mRNA_P-fluviatile_contig2.3871.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI) HSP 1 Score: 336 bits (862), Expect = 1.210e-111 Identity = 187/232 (80.60%), Postives = 210/232 (90.52%), Query Frame = 3
Query: 45 LSLSRRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREAETLR 740
+ +RRDGR+ANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAK++RME+++GAT+DVSFKPESG +SA +AE+EALLRRSLEEVVLRSRYPR VVSV+IQVI DDG+V+SAALNAATMAL+NAGVEMTGMALSVTCCIT +GRSVLLDPCKAEE +AAA A VATL+ GGGVLSC A G MS+EEYFACCEAA+ GT AVRSFVR+S EQKV REAET+R
Sbjct: 1 MEETRRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSSA--DAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.500e-48 Identity = 114/239 (47.70%), Postives = 150/239 (62.76%), Query Frame = 3
Query: 63 DGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDAST------------GRSVL-LDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREAETLR 740
DGR +QIR L A+QGILNRADGS RF GNTSVL AVYGPA + EK D A ++VS++ + G TSA +AE E +RR+LEE V +RYPR+V+SVV+QV+ DDGSV+SAA+NA MALV+AGVEM GM ++ T C + + + G S L LDP +EE A +A L G+L+ + G + EE FA EAA + AV ++R +VE KV R+ L+
Sbjct: 8 DGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKGAQTSA--DAERELYVRRTLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRDVANLQ 244
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A067CJ13_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ13_SAPPC) HSP 1 Score: 166 bits (421), Expect = 1.450e-45 Identity = 100/222 (45.05%), Postives = 143/222 (64.41%), Query Frame = 3
Query: 57 RRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKR 722
R DGR +IRPLA EQG+LNRADGSARF G TSVLA+V GPA AK R EKA GAT++V+FK E G + A + E E +LR + E +++ +PRAVVS+ +QV+ DDG++++ A+NA +AL++AGV M + ++TC I + + LDP ++E AAA A G+L+ +G++S E+YFAC E + +V +FVR+S E K +
Sbjct: 7 REDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKATGATLEVTFKAEKGAPS--ARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLAVAINAVNLALIDAGVPMRSIVGAITCSILEDG---QLCLDPSRSEGETAAATVTTACCGNNDGILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESKFNK 223
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.390e-45 Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 3
Query: 57 RRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREAE 731
R DGR +IRPL+ EQG+LNRADGSARF G TSVLA+V GPA AK R EK D AT++V FK E G T A + E EA+LR++ E +V YPRAV+S+ +QV+ DDGS+++ A+NA +AL++AG+ M + ++TC I + + LDP + E AAA A G+L+ G++S +YFAC E + +V SFVR+S E K ++ E
Sbjct: 8 RGDGRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFKAEKGAPT--ARDKEYEAILRQTFEPIVYLENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRCLVGAITCSILEDG---QLCLDPARVEGETAAATVTSACAGNNDGILTSLTTGMLSESQYFACSEICRRAVDSVLSFVRISQETKFQKALE 227
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A1V9ZII6_9STRA (Exosome component Rrp46 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZII6_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.160e-44 Identity = 102/229 (44.54%), Postives = 149/229 (65.07%), Query Frame = 3
Query: 39 MSLSLSRR-DGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKR 722
M+ S RR DGR +IRPLA EQG+LNRADGS+RF G TSVLA+V GPA AK R EK AT++V FKPE G ++A + E E +LR++ E ++L +PRAV+SV +QV+ DDG++++ A+NA +AL++AGV M G+ ++TC I + + LDP +E AAA A+ GVL+ +G+++ +YFAC E +G +V +FVR++ E K ++
Sbjct: 1 MASSEDRREDGRLVQEIRPLACEQGLLNRADGSSRFNHGTTSVLASVSGPAAAKLRRQEKMHCATLEVVFKPEKGA--ASARDKEYEMILRQTFEPIILLENFPRAVISVTVQVVEDDGALLAVAINAVNLALLDAGVPMRGIVGAITCTILEDG---QLCLDPSLSEGEAAAATVTTASCGNSDGVLTSMTSGVLTEAQYFACSEICRRGIDSVLAFVRIAQETKFQK 224
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.640e-42 Identity = 98/224 (43.75%), Postives = 139/224 (62.05%), Query Frame = 3
Query: 57 RRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREA 728
R DGR +IRPL+ EQG+LNRADGSARF G+TSVLA+V GPA AK R EK D ATV+V FK + G T A + E EA+L+++ + +V YPRAV+S+ +QV+ DDGS+++ A+NA +AL++AG+ M + ++TC I D + LDP E A A A G+L+ GL++ +YFA E + +V SFVR++ E K ++ A
Sbjct: 10 RDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDKGAPT--ARDKEYEAILKQTFDPIVYVENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSILDDG---QLCLDPSLTEGDAATASVTAAYAGKNDGILTSITTGLVNESQYFAASEICRRAIDSVLSFVRIAQESKFQKNA 228
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.380e-40 Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 3
Query: 57 RRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGG--GVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVK 719
R DGR +IRPL+ EQ +LNRADGSARF G +SVLA+V GPA AK R EK A+++V+FK E G T A + E EA+LR++ E ++ +PRAV+SV +QV+ DDGS++S A+NA +AL++AG+ M + +VTC I D LD EGEAA +A+V + G G+L+ G++S YFAC E + +V SFVR+S E K +
Sbjct: 9 REDGRLVQEIRPLSCEQSLLNRADGSARFSHGTSSVLASVNGPAAAKIRRQEKVSCASLEVTFKAEKGAPT--ARDKEYEAILRQTFEPIIYLENFPRAVISVTVQVVEDDGSLLSVAINAMNLALLDAGIPMRCLVGAVTCSILDDG---QFCLDS-SLTEGEAA-VASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETKFR 224
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A5D6XHQ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHQ5_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.370e-38 Identity = 95/228 (41.67%), Postives = 141/228 (61.84%), Query Frame = 3
Query: 45 LSLSRRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREA 728
++ R DGR N++RPLA+EQG L RADGSAR G+++VL AVYGP AK+ R EK A +DV FK E G +TS E E E ++R++ E VV+ +PRAV+S+V+Q ++S A+NA ++AL++AGV MT + S TC + T + LDP +AEE + ++ A +T VL+ GL++ E+YFAC EA + +V +F R+ ++K + A
Sbjct: 1 MATKRHDGRAGNELRPLASEQGALFRADGSARVAHGSSAVLVAVYGPGQAKSRRSEKLHRAALDVCFKLEKGVLTSK--EKEYEQVIRQTFEPVVVTENFPRAVISIVVQ------HLLSVAINAVSLALLDAGVPMTSVVTSATCGLLPDGT---LFLDPSQAEEELSTSLVTTACSSTSDSVLTSLTNGLLTEEQYFACSEACRRAAESVHAFFRIVQQKKYEANA 217
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA) HSP 1 Score: 155 bits (393), Expect = 8.470e-38 Identity = 94/224 (41.96%), Postives = 141/224 (62.95%), Query Frame = 3
Query: 45 LSLSRR-DGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQK 713
+S+ +R DGR +IRPLA EQG+LNRADGSARF G TSV+A+V GPAPAK R E + AT+DV FK E G T A + E E +LR++ E ++L +PR V+S+ +QV+ DDGS+++ ++NA +AL++AG+ M + ++TC + + S + +DP E A A A +L+ +G+++ E+YFAC E + +V +FVR+S E K
Sbjct: 499 ISMDKREDGRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFKAEKGVAT--ARDKEYELILRQTFEPIILLENFPRTVISITVQVVEDDGSLLAVSINAINLALMDAGIPMRSVVGAITCSVLEDS---QLCIDPSLVENDTATATVTTACSANNHQILTSFTSGILTEEQYFACSEICRRAIDSVIAFVRISQESK 717
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Match: K3WUR4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUR4_GLOUD) HSP 1 Score: 145 bits (367), Expect = 1.060e-37 Identity = 95/230 (41.30%), Postives = 142/230 (61.74%), Query Frame = 3
Query: 39 MSLSLSRRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKAVRMEKADGATVDVSFKPESGGMTSAAAEAETEALLRRSLEEVVLRSRYPRAVVSVVIQVIADDGSVVSAALNAATMALVNAGVEMTGMALSVTCCITDASTGRSVLLDPCKAEEGEAAAIAAVATLTTGGGVLSCRAAGLMSREEYFACCEAAAQGTAAVRSFVRMSVEQKVKREA 728
M+ R DGR N++RP A++QG L RADGSAR GN++VLAAVYGP AK R E + AT+DV FK E G +TS E E E ++R++ E V++ +PRAV+S+V+Q ++S A+NA ++AL++AGV M + S TC + ++ LDP AEE + ++ A +T GVL+ GL++ E+YFAC EA + + +V +F+R+ ++K EA
Sbjct: 1 MTPLTKRHDGRAGNELRPFASDQGALFRADGSARMSHGNSTVLAAVYGPGQAKNRRNEHIEKATLDVCFKLEKGQLTSK--EKEYEQIIRQTFEPVIVADDFPRAVISIVVQ------HLLSVAINAVSLALLDAGVPMLSIVTSATCGLLPDG---NLFLDPSLAEEELSTSLVTTACSSTNDGVLTSLTKGLLTEEQYFACSEACQRASESVHAFLRIVQQKKYPIEA 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3871.1 >prot_P-fluviatile_contig2.3871.1 ID=prot_P-fluviatile_contig2.3871.1|Name=mRNA_P-fluviatile_contig2.3871.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=235bp MSLSLSRRDGRKANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAback to top mRNA from alignment at P-fluviatile_contig2:1867784..1870456+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3871.1 ID=mRNA_P-fluviatile_contig2.3871.1|Name=mRNA_P-fluviatile_contig2.3871.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2673bp|location=Sequence derived from alignment at P-fluviatile_contig2:1867784..1870456+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:1867784..1870456+ >mRNA_P-fluviatile_contig2.3871.1 ID=mRNA_P-fluviatile_contig2.3871.1|Name=mRNA_P-fluviatile_contig2.3871.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1410bp|location=Sequence derived from alignment at P-fluviatile_contig2:1867784..1870456+ (Porterinema fluviatile SAG_2381)back to top |