mRNA_P-fluviatile_contig2.3669.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: D8LCZ6_ECTSI (NYN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ6_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 3.130e-167 Identity = 264/327 (80.73%), Postives = 295/327 (90.21%), Query Frame = 3
Query: 1125 KRKSREVSAKQAKALRTGGRAFLIVCDAESITFHELAESIDILDELGTRDVGVIYADWSKAQDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHEFCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYIDPANRFELLSDEGLVLSVALCIALAAAGQERCDWVRMKTIVNSLHAWDLGLQSPNFYGYPEYDEMVIAMDSYVTGVEDTSGEVVVKVPPKPKAMNGEVPRGLEDVATYLYQKWVSFTKDPRMNDILLACIPACLQALSAARAEMDVAVKRFQRDDEAKLGSPDFLLD 2105
K++ +VSAK+AKALRTGG+AFLIVCDAESIT EL ESIDILDELGTRDVGVIYADW+K QDWRSE+F RSKARDFKLLQR+P+P GSNP GDDTMTAEV+ALA+SEE K+EFCLLSADGSL+ELAA+LR EG VRGVGRRQAP EF++NCD FMYIDPANR+ELL +EGLV+SVALCIALAAAGQERCDWVRMKTIVNSLHAWDLGL+SPN++GY +YDEMV+ MD+YVTGVEDTSGEVVVKVPPKPKA GEVPRGLEDVATYLY KWVSFT +PRMNDILLACIPACLQAL+ AR EMD+AVKRFQ+ L S D+L+D
Sbjct: 264 KQRYGDVSAKRAKALRTGGKAFLIVCDAESITSPELLESIDILDELGTRDVGVIYADWNKTQDWRSELFGRSKARDFKLLQREPLPPGSNPLGDDTMTAEVLALARSEELNKYEFCLLSADGSLSELAAKLRGEGRAVRGVGRRQAPEEFLDNCDTFMYIDPANRYELLDNEGLVISVALCIALAAAGQERCDWVRMKTIVNSLHAWDLGLESPNYFGYSDYDEMVVKMDAYVTGVEDTSGEVVVKVPPKPKA--GEVPRGLEDVATYLYAKWVSFTNEPRMNDILLACIPACLQALAVARGEMDIAVKRFQQGT-LPLESSDYLMD 587
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: UPI00191B5C10 (NYN domain-containing protein n=1 Tax=Psychrobacter sp. H8-1 TaxID=2774129 RepID=UPI00191B5C10) HSP 1 Score: 63.5 bits (153), Expect = 1.960e-6 Identity = 40/140 (28.57%), Postives = 65/140 (46.43%), Query Frame = 3
Query: 1194 IVCDAESITFHELAESIDILDELGTRDVGVIYADWSKA--QDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHEFCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYID 1607
++ DA++ + + +++LG IY DW A Q W+ + + +Q G N D M E + L S+ + FCL+S+D T LA R+R GV+V G G+R F ++CD F Y++
Sbjct: 10 VLIDADNAAAKNIGHILQEIEKLGHITCKKIYGDWGNAHIQSWQEALLKYA----IDPMQHFAYVKGKNAT-DIGMVIEAMDLLYSQRYDG--FCLISSDSDFTSLALRIRKNGVKVFGFGKRSTVDAFAKSCDQFFYVE 142
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: UPI000D69FE90 (NYN domain-containing protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=UPI000D69FE90) HSP 1 Score: 61.6 bits (148), Expect = 2.360e-6 Identity = 56/229 (24.45%), Postives = 98/229 (42.79%), Query Frame = 3
Query: 1167 LRTGGRAFLIVCDAESITFHELAESIDILDELGTRDVGVIYADWSKAQDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHEFCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYIDPANRFELLSDEG-----------LVLSVALCIALAAAGQERCDWVRMKTIVNSLHAWDLGLQSPNFYGYPEYDEMVIAMDSY 1820
+RT A LI DA+++ E + + LG + IY D+S + +S A+ + + T D + + + + SE F F L+S+D T+LA+R+R +G+ V G+G R+AP F+ C+ F+Y++ + E +S + L + L + E WVR+ + + L S YGY ++V A +
Sbjct: 4 VRTDRLAVLI--DADNVPAKHADEIFEEIATLGEAGLRRIYGDFSNGSPLGWDA--KSLAKYAIVPHQQFANTSGKNSSDIALEIDAMDILHSERFGG--FVLVSSDSDFTQLASRIREQGLDVFGIGERKAPKAFVTACNRFIYVENIKKIESVSQQAETAAHQKSKYDLNHAFQLIHNVVRNTDEPDGWVRLGLVGSQLSKIYADFDSRT-YGYKRLSDLVRATGKF 225
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: UPI00191B4AA8 (NYN domain-containing protein n=1 Tax=Psychrobacter fulvigenes TaxID=533323 RepID=UPI00191B4AA8) HSP 1 Score: 62.4 bits (150), Expect = 5.770e-6 Identity = 39/140 (27.86%), Postives = 65/140 (46.43%), Query Frame = 3
Query: 1194 IVCDAESITFHELAESIDILDELGTRDVGVIYADWSKA--QDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHEFCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYID 1607
++ DA++ + + + +++ G IY DW A Q W+ + + +Q G N D M E + L S+ + FCL+S+D T LA R+R GV+V G G+R F ++CD F Y++
Sbjct: 10 VLIDADNASAKNIGHILQEIEKFGHITCKKIYGDWGNAHIQSWQEALLKYA----IDPMQHFAYVKGKNAT-DIGMVIEAMDLLYSQRYDG--FCLISSDSDFTSLALRIRKNGVKVFGFGKRSTVDAFAKSCDQFFYVE 142
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: A0A7U6QN58_9GAMM (HTH OST-type domain-containing protein n=1 Tax=Psychrobacter sp. KH172YL61 TaxID=2517899 RepID=A0A7U6QN58_9GAMM) HSP 1 Score: 58.2 bits (139), Expect = 4.150e-5 Identity = 35/142 (24.65%), Postives = 66/142 (46.48%), Query Frame = 3
Query: 1194 IVCDAESITFHELAESIDILDELGTRDVGVIYADWSKA--QDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHE--FCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYID 1607
++ DA++ + + + + ++ +G +Y DW Q W+ + + DP+ + +G +T +V A H FCL+S+D T LA R+R G++V G G++Q F + CD+F Y++
Sbjct: 8 VLIDADNASANNINYILRKIESIGNVTCKKVYGDWGNVHIQGWQEALLKHAI---------DPIQHFAYAKGKNTTDIGLVIEAMDLLHSGHYDGFCLVSSDSDFTALALRIRKNGIKVFGFGKKQTVKAFTQACDSFYYVE 140
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Match: A0A1D9CXL0_9GAMM (HTH OST-type domain-containing protein n=6 Tax=Psychrobacter TaxID=497 RepID=A0A1D9CXL0_9GAMM) HSP 1 Score: 58.2 bits (139), Expect = 9.240e-5 Identity = 35/142 (24.65%), Postives = 66/142 (46.48%), Query Frame = 3
Query: 1194 IVCDAESITFHELAESIDILDELGTRDVGVIYADWSKA--QDWRSEIFNRSKARDFKLLQRDPVPTGSNPRGDDTMTAEVVALAKSEEFKKHE--FCLLSADGSLTELAARLRAEGVRVRGVGRRQAPTEFIENCDAFMYID 1607
++ DA++ + + + + ++ +G +Y DW Q W+ + + DP+ + +G +T +V A H FCL+S+D T LA R+R G++V G G++Q F + CD+F Y++
Sbjct: 8 VLIDADNASANNINYILRKIESIGNVTCKKVYGDWGNVHIQGWQEALLKHAI---------DPIQHFAYAKGKNTTDIGLVIEAMDLLHSGHYDGFCLVSSDSDFTALALRIRKNGIKVFGFGKKQTVKAFTQACDSFYYVE 140 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3669.1 >prot_P-fluviatile_contig2.3669.1 ID=prot_P-fluviatile_contig2.3669.1|Name=mRNA_P-fluviatile_contig2.3669.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=625bp MRREVVLVLLVGVLRSQAARPRRVPSELAFTVPHPARRWSGGGFTGRVSEback to top mRNA from alignment at P-fluviatile_contig2:190194..199698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3669.1 ID=mRNA_P-fluviatile_contig2.3669.1|Name=mRNA_P-fluviatile_contig2.3669.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9505bp|location=Sequence derived from alignment at P-fluviatile_contig2:190194..199698+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:190194..199698+ >mRNA_P-fluviatile_contig2.3669.1 ID=mRNA_P-fluviatile_contig2.3669.1|Name=mRNA_P-fluviatile_contig2.3669.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3750bp|location=Sequence derived from alignment at P-fluviatile_contig2:190194..199698+ (Porterinema fluviatile SAG_2381)back to top |