prot_P-fluviatile_contig2.3679.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig2.3679.1
Unique Nameprot_P-fluviatile_contig2.3679.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length196
Homology
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BLAST of mRNA_P-fluviatile_contig2.3679.1 vs. uniprot
Match: D8LD01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD01_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.360e-21
Identity = 76/169 (44.97%), Postives = 92/169 (54.44%), Query Frame = 0 
Query:   28 LAAFAMPGQFGCVSAFP--STPLVSSSEG-------RTLRCRPA--CRFRRRRG-----DQVLSLSGEALAIGA-VVAGLTTVAACRGLSALSGAFSLADYRTTSGHDLCLDERLQSKRRKLLHPSDAFPPNASPGAYPVMGVPWSGCAEEGGDVDWREEIWVASLLPD 179
            LAA A    FG  +AF     P +SS  G       R   C PA  C   RRR      +  L+L  EALA+GA V+AG   + A RGLS L+GAF LADYRTTSGHDL LDE+L SKRR+L   S+      + G+    G   +     G + DWREEI +AS LPD
Sbjct:    8 LAALAAGQVFGVANAFHVYPPPTLSSRGGHVEIAPTRPFSCLPAASCGAHRRRSCCGRRELQLALESEALAVGAAVIAGAAIIGAGRGLSTLAGAFKLADYRTTSGHDLRLDEKLGSKRRRLDPSSET-----TSGSLESTGGRGASETALGVETDWREEIRLASQLPD 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD01_ECTSI2.360e-2144.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..195
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:316022..318855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.3679.1mRNA_P-fluviatile_contig2.3679.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig2 315343..318872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig2.3679.1 ID=prot_P-fluviatile_contig2.3679.1|Name=mRNA_P-fluviatile_contig2.3679.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp
MQHTGADQGHHMDLSRMRHCFAIGAFALAAFAMPGQFGCVSAFPSTPLVS
SSEGRTLRCRPACRFRRRRGDQVLSLSGEALAIGAVVAGLTTVAACRGLS
ALSGAFSLADYRTTSGHDLCLDERLQSKRRKLLHPSDAFPPNASPGAYPV
MGVPWSGCAEEGGDVDWREEIWVASLLPDRDNAVVSLGNEEEANP*
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