748588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1748444..1748588 +
1622815910.9742548-CDS-P-fluviatile_contig20:1749639..17497451622815910.9742548-CDS-P-fluviatile_contig20:1749639..1749745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1749640..1749745 +
1693563702.027783-CDS-P-fluviatile_contig20:1749639..17497451693563702.027783-CDS-P-fluviatile_contig20:1749639..1749745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1749640..1749745 +
1622815910.9892702-CDS-P-fluviatile_contig20:1750128..17503131622815910.9892702-CDS-P-fluviatile_contig20:1750128..1750313Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1750129..1750313 +
1693563702.0366812-CDS-P-fluviatile_contig20:1750128..17503131693563702.0366812-CDS-P-fluviatile_contig20:1750128..1750313Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1750129..1750313 +
1622815911.0010798-CDS-P-fluviatile_contig20:1750886..17511191622815911.0010798-CDS-P-fluviatile_contig20:1750886..1751119Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1750887..1751119 +
1693563702.0462654-CDS-P-fluviatile_contig20:1750886..17511191693563702.0462654-CDS-P-fluviatile_contig20:1750886..1751119Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1750887..1751119 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig20.4369.1

>prot_P-fluviatile_contig20.4369.1 ID=prot_P-fluviatile_contig20.4369.1|Name=mRNA_P-fluviatile_contig20.4369.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=275bp
MGVDLSVHGCYIHGSDIGYCEPLLYEDSDFRLAATPFCASFIKYSACVPK
YEPLPPSRNFPDGRWFNNSMGIKDAWIEQYYNTVVNDRLKIEDDKELRKK
GIDEYGSKGSPVPRFTDNMDCQKAFKAYMCYINFPRCDDDGNSLVTCRSA
CENLMVACQNQKDMWRCGESQFFNGYDAENPAYDSSGDPVYLRDYFPGQP
FRDVEWASGRKPKIICTPSIKGAAPPSLRPWGRRPGFVTALGITAGAGFG
VTPVAAAVCSLLLASWPSWQNLIF*
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mRNA from alignment at P-fluviatile_contig20:1747549..1751119+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig20.4369.1 ID=mRNA_P-fluviatile_contig20.4369.1|Name=mRNA_P-fluviatile_contig20.4369.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3571bp|location=Sequence derived from alignment at P-fluviatile_contig20:1747549..1751119+ (Porterinema fluviatile SAG_2381)
ATGGGGGTCGACTTGTCTGTGCACGGTTGCTATATCCATGGATCAGATAT TGGGTACTGCGAGCCGCTGCTGTACGAAGACAGCGATTTCAGGTATGAGA TGCTGAAGCCTGAATGCACACATCAGCGACTTGGGGTTGCCTTCCGCGCT TGTGTTGGGAGGGGGCGCTCAGACGCCCTTTACACCATAGCGTTAACGGC ACCGCTTCAACTGCTTTGGCAACGCAAATTCCATCCAGCTCGCAAGAGGG TACCCATATATGTACCCTTTGTCAAAAATTCATGGCTCGCCATGCCTCCG GCCGCCAAGTGTGATCACGCCATACTTCTCGCCCCCTGTACCCGCTTTCG GCAGGCTCGCCGCCACGCCGTTTTGCGCCTCGTTTATCAAGTACTCGGCA TGTGTGCCCAAGTATGAGGTGAGTAAATGGAACATGACAAGTTTTATTCC CAGCATAAGAACTGAGCTCAAATATGCCTGAAGCTAGCTGGTGCCGATCC GCCGATGTGCAGAGATCGAACACCTGCAGTGGTTGTGATGTGGTGTTTTG GTTTCTCAAACACCTGGTGGGCGCTTGGACTTCTTTCCAGCTATTAATCG TGACTATTCCACCTGATCCTACAGTATCGACACGATAGACATACACCTTG CCATCGACAAACGGAGTAGTTGTCGCAAGCAAACACGTGGTGCATGAAAC GTTTGAATACCATTTGTTCAAGTCGATCCCAGCGAAAGCTAGCAACGATG CAAATTTGAAATCGAACAATCCATCGATTGGGACCGTTGCAGGAACACGC GTGTTTGTTTGTCATTTGAGTGCTATATTCCTCTGCCTTATTTGGCTCAT GTTCCACTTTGCCTTCATCTATCGCTGTTGCTGGGGACTGCGCAGCCGCT ACCCCCTTCCAGAAATTTCCCCGACGGTCGATGGTTCAACAACTCCATGG GTATCAAGGACGCGTGGATCGAGCAGTACTACAACACCGTCGTCAACGAT CGGCTCAAGATTGAGGACGACAAGGAGCTGCGGAAAAAAGGTTGGTCAGA CAGCATCAGACATTATCCGACCGGCGGACAGGTCTTGCCGCAACAAACCG CAATAACCCTGAATCCGAACCATAGCCCTGATGAGCACAAGGGAGAAGAT GGACTCCCGCATTTCGGATTTCTGTTGGTCGCCAGCGATTCCTTACCCAC GAGGGAGAGGGTGAACTCCTGCTTTGATGTTGTTCGCCAGTTTACGAACA GTCTCCCTGCGCATGGAATTACGTACCGGCGCAGAAAGAGCCAGAGCCCG CCTGGAACACTCATTTTCCCTCAGCGCAATTCCTGGCCCTTCCTCGACTG GCGGCTCTTGATCATACGATAATACCCCGTTTGGTTCAAAGCAAAGCTTG AGTACAATTACTTGGGGCAATGATCTACCCAAGGCACATAAGGATGGAGG AGTGTGTGGAGAACACGGGCTTCGGCAGCGTCGCACTATTACGCGACGCA TTGAAAGGAAAACGAGGGCCTGACAGATGTATTTCTCGAAGAGCTTGCCT GATTATCGGAACCGGAAATTGGAGCAGCTGTGGTGCCACAACACAACCGT ACGCTTAATCCTATCTGACCACCTCAATCCTAAAGCGCTTCGAATCACTT ATGGCCTGGCTTTCAGGCTTCAACCTCTGTAGACTTGGCACGTTTCACAT GCGCACACCGTCTCGTCATTCGCCGTTTGAACACGTGAATCGAACCTCAG AACACCCAGTGGAGAACATTTTTGCATTCGAAGCTGCTGTCTGTGAACTT GTTTCGAAGTGTTTTGACTTCAGCTGCTGCATGTCCTGCTTACGGGCTAA TCCCCATCCTGCGAGCAAAGGTTCAAGGACAAACGTCCTCATTCGGAATC ACAATTTACAGCGTAAATGACCAAAACGAGCGAAATTCGCCACTTCCTGG AGCAAAGTGGGCTTATTTGGGCCATCAAGGAAAGGCGCCAGGATTCTTTG TCTCTTTTTTTGAAACTAGCACAAGATAATGACACAAGTAGCAGGATGGA AATAAACCCTAGCTGCTATGTGGCCAATTTTCTTCCCGCAGGTATCGACG AGTACGGCAGCAAAGGGTCTCCAGTTCCGCGTTTTACTGACAACATGGAC TGCCAAAAGGCTTTCAAGGCCTACATGTGCTACATCAATTTTCCGAGGTT TGGACAAAGACGTTTCCCTCGACGCCAGTAGTTTGGGCAAAGTCCGCTCA TGGTTTAAGTCGGTATACACTTTGAGCAGGCACAAACACCAGCGTGTCGA GGACAGGCTGCTCAACGGCCTCGGAGGGTCTTTCTACATGTTTCTTGCTG AGACGAAGTCAACAACGAAAGTTTGTGTCACAAGGGGAAGGACCTGCGAT TGTCAGCACCCATGATCGCCTTTTCAAGTGACCGGCTGATGAAACACCTG ATGTCCGATACAGGAAGTGAGTATATTGCTCACTTCGTGCATAGATTACC GCCTGTCCGATGGAGCGCCAAAACAAACAAGCAATAGCATACCAGCCCCC CCTCGACGCTTGCCTGAAACATTTCATCAGGTGCGACGACGATGGAAACA GCCTGGTGACGTGCAGGAGCGCTTGCGAGAACCTGATGGTGGCCTGCCAG AACCAGAAGGATATGTGGCGGTGCGGAGAGAGTCAGTTCTTCAACGGCTA CGACGCGGAGAACCCGGCGTACGATTCAAGCGGCGACCCTGTCTATCTCC GAGACTACTTTCCAGGTCAAATACGTCGTCCACTCCGTCACACGTGCCAG GGAGTTGGTCAGATCGTGCTTTGGTCGCATTGCCTCGGAACAATTTTTGT TTCTCCCAGTTGCGAGCTGGGAGACTTGAGGGCTGGTTCATTCCGCCTCG ATACGGGATGATCTGGCCTACCCTTTGCATTTTTCTTGCAAGGTGCTCGA ACCATTGTTTGCGGAGGATTAATCGGCAGCAACACAACTACCCGACTCTG GTTCAGCGTATGTATCGCACGGAGTGACAAACAAGAAGGAACATATGGAG TTTTTGAAATCTCTGACAGCCGATCAAACTCGACTATTATTGGAGCCGCC GCTCGCAGCGTGCCTCTGGAACTACCTTTCGGGAGTCGTTTCAACGGGAT CTCGCCCTCACCTTCACCTCTGACATAAAAAAATTTCTGCCCTTCTCCAG ACTTGAAAAGCAATTGGCTGCATGTCTTCGCAGCTTTTGCTACAATGGAT TCAGCTTCAGCCCGTCCCAACCGATGCCTCACGTGCTTTTCAATCGTGAG CACGTCCTGCCGATGCACGGAATCGCATATACCGACAGGGCAACCGTTTC GAGACGTGGAGTGGGCCAGCGGACGGAAGCCTAAGATCATCTGCACGCCC AGCATAAAGGGAGCCGCCCCGCCGTCGCTGCGACCATGGGGGCGGCGTCC GGGCTTCGTGACGGCGTTGGGGATAACTGCTGGAGCGGGATTCGGGGTCA CACCGGTTGCTGCGGCTGTTTGCAGTCTCCTGCTTGCATCGTGGCCTAGT TGGCAGAATCTGATCTTCTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig20:1747549..1751119+

>mRNA_P-fluviatile_contig20.4369.1 ID=mRNA_P-fluviatile_contig20.4369.1|Name=mRNA_P-fluviatile_contig20.4369.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1650bp|location=Sequence derived from alignment at P-fluviatile_contig20:1747549..1751119+ (Porterinema fluviatile SAG_2381)
ATGGGGGTCGACTTGTCTGTGCACGGTTGCTATATCCATGGATCAGATAT
TGGGTACTGCGAGCCGCTGCTGTACGAAGACAGCGATTTCAGATGGGGGT
CGACTTGTCTGTGCACGGTTGCTATATCCATGGATCAGATATTGGGTACT
GCGAGCCGCTGCTGTACGAAGACAGCGATTTCAGGCTCGCCGCCACGCCG
TTTTGCGCCTCGTTTATCAAGTACTCGGCATGTGTGCCCAAGTATGAGGC
TCGCCGCCACGCCGTTTTGCGCCTCGTTTATCAAGTACTCGGCATGTGTG
CCCAAGTATGAGCCGCTACCCCCTTCCAGAAATTTCCCCGACGGTCGATG
GTTCAACAACTCCATGGGTATCAAGGACGCGTGGATCGAGCAGTACTACA
ACACCGTCGTCAACGATCGGCTCAAGATTGAGGACGACAAGGAGCTGCGG
AAAAAAGCCGCTACCCCCTTCCAGAAATTTCCCCGACGGTCGATGGTTCA
ACAACTCCATGGGTATCAAGGACGCGTGGATCGAGCAGTACTACAACACC
GTCGTCAACGATCGGCTCAAGATTGAGGACGACAAGGAGCTGCGGAAAAA
AGGTATCGACGAGTACGGCAGCAAAGGGTCTCCAGTTCCGCGTTTTACTG
ACAACATGGACTGCCAAAAGGCTTTCAAGGCCTACATGTGCTACATCAAT
TTTCCGAGGTATCGACGAGTACGGCAGCAAAGGGTCTCCAGTTCCGCGTT
TTACTGACAACATGGACTGCCAAAAGGCTTTCAAGGCCTACATGTGCTAC
ATCAATTTTCCGAGGTGCGACGACGATGGAAACAGCCTGGTGACGTGCAG
GAGCGCTTGCGAGAACCTGATGGTGGCCTGCCAGAACCAGAAGGATATGT
GGCGGTGCGGAGAGAGTCAGTTCTTCAACGGCTACGACGCGGAGAACCCG
GCGTACGATTCAAGCGGCGACCCTGTCTATCTCCGAGACTACTTTCCAGG
TGCGACGACGATGGAAACAGCCTGGTGACGTGCAGGAGCGCTTGCGAGAA
CCTGATGGTGGCCTGCCAGAACCAGAAGGATATGTGGCGGTGCGGAGAGA
GTCAGTTCTTCAACGGCTACGACGCGGAGAACCCGGCGTACGATTCAAGC
GGCGACCCTGTCTATCTCCGAGACTACTTTCCAGGGCAACCGTTTCGAGA
CGTGGAGTGGGCCAGCGGACGGAAGCCTAAGATCATCTGCACGCCCAGCA
TAAAGGGAGCCGCCCCGCCGTCGCTGCGACCATGGGGGCGGCGTCCGGGC
TTCGTGACGGCGTTGGGGATAACTGCTGGAGCGGGATTCGGGGTCACACC
GGTTGCTGCGGCTGTTTGCAGTCTCCTGCTTGCATCGTGGCCTAGTTGGC
AGAATCTGATCTTCTAAGGCAACCGTTTCGAGACGTGGAGTGGGCCAGCG
GACGGAAGCCTAAGATCATCTGCACGCCCAGCATAAAGGGAGCCGCCCCG
CCGTCGCTGCGACCATGGGGGCGGCGTCCGGGCTTCGTGACGGCGTTGGG
GATAACTGCTGGAGCGGGATTCGGGGTCACACCGGTTGCTGCGGCTGTTT
GCAGTCTCCTGCTTGCATCGTGGCCTAGTTGGCAGAATCTGATCTTCTAA
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