mRNA_P-fluviatile_contig2.3667.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: D8LCZ8_ECTSI (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ8_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 4.090e-172 Identity = 254/319 (79.62%), Postives = 282/319 (88.40%), Query Frame = 1
Query: 298 DVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLLAQDESRRNQVALEVKKLRERVDEDXXXXXGSNG---GPYG 1245
DV+KIRR+G+RK+TMVTA DYPS+VHVCRAGIDILLVGDS+GMVELGYDTTQPVTV DMLHHC+AVGRGARTP+VV D+PFGSYEVSP+EALRTAIRFVKEGNVDAVKLEGG+NR +HIRK+VDGGIAVMGHVGLTPQA+SVLGGFRAQGRTAVKAR+V++DALAVQEAGAFAVV+ECVPSPVAKAVTEAL+IPTIGIGAGP +GQVLVYHDMLGMLQHP H QFVPRFCK+YAS+GEEVRRGLE FR+EVE GVFPQ +HSPYKMPAGEE+ F LLA+DE R + KK E DE +G GPYG
Sbjct: 2 DVVKIRRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKMPAGEEQQFKRLLAKDEHERLERLALKKKALEEQDEYETVSKDDDGDVEGPYG 320
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A835Z145_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z145_9STRA) HSP 1 Score: 391 bits (1004), Expect = 1.470e-129 Identity = 200/318 (62.89%), Postives = 241/318 (75.79%), Query Frame = 1
Query: 301 VMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLLAQDESRRNQVA-LEVKKLRERVDEDXXXXXGSNGGPYGGG 1251
V+K+ R+ +RKITMVTA DYPSSVHVC AGIDI LVGDS+GMV LGY+TTQPVTV++MLHHCRAV RGA P++VGD+PFGSYEVSPE+AL+TA RFVKEG VDAVKLEGGR R +HI++IV+GG+AVMGHVGLTPQA+SVLGGFRAQGR+ + QEAGAFAVV+ECVP+ V +A+ +AL+IP IGIGAGP GQVLVYHDMLG+L HP H + P+FCK +A + EV +GL A+R+EVE G FP A HSPY M EE F LLA D R + A L KKL+E+ + + G GG + G
Sbjct: 3 VLKLAREKKRKITMVTAYDYPSSVHVCEAGIDIALVGDSVGMVTLGYETTQPVTVEEMLHHCRAVKRGAAGPLLVGDMPFGSYEVSPEQALQTAYRFVKEGGVDAVKLEGGRTRTEHIKRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRSVI------------QEAGAFAVVLECVPAVVGRAIADALEIPVIGIGAGPHTDGQVLVYHDMLGILSHPHHQRMAPKFCKVFADVQTEVMKGLHAYRREVEAGAFPGAAHSPYAMTPAEEANFEHLLAHDARERREAAELTKKKLKEQDELEAVRLYGQGGGGFAWG 308
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: W7TQW2_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQW2_9STRA) HSP 1 Score: 390 bits (1003), Expect = 1.640e-128 Identity = 198/305 (64.92%), Postives = 243/305 (79.67%), Query Frame = 1
Query: 280 KRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLLAQDE-SRRNQVALEVKKLRE 1191
K+ SV D++ +R+ QR I+MVTA DYPS++HV AGIDI+L GDS+ MVELGYDTTQPV ++ MLHHC+AV RG + ++VGD+PFGSYEVS E A+ A RF+KEG DAVK+EGGR+R + KIV GIAVMGHVGLTPQA+SVLGGFRAQGRTAVKAR +++DALA+QEAGAFAVV+ECVP+PVA+A+TEAL+IPTIGIGAGP GQVLV+HDMLGM HP H FVPRFCK YA +G +R GLE+F+Q+VE G FP +SPYKMPA E AF L+AQD SR+ Q ++L++
Sbjct: 60 KKMSVLDLLHKKRKNQR-ISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQ 363
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A4D9CXI1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXI1_9STRA) HSP 1 Score: 382 bits (981), Expect = 2.300e-126 Identity = 191/285 (67.02%), Postives = 229/285 (80.35%), Query Frame = 1
Query: 340 MVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLLAQDE-SRRNQVALEVKKLRE 1191
MVTA DYPS++HV AGIDI+L GDS+ MVELGYDTTQPV ++ MLHHC+AV RG + ++VGD+PFGSYEVS E A+ A RF+KEG DAVK+EGGR+R + KIV GIAVMGHVGLTPQA+SVLGGFRAQGRTAVKAR +++DALA+QEAGAFAVV+ECVP+PVA+A+TEAL+IPTIGIGAGP GQVLVYHDMLGM HP H FVPRFCK YA +G +R GLE+F+Q+VE G FP +SPYKMPA E AF L+AQD SR+ Q ++L++
Sbjct: 1 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVYHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQ 285
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A7S2FBI3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBI3_9STRA) HSP 1 Score: 372 bits (956), Expect = 2.260e-122 Identity = 186/302 (61.59%), Postives = 237/302 (78.48%), Query Frame = 1
Query: 298 DVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLLAQDESRRNQVALEVKKLRERVDE 1203
+++ ++R+G+R I+MVTA +YPS+V V A ID++LVGDS+GMVELGY+TTQPVT++DMLHH +AV RG ++V DLPFGSYE+SP +AL++A R VKEG DAVKLEGGR+R D R IV GGIAVMGH+GLTPQA+SV+GGFRAQGRT VKAR +L+DALA+Q+AG FA+V+ECVP VA+ +TE+L+IPTIGIGAGP TGQVLVYHDMLGML HP H QFVP+FCK YA +G +R GL+AF+ +V++G+FP + +PYKM EE F L+A+DE R K + DE
Sbjct: 1 ELLAMKRRGKR-ISMVTAYNYPSAVQVDLANIDVVLVGDSVGMVELGYETTQPVTLEDMLHHAKAVKRGVERSLIVVDLPFGSYEISPAQALQSAYRCVKEGGADAVKLEGGRDRADTCRSIVKGGIAVMGHIGLTPQAISVIGGFRAQGRTGVKARALLDDALALQDAGVFALVLECVPPQVAQVITESLEIPTIGIGAGPHTTGQVLVYHDMLGMLSHPHHEQFVPKFCKKYAEVGHAIRFGLDAFKSDVDQGLFPADEFTPYKMSDKEEIKFRELVAEDEGVRQSKLTRASKRLKDADE 301
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A7S2XAE6_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XAE6_9EUKA) HSP 1 Score: 371 bits (952), Expect = 6.330e-121 Identity = 182/287 (63.41%), Postives = 230/287 (80.14%), Query Frame = 1
Query: 277 RKRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQ-HSPYKMPAGEEEAFHLLL 1134
R++ S +++ RR+G+R ITMVTA DYPS++H AGID++LVGDS GMVELGYDTTQPVT+D+MLHH +AV RGA+ P++VGDLPFG+YEVSPE+A RTA RFVKE VD VK+EGGR K+V+GG+AVMGH+GLTPQ +SVLGGFRAQGRTA+KAR +++DALA+++AG FA+VIECVP V +A+TEAL+IPTIGIG+GP TGQVLVYHDMLGM HP + F P+FCK + +GE +R+GLE F++EVE G FP Q HSPYKM E+ F ++
Sbjct: 49 RRKMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDVVLVGDSCGMVELGYDTTQPVTIDEMLHHAKAVVRGAKHPLIVGDLPFGTYEVSPEQAQRTAYRFVKEAGVDCVKMEGGRKMAPFASKVVNGGVAVMGHIGLTPQHISVLGGFRAQGRTAIKARELVDDALALEDAGCFAIVIECVPPQVGEAITEALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKREVESGSFPSLQDHSPYKMSNKEQAMFEEMM 334
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A7S3YF20_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF20_9EUKA) HSP 1 Score: 370 bits (949), Expect = 1.190e-120 Identity = 181/275 (65.82%), Postives = 226/275 (82.18%), Query Frame = 1
Query: 277 RKRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQ-HSPYKM 1098
R++ S +++ RR+G+R ITMVTA DYPS++H AGIDI+LVGDS GMVELGYDTTQPVT+D+M+HH RAV RGA+ P+VVGDLPFGSYEV+PE+A +TA RFVKE VD VK+EGGR +K+V+GG+AVMGHVGLTPQA+SVLGGFRAQGRTA+KAR +++DALA+++AG FAVV+ECVP V +A+T+AL+IPTIGIG+GP TGQVLVYHDMLGM HP + F P+FCK + +GE +R+GLE F++EVE G FP HSPYKM
Sbjct: 54 RRKMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDIVLVGDSCGMVELGYDTTQPVTIDEMMHHARAVVRGAKHPLVVGDLPFGSYEVNPEQAQQTAYRFVKEAGVDCVKMEGGRKMAPFAQKVVNGGVAVMGHVGLTPQAISVLGGFRAQGRTAIKARELVDDALALEDAGCFAVVVECVPPQVGQAITQALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKKEVESGTFPSLDSHSPYKM 327
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: K3W4X2_GLOUD (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W4X2_GLOUD) HSP 1 Score: 362 bits (929), Expect = 1.640e-117 Identity = 183/286 (63.99%), Postives = 225/286 (78.67%), Query Frame = 1
Query: 277 RKRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEEAFHLLL 1134
R++ + D+ ++R+ ++ ITMVTA DYPS+VHV AG DILL+GDSLGMVELG DTT PVT+DDM+HH +AV RGA P+++ D+PFGS E P EAL+ A R +KEG D VK+EGGR R I+ IVDGGIAVMGHVGL PQ +SVLGGFRAQGRTAV+A +++EDALAVQEAGAFAVV+ECVPSPVAK VTE L +PTIGIGAGP +GQVLV+HD+LGMLQHP H Q VP+FCK YA +GE +R GLE +R++VE FP +++PYKM A E E L+
Sbjct: 55 RRKVTTLDLGILKRK-KKPITMVTAYDYPSAVHVDLAGFDILLIGDSLGMVELGMDTTIPVTMDDMIHHTQAVKRGAERPLIIADMPFGSCEGDPYEALKNAQRLLKEGGADCVKIEGGRERAKTIKLIVDGGIAVMGHVGLRPQHISVLGGFRAQGRTAVQAEQIIEDALAVQEAGAFAVVLECVPSPVAKQVTELLRVPTIGIGAGPDTSGQVLVFHDLLGMLQHPHHAQHVPKFCKRYADVGERIRIGLEEYREDVENRRFPSEEYAPYKMSAEETEKLQELV 339
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A7S0H7K8_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H7K8_9EUKA) HSP 1 Score: 361 bits (926), Expect = 2.530e-117 Identity = 180/291 (61.86%), Postives = 230/291 (79.04%), Query Frame = 1
Query: 277 RKRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQ-AQHSPYKMPAGEEEAFHLLLAQDE 1146
R++ S +++ RR+G+ KITMVTA DYPS++H AGIDI+LVGDSLGMVELGY+ T PVT +++LHH +AV RGA+ P+++ DLPFGSYEV P++A +A +FVKE VDAVK+EGGR ++K+VDGGIAVMGHVGLTPQ ++VLGGFRAQGRTA KAR +L+DALA++ AGAFA+VIECVP+ V +A+T AL+IPTIGIGAGP +GQVLVYHDMLGM HP + F P+FCK + +GE +R GLE F++EVE G FP + HSPYKM E+E F +L+ DE
Sbjct: 56 RRKMSALELISRRRKGE-KITMVTAYDYPSALHCDLAGIDIILVGDSLGMVELGYENTLPVTPEELLHHAKAVVRGAKHPLIIADLPFGSYEVDPKQAQESAYKFVKEAGVDAVKMEGGRRLAPTVKKVVDGGIAVMGHVGLTPQHINVLGGFRAQGRTAKKARDLLDDALALEAAGAFAIVIECVPAQVGEAITNALEIPTIGIGAGPGTSGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIREGLECFKKEVETGEFPSFSDHSPYKMSKKEQELFREMLSVDE 345
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Match: A0A024GNC3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNC3_9STRA) HSP 1 Score: 357 bits (916), Expect = 3.010e-116 Identity = 175/280 (62.50%), Postives = 222/280 (79.29%), Query Frame = 1
Query: 277 RKRTSVTDVMKIRRQGQRKITMVTACDYPSSVHVCRAGIDILLVGDSLGMVELGYDTTQPVTVDDMLHHCRAVGRGARTPMVVGDLPFGSYEVSPEEALRTAIRFVKEGNVDAVKLEGGRNRVDHIRKIVDGGIAVMGHVGLTPQAVSVLGGFRAQGRTAVKARRVLEDALAVQEAGAFAVVIECVPSPVAKAVTEALDIPTIGIGAGPFATGQVLVYHDMLGMLQHPDHGQFVPRFCKSYASIGEEVRRGLEAFRQEVEEGVFPQAQHSPYKMPAGEEE 1116
RK+ + TD+ ++R+G + ITM+TA DYPS+VHV AG D+LLVGDSLGMVELG TT PVT+DDM+HHC+AV RGA P+++ DLPFG+ E SP EAL A R +KEG D VK+EGG+ R IR IVD GIAV+GHVGL PQ +SV+GGFRAQGRTA +A +++EDA+A+++AGAFA+VIECVPS VA+ +T+ L+IPTIGIGAGP GQVLV+HD+LGMLQHP H QFVP+FCK YA +G+ +R+GLE +R +VE FP Q++PYKM EEE
Sbjct: 3 RKKVTATDLRVLKRRG-KPITMITAYDYPSAVHVDLAGFDVLLVGDSLGMVELGMSTTLPVTLDDMIHHCKAVKRGATRPLILVDLPFGTCEGSPFEALSNAQRLLKEGGADCVKIEGGQERAKTIRTIVDAGIAVVGHVGLRPQHISVMGGFRAQGRTAEQAEKIIEDAIAIEKAGAFALVIECVPSTVARHITDILEIPTIGIGAGPHTCGQVLVFHDLLGMLQHPHHAQFVPKFCKRYADVGQAIRKGLENYRDDVENHTFPSEQYTPYKMTQEEEE 281 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3667.1 >prot_P-fluviatile_contig2.3667.1 ID=prot_P-fluviatile_contig2.3667.1|Name=mRNA_P-fluviatile_contig2.3667.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=408bp MASTIAASARRKIGQLLSQRGGTQARHRSRSTTNTACGCRRRTSSAAAADback to top mRNA from alignment at P-fluviatile_contig2:181515..186740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3667.1 ID=mRNA_P-fluviatile_contig2.3667.1|Name=mRNA_P-fluviatile_contig2.3667.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5226bp|location=Sequence derived from alignment at P-fluviatile_contig2:181515..186740+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:181515..186740+ >mRNA_P-fluviatile_contig2.3667.1 ID=mRNA_P-fluviatile_contig2.3667.1|Name=mRNA_P-fluviatile_contig2.3667.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2448bp|location=Sequence derived from alignment at P-fluviatile_contig2:181515..186740+ (Porterinema fluviatile SAG_2381)back to top |