prot_P-fluviatile_contig1.341.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.341.1
Unique Nameprot_P-fluviatile_contig1.341.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length964
Homology
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A6H5KAM3_9PHAE (ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM3_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 5.840e-114
Identity = 330/808 (40.84%), Postives = 397/808 (49.13%), Query Frame = 0
Query:  199 VRSTARVPIGGYPGSG-TSIITLREFQAEAAEQQQDGLGIAAMNF------RDAAEEKVFMEARWKSE---STSQGWTSGSTASMRSRSSS-----LPPSLAHPLMAKPPVRGFHLVDLHAVVRNAVEWKHCLPKVEPCFRVSSNRDGVLLGLVHALGGRLSCSSAHDISAGSGAARRANPLPAPPPRLLDHHVCRSPTLLRASVAAGVQLYEVDSADEWGRIHAAREKHGSVGAGSIREIAYGCSRTTAANARRASDAGPAGVVVRLAMP-----QLPGDSTSAYAAADMPGYLEAVYGASAEDVVELVHAAMDA-----------AVGGEGRSKATASPWNDSSGGC-SLPIVGFSIDVGAACWDDAFASGGAAQPSSGPGRPDGSGPTSVAATGGTGAASNEAVPSTTLAESIDAAVAFAVKMAGIAAEAVAAAC-----------IARTAASAVAEEGPNGQELTATSDGXXXXXXRSITPPLSPSSRSPPPFSFRRLHVTGLGKGGARGEPLSALKAALSRHLSTAGCAGTTRIPGSSIESDGGSGLAWGPNAPANRLVLVSADATEHLIAAGVCSTVASIIGRKSITPLAADVRDDSATMRPPPPEECGVAG-----AGGDEGCCPVQE------GTTEG-----DPGGTMYYIDDGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGETSAFSSHDGYRARAAAALKPPDARELPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEAARSPV 947
            V S+  VP  G+   G T   +L+    +A E+QQ    +   N        D  E  V   +  K E   S++  + S        RSS        P L  P  A PPVRGFHLVDLHAVVRN+VEW +CLP                                                                              +VDS DEW RI+A R K G+      R         T     RA+   PA V+VRLAMP     Q P + ++  A AD    LEA+YGAS++DVVEL  A                VG E  +   AS    S G   +LPIVGFSIDVG+ACW+DA    G++ PSSG   PD S  TS ++  G        V S  LAESIDAAVAFAV+MA IAA A                +A TAA+   EE     E    S        +  TP LS  +  PPPFSFRRLHVTGLG+GGARGEPL+ALKAALSRHL  A  A T  + G+  +   GS  A    A A   ++VSADATEHL+A+GV STVASIIGRK++ P A D  DD A  R P   +          AG   G    +E      G T G     D GG MYY+DDGCYGSLSGALLRG QM+P  LRVR P      D+S  P T+   A+       + H    + A A  +     ELPC VWGPTCDGLDCVCR T+LP+D+EPGRDWLFFPDVGIRGGAD T FNGL+PL+++Y +R   +AA  PV
Sbjct:    4 VDSSEGVPRRGWRAEGRTPTASLKTHPPQAVERQQQQWQLGKNNTVSQHRGEDVEETAVEESSAGKEELHQSSTNAYHSAMVNGSTDRSSDNTGRRASPPLTQPPSAMPPVRGFHLVDLHAVVRNSVEWSYCLP------------------------------------------------------------------------------QVDSVDEWHRIYATRRKLGATPYVWSRSGTSLDPTQTTPRHSRATGLSPASVMVRLAMPLQPRRQFPENPSATPADADFSEALEAIYGASSDDVVELAQAXXXXXXXXXXXXXXXTVGPELGAGTAASK---SCGSLRTLPIVGFSIDVGSACWNDALR--GSSDPSSGQQSPDNS-YTSASSVPGV------VVSSGRLAESIDAAVAFAVEMARIAAGAXXXXXXXXAPVSKVDGVADTAANQQDEE----SERVLNSSDSIAGPAKMTTPNLS--AMLPPPFSFRRLHVTGLGEGGARGEPLAALKAALSRHLPIA-AAVTATLGGTHGD---GSASASPSVARACGPIVVSADATEHLVASGVWSTVASIIGRKTVPPAAVD-EDDPAVARSPAATDTDHGSSSSSLAGSANGKARAREQSVVDAGNTCGGKGSDDNGGVMYYVDDGCYGSLSGALLRGTQMRPSALRVR-PAVLIDHDNSAMPPTSSNAASDTRVQCQTDHGPSTSDALAHRRTACRNELPCTVWGPTCDGLDCVCRMTELPNDMEPGRDWLFFPDVGIRGGADVTGFNGLKPLETFYFVRPRGDAATPPV 709          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: D8LN96_ECTSI (Ornithine decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN96_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.190e-77
Identity = 165/316 (52.22%), Postives = 191/316 (60.44%), Query Frame = 0
Query:  649 PPPFSFRRLHVTGLGKGGARGEPLSALKAALSRHLSTAGCA----GTTRIPGSSIESDGGSGLAWGPNAPANRLVLVSADATEHLIAAGVCSTVASIIGRKSITPLAADVRDDSATMRPPPPEECGVAG----AGGDEGCCPVQE-----------GTTEGDPGGTMYYIDDGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGETSAF--SSHDGYRARAAAALKPPDARELPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEAA 943
            PPPFSFRRLHVTGLG+GGARG PL+ALKAALSRHL  A       GTT   GS+  S   +  A GP       ++VSADATEHL+A+GV STVASIIGRK++ P A D                        AGG  G  P +E           G    D GG MYY+DDGCYGSLSGALLRG QM+P  LRVR   P    D     ++  +  AA ET     + H    + A A  +     ELPC VWGPTCDGLDCVCR TQLPDD+EPGRDWLFFPDVGIRGGAD T FNGL+PL+++Y +R   +AA
Sbjct:    3 PPPFSFRRLHVTGLGEGGARGGPLAALKAALSRHLPIAAAVSATLGTTHGDGSASASPSVA-RACGP-------IVVSADATEHLVASGVWSTVASIIGRKTVPPAAVDEXXXXXXXXXXXXXXXXXXXXXXLAGGTNGKAPAREQGVVDAGDTCGGKGSDDGGGVMYYVDDGCYGSLSGALLRGTQMRPSALRVR---PAVLIDDHNSAMSPTSSNAASETQVHCQTDHGPSTSDALAHCRTACRNELPCTVWGPTCDGLDCVCRMTQLPDDMEPGRDWLFFPDVGIRGGADVTGFNGLKPLETFYFVRPRGDAA 307          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A7S3UWQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWQ0_HETAK)

HSP 1 Score: 79.0 bits (193), Expect = 1.700e-11
Identity = 56/146 (38.36%), Postives = 66/146 (45.21%), Query Frame = 0
Query:  795 TMYYIDDGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGETSAFSSHDGYRARAAAALKPPDAREL-PCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGI-RGGADATHFNGLQPLDSYYCIRQ 938
            T YY+DDGCYGSLSG LL   +              RRR     PV + T  A G                   KP    EL P  VWGPTCDG+DCV +   LP  L  G DW+   DV   R    AT FNGL+  +  YC+ +
Sbjct:  364 TQYYLDDGCYGSLSGLLLDTDK-----------DGRRRR-----PVISTTLDARG-------------------KPLPRTELAPATVWGPTCDGVDCVAKLATLPPSLGAG-DWVVVEDVAAGRPRGRATDFNGLKTAEPVYCLHR 473          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A7S4F6P9_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F6P9_CHRCT)

HSP 1 Score: 79.0 bits (193), Expect = 2.170e-11
Identity = 48/148 (32.43%), Postives = 69/148 (46.62%), Query Frame = 0
Query:  795 TMYYIDDGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGETSAFSSHDGYRARAAAALKPPDARELPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEA 942
            TMYY++DG YGS +  +                      D + P    +     G+T      +G       A KPP      C +WGPTCDG DC+ + T+LPD LE GR WL+FP++G    A  + FNG+   D ++  R + +A
Sbjct:  406 TMYYVNDGLYGSFNNVVY---------------------DHAVPEFKVLPEVGTGDTC-----NGSDGTCRTAAKPPLES---CSIWGPTCDGFDCIVKSTRLPD-LEVGR-WLYFPEMGAYTSAAGSTFNGMPQPDKHFFARAAADA 522          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A2R5GMD3_9STRA (Ornithine decarboxylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMD3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.560e-10
Identity = 59/150 (39.33%), Postives = 73/150 (48.67%), Query Frame = 0
Query:  797 YYIDDGCYGSLSGALLRGVQMQPLPLRVR----VPGPERRRDSSPPPVTAVTPAAAGET-SAFSSHDGYRA-----RAAAALKPPDARELPCK--VWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYY 934
            YYI++G YGS +  +     +Q  PLRVR    V     RR  S        P A G   S FS  D   A      A A +   D  +L C+  VWGPTCDGLDCV + + LP  LE G DW++FPD+G    A A  FNG +     Y
Sbjct:  319 YYINEGVYGSFNNIIYDHATVQGFPLRVRGRRQVEREALRRSGS-----GEDPLAPGAAESDFSDDDEAAAGSSSENAVAFVGEVDGEQL-CEGSVWGPTCDGLDCVLKDSYLPR-LEVG-DWMYFPDMGAYTVAAAAKFNGFEIATKVY 460          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: H8X2A9_CANO9 (Spe1 ornithine decarboxylase n=1 Tax=Candida orthopsilosis (strain 90-125) TaxID=1136231 RepID=H8X2A9_CANO9)

HSP 1 Score: 71.6 bits (174), Expect = 3.460e-9
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  876 LPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQ 928
            L   +WGPTCDGLDCV  K+QL  ++E G DWL+FP++G    A ATHFNG +
Sbjct:  407 LNYSIWGPTCDGLDCVSTKSQLDCEVEVG-DWLYFPNLGAYTSAAATHFNGFE 458          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A7S2DR48_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DR48_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 4.340e-9
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  878 CKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYY 934
            C +WGPTCDGLDC+ +  +LPDDL  G  WL+FP +G    A  ++FNG+   +  Y
Sbjct:  369 CSIWGPTCDGLDCITKNAELPDDLPVGA-WLYFPHMGAYSSAAGSNFNGMPLPEKTY 424          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A7S2MG87_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MG87_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 5.670e-9
Identity = 71/231 (30.74%), Postives = 87/231 (37.66%), Query Frame = 0
Query:  728 HLIAAGVCSTVASIIGRKSITPLAADVRDDSATMRPPPPEECGVAGAGGDEGCCPVQEGT---------TEGDPGGTMYYIDDGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGETSAFSSHDGYRARAAAALKPPDARELPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEAARSPVAA 949
               AA   +  ASIIG+K +              RPPP      A A  +      +EGT         +EG      YYI+DG YGS +  L                           P   V P A G TS               L  P    L C VWGPTCDG+DCV     LPD L  G  WLFFPD+G       ++FNG+   D  Y   +++ AA  P  A
Sbjct:  351 RFFAASTHTLAASIIGKKIVK-----------APRPPPAXXXSDASAEMESASVESKEGTDVNGADDTSSEGVQTRINYYINDGLYGSFNCVLYDHAS----------------------PECEVLPTA-GVTS---------------LVAPPGTPL-CSVWGPTCDGIDCVLADASLPD-LSVGA-WLFFPDMGAYTSCAGSNFNGMSLPDVIYLQSRAQPAAAHPATA 529          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A7TGD1_VANPO (Uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=A7TGD1_VANPO)

HSP 1 Score: 70.1 bits (170), Expect = 1.010e-8
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  868 LKPPDARELPCKV--WGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEA 942
            LK  D  + P KV  WGPTCDGLDC+ ++  L  DLE G DW +FP++G      AT FNG Q       I   K+A
Sbjct:  379 LKKNDVSKYPQKVSIWGPTCDGLDCITKEYYLKHDLEVG-DWFYFPNLGAYTSTAATPFNGFQQHSDTLYINSLKDA 454          
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Match: A0A813A286_9DINO (Odc1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A286_9DINO)

HSP 1 Score: 69.7 bits (169), Expect = 1.520e-8
Identity = 49/140 (35.00%), Postives = 67/140 (47.86%), Query Frame = 0
Query:  797 YYIDDGCYGSLSGALLRGVQMQPLPLRVR-VPGPERRRDSSPPPVTAVTPAAAGETSAFSSHDGYRARAAAALKPPDARE-LPCKVWGPTCDGLDCVCRKTQLPDDLEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYY 934
            YYI+DG YGS +  L     +  +P+  R + G     D +   ++ +T  A G        +         L   +A + LP  VWGPTCDG DCV R+  LP+ L  G DWL F D+G    A  ++FNG  P   YY
Sbjct:  337 YYINDGLYGSFNSLLYDHAHVAAVPISARNLEG--SLEDFA---ISLLTTKAIGPCDIEDDQE--------LLAEAEASDTLPSSVWGPTCDGFDCVFRRILLPE-LNEG-DWLLFEDMGAYTVAATSYFNGFAPPQKYY 461          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAM3_9PHAE5.840e-11440.84ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LN96_ECTSI1.190e-7752.22Ornithine decarboxylase n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UWQ0_HETAK1.700e-1138.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4F6P9_CHRCT2.170e-1132.43Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A2R5GMD3_9STRA3.560e-1039.33Ornithine decarboxylase n=1 Tax=Hondaea fermentalg... [more]
H8X2A9_CANO93.460e-956.60Spe1 ornithine decarboxylase n=1 Tax=Candida ortho... [more]
A0A7S2DR48_9EUKA4.340e-947.37Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2MG87_9EUKA5.670e-930.74Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A7TGD1_VANPO1.010e-845.45Uncharacterized protein n=1 Tax=Vanderwaltozyma po... [more]
A0A813A286_9DINO1.520e-835.00Odc1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002433Ornithine decarboxylasePRINTSPR01182ORNDCRBXLASEcoord: 879..889
score: 72.42
coord: 295..319
score: 29.87
coord: 321..348
score: 31.07
IPR002433Ornithine decarboxylasePANTHERPTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEcoord: 730..943
coord: 278..409
IPR022644Orn/DAP/Arg decarboxylase 2, N-terminalPFAMPF02784Orn_Arg_deC_Ncoord: 304..412
e-value: 1.2E-6
score: 28.1
IPR022643Orn/DAP/Arg decarboxylase 2, C-terminalPFAMPF00278Orn_DAP_Arg_deCcoord: 794..914
e-value: 9.9E-10
score: 38.5
IPR009006Alanine racemase/group IV decarboxylase, C-terminalSUPERFAMILY50621Alanine racemase C-terminal domain-likecoord: 864..939
IPR029066PLP-binding barrelSUPERFAMILY51419PLP-binding barrelcoord: 297..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4133690..4140744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.341.1mRNA_P-fluviatile_contig1.341.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4132250..4140808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.341.1 ID=prot_P-fluviatile_contig1.341.1|Name=mRNA_P-fluviatile_contig1.341.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=964bp
MAPQGAHQRVRKEHVYCKRCSSHGSSSSTYSTSIDDSSEDSRGSPCNSRT
ARRSRAYDNIMRQWELAATLAMPTPRPTHRRVLGGEALPTLKRGESFSLE
TSSTNTSPSWGNLSDTMSPGVQLAWREQLLRLKLSGLAGVPRAVLLRQLG
SRGTGADSPTEVCRVVSACPYLSAQNTALAVIEGTCLDSPLFAPSRSSVR
STARVPIGGYPGSGTSIITLREFQAEAAEQQQDGLGIAAMNFRDAAEEKV
FMEARWKSESTSQGWTSGSTASMRSRSSSLPPSLAHPLMAKPPVRGFHLV
DLHAVVRNAVEWKHCLPKVEPCFRVSSNRDGVLLGLVHALGGRLSCSSAH
DISAGSGAARRANPLPAPPPRLLDHHVCRSPTLLRASVAAGVQLYEVDSA
DEWGRIHAAREKHGSVGAGSIREIAYGCSRTTAANARRASDAGPAGVVVR
LAMPQLPGDSTSAYAAADMPGYLEAVYGASAEDVVELVHAAMDAAVGGEG
RSKATASPWNDSSGGCSLPIVGFSIDVGAACWDDAFASGGAAQPSSGPGR
PDGSGPTSVAATGGTGAASNEAVPSTTLAESIDAAVAFAVKMAGIAAEAV
AAACIARTAASAVAEEGPNGQELTATSDGGGGSSSRSITPPLSPSSRSPP
PFSFRRLHVTGLGKGGARGEPLSALKAALSRHLSTAGCAGTTRIPGSSIE
SDGGSGLAWGPNAPANRLVLVSADATEHLIAAGVCSTVASIIGRKSITPL
AADVRDDSATMRPPPPEECGVAGAGGDEGCCPVQEGTTEGDPGGTMYYID
DGCYGSLSGALLRGVQMQPLPLRVRVPGPERRRDSSPPPVTAVTPAAAGE
TSAFSSHDGYRARAAAALKPPDARELPCKVWGPTCDGLDCVCRKTQLPDD
LEPGRDWLFFPDVGIRGGADATHFNGLQPLDSYYCIRQSKEAARSPVAAA
PPAPSFWAHAVSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002433Orn_de-COase
IPR022644De-COase2_N
IPR022643De-COase2_C
IPR009006Ala_racemase/Decarboxylase_C
IPR029066PLP-binding_barrel