mRNA_P-fluviatile_contig1.344.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.344.1
Unique NamemRNA_P-fluviatile_contig1.344.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: D7FSB0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB0_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 7.650e-99
Identity = 156/206 (75.73%), Postives = 169/206 (82.04%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGGMLRSSLRRSSGSGQKRARSAQDQCTA 618
            RYKCAKC E NKGK E  KR TSFNAWDAGCLRRLP+Y+SKE PFLLTKRSGIEIRMVDRLADDLVHGK FSA+A + +  A+TTKFMVDQLK TSLVN+RR+ S I RS N A TPE+FG FDDSTKY  AV +EH+LRDVW  YFSKLPVLEVDGV WTLEE QHR+M         GMLR SLRRSSGSGQ+RARSAQDQCTA
Sbjct:    4 RYKCAKCAEFNKGKQEVGKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEIRMVDRLADDLVHGKDFSAAAKN-ICQAHTTKFMVDQLKCTSLVNSRRTSSGIFRSANLAKTPERFG-FDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMHE---RFWMGMLRLSLRRSSGSGQERARSAQDQCTA 204
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 7.930e-93
Identity = 142/180 (78.89%), Postives = 154/180 (85.56%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKE PFLLTKRSGIEI MVDRLADDLVHGKGFSA+A + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEE  HR+MQRWDG+ILGG
Sbjct:  152 RYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKN-IRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGG 330
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 3.070e-92
Identity = 137/179 (76.54%), Postives = 150/179 (83.80%), Query Frame = 1 
Query:    4 YKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            YKCAKC E NKGK  AEK  TSFNAWDAGCLRRLP+Y+SKE PFLLTKRSGIEI M+DRLAD LVHGKGFSA   + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A TPE+FGSFDDSTK+  AV +EH+LRDVW  YFSKLPVLEVD VDWTLEE QHR+MQRWDG+ILGG
Sbjct:   12 YKCAKCAEFNKGKQRAEKCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKN-IRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKHGGAVPSEHYLRDVWRLYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGG 189
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 3.160e-92
Identity = 140/180 (77.78%), Postives = 154/180 (85.56%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAKC E NKGK EAEKR TSFNAW AGCLRRLP+Y+SKE PFLLTKRSGIEI MVDRLADDLVHGKGFSA+A + +  A+TTKFMVDQLKYTSLV+ RR+ S I RS N A  PE+FGSFDDSTKY  AV +EH+LRDVW  YFSKLPVLE+D VDWTLEE QHR+MQRWDG+ILGG
Sbjct:  152 RYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKN-ICQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEMDSVDWTLEEYQHRLMQRWDGDILGG 330
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 4.090e-92
Identity = 140/180 (77.78%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAKC E NKGK EAEK  TSFNAWDAGCLRRLP+Y+SKE PFLLTKRSGIEI MV+RLADDLVHGK FSA+A + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LRDVW  YF KLPVLEVD VDWTLEE QHR+MQRWDG+ILGG
Sbjct:  118 RYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKN-IRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGG 296
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5KT01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT01_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 7.140e-89
Identity = 137/180 (76.11%), Postives = 149/180 (82.78%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAK  E NKGK EAE R T  NAWDAGCLRRLP+Y+SKE PFLLTKRSGIEI MVDRLADDLVHGKGFSA+A + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LR V   YFSKLPVLEVD VDWTLEE  HR+MQRWDG+ILGG
Sbjct:   31 RYKCAKGAEFNKGKQEAETRKTRVNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKN-IRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRHVRRFYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGG 209
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 8.190e-89
Identity = 138/180 (76.67%), Postives = 151/180 (83.89%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            R KCAK  E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKE PFLLT+RSGIEI MV RLADDLV GKGFSA+A + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEE QHR+MQRWDG+ILGG
Sbjct:   12 RCKCAKRAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTERSGIEICMVGRLADDLVRGKGFSAAAKNIL-QAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGG 190
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.550e-88
Identity = 140/180 (77.78%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKE PFLLTKRSGIEI MVDRLADDLVHGKGFSA+A + +  A+TTKFMVDQLKYTSLV+ RR+ S I RS N A  PE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEE  HR+MQRWDG+ILGG
Sbjct:   12 RYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKN-IRQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVRRLYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGG 190
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BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 3.340e-81
Identity = 139/205 (67.80%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASA--------HSTVGNAY-----------------TTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEECQHRVMQRWDGEILGG 540
            RYKCAKC + N+GK EAEKR TSFNAWDAGCL+RLP+Y+SKE P LLTKRSGIEIRMVDRLADDLVHGKGFSA+A        H  + +                   TTKFMVDQLKYTSLVN+RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LRDVW  Y+SKLPVLEVDGV WTLEE QHR+MQRWDGE+L G
Sbjct:  152 RYKCAKCAKFNQGKEEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSG 356
[Close]
BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Match: A0A6H5KNK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK9_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 1.680e-78
Identity = 123/159 (77.36%), Postives = 134/159 (84.28%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNARRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVD 477
            RYKCAKC E N+GK EAEKR TSFNAWDAGCLRRLP+Y+SKE  FLLTKRSGIEI MVDRLADDLVHGKGFSA+A + +  A+TTKFMVDQLKYTSLVN RR+ S I RS N A  PE+FGSFDDSTKY  AV +EH+LRDVW  YFSKLPVLEVD VD
Sbjct:   78 RYKCAKCAEFNEGKQEAEKRKTSFNAWDAGCLRRLPEYMSKEFHFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKN-IRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDSVD 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSB0_ECTSI7.650e-9975.73Uncharacterized protein n=4 Tax=Ectocarpus silicul... [more]
A0A6H5L7G9_9PHAE7.930e-9378.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA7_9PHAE3.070e-9276.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP4_9PHAE3.160e-9277.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX0_9PHAE4.090e-9277.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT01_9PHAE7.140e-8976.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4A9_9PHAE8.190e-8976.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTU1_9PHAE2.550e-8877.783'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JQG2_9PHAE3.340e-8167.803'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KNK9_9PHAE1.680e-7877.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4160842..4161618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.9
Seed ortholog evalue5.4e-30
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size618
Cds size618
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.344.1prot_P-fluviatile_contig1.344.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4160842..4161618 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815324.7148716-CDS-P-fluviatile_contig1:4160841..41612161622815324.7148716-CDS-P-fluviatile_contig1:4160841..4161216Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4160842..4161216 -
1693561499.2525263-CDS-P-fluviatile_contig1:4160841..41612161693561499.2525263-CDS-P-fluviatile_contig1:4160841..4161216Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4160842..4161216 -
1622815324.724837-CDS-P-fluviatile_contig1:4161282..41612981622815324.724837-CDS-P-fluviatile_contig1:4161282..4161298Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4161283..4161298 -
1693561499.272732-CDS-P-fluviatile_contig1:4161282..41612981693561499.272732-CDS-P-fluviatile_contig1:4161282..4161298Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4161283..4161298 -
1622815324.735103-CDS-P-fluviatile_contig1:4161391..41616181622815324.735103-CDS-P-fluviatile_contig1:4161391..4161618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4161392..4161618 -
1693561499.2839053-CDS-P-fluviatile_contig1:4161391..41616181693561499.2839053-CDS-P-fluviatile_contig1:4161391..4161618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4161392..4161618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.344.1

>prot_P-fluviatile_contig1.344.1 ID=prot_P-fluviatile_contig1.344.1|Name=mRNA_P-fluviatile_contig1.344.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=206bp
RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKESPFLLTKR
SGIEIRMVDRLADDLVHGKGFSASAHSTVGNAYTTKFMVDQLKYTSLVNA
RRSGSSILRSVNPAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKL
PVLEVDGVDWTLEECQHRVMQRWDGEILGGMLRSSLRRSSGSGQKRARSA
QDQCTA
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mRNA from alignment at P-fluviatile_contig1:4160842..4161618-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.344.1 ID=mRNA_P-fluviatile_contig1.344.1|Name=mRNA_P-fluviatile_contig1.344.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=777bp|location=Sequence derived from alignment at P-fluviatile_contig1:4160842..4161618- (Porterinema fluviatile SAG_2381)
AGGTACAAGTGTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGC
GGAGAAGCGCGCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGAC
GTCTTCCGGACTACGTCTCGAAGGAATCCCCTTTCCTTCTCACGAAGCGA
TCGGGCATTGAGATTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCA
TGGGAAGGGCTTCTCCGCTTCTGCGCAGTATATTCGCCAGCTGAATTTGC
AGCGTCTCAGAGGACGGGCTGGTCTTTGCTTTTCTCTCCTGTTCACAACG
TTTTCTGATGGTACCGCAAGCTCTACCGTAGGAAATGTCGGACCTCATAA
GCGCCGACCCGTGCTACAACGAAAACGTGTCGTCCTCATAATGCTGTTGC
AGGCGTACACGACCAAGTTCATGGTGGACCAGCTCAAGTACACCTCTCTG
GTCAACGCCCGGCGGTCCGGCTCATCAATCTTGCGCTCGGTCAACCCAGC
CGCAACCCCAGAGAAGTTCGGCAGCTTCGATGACTCGACGAAGTACTGCG
TTGCGGTCCTGACGGAGCATTTTTTGCGGGACGTGTGGCACGCGTATTTC
TCTAAACTCCCCGTGCTGGAGGTGGATGGCGTGGATTGGACGCTGGAGGA
GTGTCAGCACCGCGTGATGCAGCGCTGGGACGGAGAGATTCTGGGTGGGA
TGCTTCGTTCAAGTTTGCGAAGATCATCCGGCTCGGGGCAAAAGCGGGCG
AGGAGCGCACAAGACCAGTGTACGGCA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4160842..4161618-

>mRNA_P-fluviatile_contig1.344.1 ID=mRNA_P-fluviatile_contig1.344.1|Name=mRNA_P-fluviatile_contig1.344.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1236bp|location=Sequence derived from alignment at P-fluviatile_contig1:4160842..4161618- (Porterinema fluviatile SAG_2381)
AGGTACAAGTGTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGC
GGAGAAGCGCGCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGAC
GTCTTCCGGACTACGTCTCGAAGGAATCCCCTTTCCTTCTCACGAAGCGA
TCGGGCATTGAGATTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCA
TGGGAAGGGCTTCTCCGCTTCTGCGCAAGGTACAAGTGTGCGAAGTGCGT
GGAGTGCAACAAAGGCAAGACGGAGGCGGAGAAGCGCGCGACGAGCTTCA
ATGCGTGGGACGCTGGGTGCCTCCGACGTCTTCCGGACTACGTCTCGAAG
GAATCCCCTTTCCTTCTCACGAAGCGATCGGGCATTGAGATTCGCATGGT
GGACCGGCTTGCAGATGATTTGGTGCATGGGAAGGGCTTCTCCGCTTCTG
CGCACTCTACCGTAGGAAATCTCTACCGTAGGAAATGCGTACACGACCAA
GTTCATGGTGGACCAGCTCAAGTACACCTCTCTGGTCAACGCCCGGCGGT
CCGGCTCATCAATCTTGCGCTCGGTCAACCCAGCCGCAACCCCAGAGAAG
TTCGGCAGCTTCGATGACTCGACGAAGTACTGCGTTGCGGTCCTGACGGA
GCATTTTTTGCGGGACGTGTGGCACGCGTATTTCTCTAAACTCCCCGTGC
TGGAGGTGGATGGCGTGGATTGGACGCTGGAGGAGTGTCAGCACCGCGTG
ATGCAGCGCTGGGACGGAGAGATTCTGGGTGGGATGCTTCGTTCAAGTTT
GCGAAGATCATCCGGCTCGGGGCAAAAGCGGGCGAGGAGCGCACAAGACC
AGTGTACGGCAGCGTACACGACCAAGTTCATGGTGGACCAGCTCAAGTAC
ACCTCTCTGGTCAACGCCCGGCGGTCCGGCTCATCAATCTTGCGCTCGGT
CAACCCAGCCGCAACCCCAGAGAAGTTCGGCAGCTTCGATGACTCGACGA
AGTACTGCGTTGCGGTCCTGACGGAGCATTTTTTGCGGGACGTGTGGCAC
GCGTATTTCTCTAAACTCCCCGTGCTGGAGGTGGATGGCGTGGATTGGAC
GCTGGAGGAGTGTCAGCACCGCGTGATGCAGCGCTGGGACGGAGAGATTC
TGGGTGGGATGCTTCGTTCAAGTTTGCGAAGATCATCCGGCTCGGGGCAA
AAGCGGGCGAGGAGCGCACAAGACCAGTGTACGGCA
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