mRNA_P-fluviatile_contig2.4106.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Match: D8LCR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR1_ECTSI) HSP 1 Score: 778 bits (2010), Expect = 5.430e-265 Identity = 536/966 (55.49%), Postives = 641/966 (66.36%), Query Frame = 1
Query: 16 GLDEAARAMAQECWSVVGVAVDAEVATDMDAGDNPIGPRELSALLRLELAGKVTVDGVLMAVLRGRSLASDTGCLGRLALQLVEGIDAAHTSPMTDPDVLTLVIEELEGVADVIAAAASAPGLGVAGWGRETCLAVEFLTKTLLEGIDEDRRRP----GDA---DDDGDTPGGFSSMTFGNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EAEASVLRWWEIDDAARVPWGVARLLGLLLRRFGQPERTESILHSILVRTLGGPSRLLRFPLAFLEAFPGFFLPSPAAAAAANSALPGLGSNRSGGGRC--GGEVLAPGLWRRAVTAAL--------TSLGVGVSGXXXXXXXXXXXQGRDSAVVSARLALVCFGGGGGDGSIEGGXXXXXXXXXXXXXXXXXXXXXXXRGARSAARLGEEIAQAISALHDSDSSSKLGGERRGCGLCRGVGNE--DGGDCGKDDALAMSTGLSWVGAGTME--PSELAAPTRRGELIAVEALRSLRMLGIGGEIEGVPVGRLLEPVIRREGVCQRAAALACHAWAQCAGAGQLDCSGGSXXXXXXXXTARPPRFMDMKAVKVARVLKEAV--DSDPEKWEDGQ--EGVLLSHGAKAQAASALLSLIKGRHGELAAEVEEFVVEWTQNMKPKERLSTPLPLLLSVTGLLSRPPAHVINLARRPYRWKAVLEVARREGVLLYRHDAVD-----STTMEGKGDISEKDVAMSWATELNTIHDKDCAKETTIDMHPTERACAASHLDLWKRHKLGNLAPFMPDVHADAVLILEDDAKLQPGFLECAKAAMLQAAAFDTNPSKNKVGLKKAWDIIYLGHILPIPIMEGIFHSFMSQKRASEKNSTETFRSNGIESPDTPACPPSKAGGGGAVGAPGAADGTPAXXXXX------------ALGLHVAPVTYAWGLHAYLLTREAAARLVANSPVSAPAD 2775
GLD+ +R +A++C ++ +A A A ++GD +GP+ LSALLRLEL G V+++GVL++ LRGRSL D G LGRLALQL+ GIDAAH SP++DP+VL+LV+EELEG+A+++AA ++ L V GW RET LA+E L++TLL+ +DE++ + GDA D++ D PGG+SSM+FG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EAEA+VL WWE D+ ARVPW VARLLGLLLRR QP+RT+++LH ILVR+LGGP+RL RFPLAFLEAFPG L S AA A + G G + G VLAPGLWRRAV A L XXXXXXXXXXX VVSARL LVCFG EGG +A L ++I QAI +LH + + E GC LCRG G GG CG DDALAMS+GL +V G E P ELA P RGE IAVEA+R+L +LG+G E G PV R L IRR GVCQRAAALACH AQCA AG+ SGG R R +DM+A AR L +A+ DS+ EKWE GQ E V L GA+AQAASALLSL++GR+GE AAE E +VEW Q +KP+ERLS PLPLLLS+T LSRPPAHVINLARRP+RWKAV + ARR+GV L+RH+AVD +++M KG IS+K+VA++WATELNTI+DKDC KETT MHP+ERACAASHLDLW+RH+ LAPFMP+VH DAVLILEDDAKL+PGFLE AKA MLQAAA DT K +GL K WDIIYLGHILP+PIM+GI + ++K A+ N G+E GG A PA XXX ALGL VAPVT+AWGLHAYLLTR AA RL + PVSAPAD
Sbjct: 86 GLDKGSRVLARKCRKLL-LADTAGSAPSSESGDEILGPKGLSALLRLELTGAVSMEGVLVSALRGRSLKRDHGFLGRLALQLLSGIDAAHASPLSDPEVLSLVVEELEGLAEILAAPSTTEQLRVFGWARETRLALELLSETLLDWMDENQAKRSSGVGDAVNGDEENDDPGGYSSMSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQPQRTQAVLHPILVRSLGGPARLRRFPLAFLEAFPGLLLRSSPTAAGAPANGRYWGGQEEDGAKVERGDGVLAPGLWRRAVAAVLFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSARLKLVCFGDVRRGQQREGGGPEE----------------------ETADDLADKILQAIGSLHSNPGAEAKAEEEGGCALCRGAGGGGYSGGACGGDDALAMSSGLVFVARGAKEEFPGELAVPRGRGESIAVEAVRALGLLGVGVESGGFPVLRRLVLAIRRPGVCQRAAALACHVLAQCAAAGRGS-SGGR--------VVRSARGLDMRAANAARALMDALRPDSEAEKWEAGQLDEDVKLPFGARAQAASALLSLLEGRYGESAAESERTIVEWAQRLKPEERLSAPLPLLLSITATLSRPPAHVINLARRPFRWKAVSDSARRQGVWLHRHEAVDWKAVEASSMSAKGWISDKEVALTWATELNTIYDKDCEKETTHVMHPSERACAASHLDLWRRHRDSKLAPFMPEVHPDAVLILEDDAKLEPGFLEAAKATMLQAAAMDTVRKKKSIGLSKEWDIIYLGHILPVPIMDGIARASKTKKNAANGNG-------GVEE------------GGAATDTATXXXXAPAGDXXXXXXXXXXXXXXXALGLVVAPVTFAWGLHAYLLTRPAATRLSNSLPVSAPAD 1000
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Match: A0A6H5KX61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX61_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 1.300e-142 Identity = 255/434 (58.76%), Postives = 297/434 (68.43%), Query Frame = 1
Query: 1537 RLLEPVIRREGVCQRAAALACHAWAQCAGAGQLDCSGGSXXXXXXXXTARPPRFMDMKAVKVARVLKEAV--DSDPEKWEDGQ--EGVLLSHGAKAQAASALLSLIKGRHGELAAEVEEFVVEWTQNMKPKERLSTPLPLLLSVTGLLSRPPAHVINLARRPYRWKAVLEVARREGVLLYRHDAVD-----STTMEGKGDISEKDVAMSWATELNTIHDKDCAKETTIDMHPTERACAASHLDLWKRHKLGNLAPFMPDVHADAVLILEDDAKLQPGFLECAKAAMLQAAAFDTNPSKNKVGLKKAWDIIYLGHILPIPIMEGIFHSFMSQKRASEKNSTETFRSNGIESPDTPACPPSKAGGGGAVGAPGAADGTPAXXXXX------------ALGLHVAPVTYAWGLHAYLLTREAAARLVANSPVSAPAD 2775
R L P IRR GVCQRAAALACH AQCA AG+ G R R +DM A AR L +A+ DS+ EKWE GQ E V L GA+AQAASALLSL++GR+GE AAE E +VEW Q +KP+ERLS PLPLLLS+T LSRPPAHVINLARRP+RWKAV + ARR+GV L+RH+AVD +++M KG IS+K+VA++WATELNTI+DKDC KETT MHP+ERACAASHLDLW+RH+ LAPFMP+VH DAVLILEDDAKL+PGFL+ AKA MLQAAA DT K +GL K WDIIYLGHILP+PIM+GI + ++K A+ N G+E GGGA DG PA ALGL VAPVT+AWGLHAYLLTR AAARL + PVSAPAD
Sbjct: 22 RRLVPAIRRPGVCQRAAALACHVLAQCAAAGRGSSRG---------RAVRSARGLDMFAANAARALMDALRPDSEAEKWEAGQLDEDVKLPFGARAQAASALLSLLEGRYGESAAESERSIVEWAQRLKPEERLSAPLPLLLSITATLSRPPAHVINLARRPFRWKAVSDSARRQGVWLHRHEAVDWKAVEASSMSAKGWISDKEVALTWATELNTIYDKDCEKETTHVMHPSERACAASHLDLWRRHRDSKLAPFMPEVHPDAVLILEDDAKLEPGFLKAAKATMLQAAAMDTVRKKKSIGLSKEWDIIYLGHILPVPIMDGIARASKTKKNAANGNG-------GVEE------------GGGATDTATTTDGAPAGDTAAXXXXXXXXXXXXALGLVVAPVTFAWGLHAYLLTRPAAARLANSLPVSAPAD 427
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Match: A0A6H5LB44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB44_9PHAE) HSP 1 Score: 297 bits (760), Expect = 5.410e-83 Identity = 240/468 (51.28%), Postives = 290/468 (61.97%), Query Frame = 1
Query: 91 ATDMDAGDNPIGPRELSALLRLELAGKVTVDGVLMAVLRGRSLASDTGCLGRLALQLVEGIDAAHTSPMTDPDVLTLVIEELEGVADVIAAAASAPGLGVAGWGRETCLAVEFLTKTLLEGIDEDRRRP----GDA---DDDGDTPGGFSSMTFGNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EAEASVLRWWEIDDAARVPWGVARLLGLLLRRFGQPERTESILHSILVRTLGGPSRLLRFPLAFLEAFPGFFLPSPAAAAAANSALPGLGSNRSGGGRCGGEV------LAPGLWRRAVTAAL----TSLGVGVSGXXXXXXXXXXXQGRDSAVVSARLALVCFGGGGGDGSIEGGXXXXXXXXXXXXXXXXXXXXXXXRGARSAARLGEEIAQAISALHDSDSSSKLGGERRGCGLCRGVGNEDGGD--CGKDDALAMSTGLSWVGAGTME 1425
A +++GD +GP+ LSALLRLEL G V+++GVL++ LRGRSL D G LGRLALQL+ GIDAAH SP++DP+VL+LV+EELEG+A+++AA ++ L GW RET LA+E L++TLL +DE + + GD DD+ D PGG+SSM+FGNSKKXXXXXXXXXXXXXXXXXXXXXXX EAEA+VL WWE D+ ARVPW VARLLGLLLRR Q +RT+++LH ILVR+LGGP+RL RFPLAFLEAFPG L SP AA A + G +R G G +V LAPGLWRRAV A L XXXXXXXXXXX VSARL L+ FG EGG +A L ++I QAI +LH S ++ GE GC LCR CG DDALAMS+GL V G E
Sbjct: 490 APSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSALRGRSLKRDHGFLGRLALQLLSGIDAAHASPLSDPEVLSLVVEELEGLAEILAAPSTTAQLRGYGWARETRLALELLSETLLGWMDEHQAKRYSGVGDTENGDDENDDPGGYSSMSFGNSKKXXXXXXXXXXXXXXXXXXXXXXXGGVGEEEGGDAWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQLQRTQAVLHPILVRSLGGPARLRRFPLAFLEAFPGLLLRSPLTAAGALA----NGRHREGQEEDGAKVDQGDGVLAPGLWRRAVAAVLFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSARLKLMWFGDVRQGQQREGGGPEE----------------------ETADDLADKILQAIGSLHSSPRAAAKAGEEGGCALCRXXXXXXXXXXXCGGDDALAMSSGLVLVARGATE 931
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Match: A0A835Z9V1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V1_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.600e-6 Identity = 57/200 (28.50%), Postives = 81/200 (40.50%), Query Frame = 1
Query: 2191 IDMHPTERACAASHLDLWKRHKLGNLAPFMPD-VHADAVLILEDDAKLQPGFLECAKAAMLQAAAFDTNPSKNKVGLKKAWDIIYLGHILPIPIMEGIFHSFMSQKRASEKNSTETFRSNGIESPDTPACPPSKAGGGGAVGAPGAADGTPAXXXXXALGLHVAPVTYAWGLHAYLLTREAAARLVANSP----VSAPAD 2775
+ M +ERACAASHL LWKR G+L PF + D LILEDDA L P F++ + + G+ D+ ++G+ LP + + + K S + + G++ TP +HV + W HAYLL+RE A RL A P + AP D
Sbjct: 2 VPMTASERACAASHLALWKRLADGDLEPFKCNSTKRDMALILEDDALLSPYFVQRINMLLQHP---------DMAGM----DLCFIGYSLPGAVRHKVKQALEQLKDDSRASQAKR----GVKHGPTP--------------------------------MHV---DFCWQAHAYLLSREGAKRLTARKPHESLIDAPVD 149
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Match: A0A7S3JY73_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY73_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.710e-5 Identity = 54/195 (27.69%), Postives = 87/195 (44.62%), Query Frame = 1
Query: 1813 QAASALLSLIKGRHGELAAEVEEFVVEWTQNMKPKERLSTPLPLLLSVTGLLSRPPAHVINLARRPYRWKAVLEVARREGVLLYRHDAVDSTTMEGKGDISEKDVAMSWATELNTIHDK-DCAKE-----TTIDMHPTERACAASHLDLWKR----HKLGNLAPFMPDVHADAVLILEDDAKLQPGFLECAKAAM 2367
+AASAL + + G + + ++ W ++ P L+ + L RP A +NLA+ R +A+ +A + L R +A D + I V+ W+ +++ K D + T++ M P+ER CAASH++LW + HK VLILEDD L P F + AA+
Sbjct: 571 EAASALAACLNGLENDGSTTA---LLNWAHTTFSSDK-ELPPALMRKLAALQRRPLARFLNLAQATDRQRAMARLALVTNLALERIEAFDGNIVT----IPSSRVSFYWSEAARSLNAKFDTSSRGTQVATSVPMSPSERGCAASHIELWGKAARDHK--------------PVLILEDDIVLAPQFNQRYAAAL 743 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.4106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.4106.1 >prot_P-fluviatile_contig2.4106.1 ID=prot_P-fluviatile_contig2.4106.1|Name=mRNA_P-fluviatile_contig2.4106.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=925bp GDDGDGLDEAARAMAQECWSVVGVAVDAEVATDMDAGDNPIGPRELSALLback to top mRNA from alignment at P-fluviatile_contig2:4338218..4351653- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.4106.1 ID=mRNA_P-fluviatile_contig2.4106.1|Name=mRNA_P-fluviatile_contig2.4106.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13436bp|location=Sequence derived from alignment at P-fluviatile_contig2:4338218..4351653- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:4338218..4351653- >mRNA_P-fluviatile_contig2.4106.1 ID=mRNA_P-fluviatile_contig2.4106.1|Name=mRNA_P-fluviatile_contig2.4106.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5550bp|location=Sequence derived from alignment at P-fluviatile_contig2:4338218..4351653- (Porterinema fluviatile SAG_2381)back to top |