prot_P-fluviatile_contig2.3746.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig2.3746.1
Unique Nameprot_P-fluviatile_contig2.3746.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length609
Homology
BLAST of mRNA_P-fluviatile_contig2.3746.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 2.050e-134
Identity = 261/453 (57.62%), Postives = 302/453 (66.67%), Query Frame = 0
Query:  127 VVRPGKEARGPFLALVSGLQDALDACPAMPGATLEHSIDDCLRRPAGGAAAWSLGATRKFVGGVLSLVSRSPRSLCQAVVSALVRFVAETGCGFADGSLAGDAE--EHQEPRCRRRCFSCDAAVRTGGSISKGTPDAAQAAAAAERRARPLRCSAQEKRDLVLEGVIRWAVDVHFRQCSSLLQASLNRAVCDGIRRALDAVAAASYSSCGRAPAPSFPLGCRLLLSFVGGLAGDGGAQAALFLRERCWIELRLFASGRRARFTRCARRGSGLGTGIGGRVAVAAAAATGGVVSRRRWPELPVLEAYVGHLCLCRHVSDALAAGHLEWLARQALAILRLLDGPDRASGVGVACPAERLVVGEIAAAAAGLTSISCALALXXXXXXXXXXXXXXXXGRKSTSTVVTEAAGNLLEIVFDSDARPLSGVPVPLAQAAVGALKEAGYLRLARTEDLLR 577
            V++   +  GPFLALVSGLQ ALDACPAMP  TLE SI+DCLRRP+ GAA W+ G+TR FV GVLSLVS SPRSLCQAVVS LVRFVA  GC   D SLA DAE  E Q+ R R RC SC  A+         + +AA   A+   RARP  C+AQEKRDLVLE ++RWAVDVHFRQCS LLQAS+NRAVC G+R+AL     A+  S  +A  PSFPLGCRLLLSFVGGLAGDGGAQ A FLRERC  E+R F +  R R           GT  G R A A  A   GV   RR PELP+L+AYVGHLCLCRHVSD L+A HL WLARQALA+LR+LD P+  +    A P  R    + +   A L S+S ALAL                     S++V E  GNLLEIVFDSD RPLS VP PLA+AA+  LKEAG+L+LAR+++LLR
Sbjct:    4 VIQALLQTNGPFLALVSGLQGALDACPAMPTLTLETSIEDCLRRPSPGAAVWAFGSTRMFVSGVLSLVSSSPRSLCQAVVSVLVRFVAGDGCDTLDDSLALDAEGEETQDRRRRSRCLSCSTAL---------SDNAAGTDASETERARPQCCNAQEKRDLVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQAL----VAAELSRRQASPPSFPLGCRLLLSFVGGLAGDGGAQIAGFLRERCGAEMRRFLTRGRWR--------PPSGTARGRRHADAWTATGRGVA--RRQPELPMLDAYVGHLCLCRHVSDPLSATHLVWLARQALAVLRMLDMPEEGAPGTTAAPERR----QNSNFEAVLASLSHALALLLTRPKRGGVC----------SSIVPETVGNLLEIVFDSDPRPLSCVPRPLAEAAIDVLKEAGHLQLARSDELLR 419          
BLAST of mRNA_P-fluviatile_contig2.3746.1 vs. uniprot
Match: A0A6H5JX00_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX00_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 5.890e-84
Identity = 194/359 (54.04%), Postives = 227/359 (63.23%), Query Frame = 0
Query:  222 DGSLAGDAE--EHQEPRCRRRCFSCDAAVRTGGSISKGTPDAAQAAAAAERRARPLRCSAQEKRDLVLEGVIRWAVDVHFRQCSSLLQASLNRAVCDGIRRALDAVAAASYSSCGRAPAPSFPLGCRLLLSFVGGLAGDGGAQAALFLRERCWIELRLFASGRRARFTRCARRGSGLGTGIGGRVAVAAAAATGGVVSRRRWPELPVLEAYVGHLCLCRHVSDALAAGHLEWLARQALAILRLLDGPDRASGVGVACPAERLVVGEIAAAAAGLTSISCALALXXXXXXXXXXXXXXXXGRKSTSTVVTEAAGNLLEIVFDSDARPLSGVPVPLAQAAVGALKEAGYLRLARTEDLLRP 578
            D SLA +AE  E Q  R R RC SC AA+    S +    DA++   A     RP  CSAQEKRD+VLE ++RWAVDVHFRQCS LLQAS+NRAVC G+R+AL     A+  S  +A  PSFP GCRLLLSFVGGLAGDGGAQ A FLRERC  ELR F +  R R+    R  SG      GR       ATGG V+ R+  E P+L+AYVGHLCLCRHVSD LAA HL WLARQAL +LR+LD P+  +    A  AER      A     L S+S ALAL                     S+ V E AGNLLEIVFDSDARPLS VP PLA+AA+  LKEAG+++LAR+++LLRP
Sbjct:   33 DDSLALEAEGEEAQGTRRRSRCLSCSAAL----SDNPAGTDASETEGA-----RPQCCSAQEKRDVVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQAL----VAAELSMRQASPPSFPPGCRLLLSFVGGLAGDGGAQIAGFLRERCGAELRRFLA--RGRW----RPPSGT---CRGRRHADTCTATGGAVAGRQ-AESPMLDAYVGHLCLCRHVSDPLAATHLAWLARQALTVLRMLDMPEEGAHETTAA-AERRQSSNFADV---LASLSHALALLLTRPKRGGLC----------SSTVPETAGNLLEIVFDSDARPLSCVPRPLAEAAIDVLKEAGHIQLARSDELLRP 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS3_ECTSI2.050e-13457.62F-box, zinc finger protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5JX00_9PHAE5.890e-8454.04F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..485
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 486..505
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 506..608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:826366..830239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.3746.1mRNA_P-fluviatile_contig2.3746.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig2 823958..830239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig2.3746.1 ID=prot_P-fluviatile_contig2.3746.1|Name=mRNA_P-fluviatile_contig2.3746.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=609bp
MEKVEGWERLGQLSRMLQSFRRMYVHREIEEDSPVFLEWRRKLLRFLKGL
LLSCEVQGTRESGDWVHFRFEGTLSKVLGHSCCDWSSPDAFGCGLMLEVL
RALSQVQSELPVCGPAIVHVLLHRLAVVRPGKEARGPFLALVSGLQDALD
ACPAMPGATLEHSIDDCLRRPAGGAAAWSLGATRKFVGGVLSLVSRSPRS
LCQAVVSALVRFVAETGCGFADGSLAGDAEEHQEPRCRRRCFSCDAAVRT
GGSISKGTPDAAQAAAAAERRARPLRCSAQEKRDLVLEGVIRWAVDVHFR
QCSSLLQASLNRAVCDGIRRALDAVAAASYSSCGRAPAPSFPLGCRLLLS
FVGGLAGDGGAQAALFLRERCWIELRLFASGRRARFTRCARRGSGLGTGI
GGRVAVAAAAATGGVVSRRRWPELPVLEAYVGHLCLCRHVSDALAAGHLE
WLARQALAILRLLDGPDRASGVGVACPAERLVVGEIAAAAAGLTSISCAL
ALLLTRPRRGGGGGHGRGGRKSTSTVVTEAAGNLLEIVFDSDARPLSGVP
VPLAQAAVGALKEAGYLRLARTEDLLRPLAPALVKRRPRVLAAAGREASL
VTSVSGHW*
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