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Homology
BLAST of mRNA_P-fluviatile_contig18.3158.1 vs. uniprot
Match: A0A6H5L0X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X6_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.020e-34 Identity = 80/123 (65.04%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 412 DAAAKANQRKSENKRIA-HSSERSLEDKPANWRRVKEAGVTFWINEITGVATDECPHESLRPQGDRKKRSGLLE-DVAGDDRETSAG-LDFGF-GQEEGTGALVYDRTEFEQAMRILDGGLPA 768
+AAA+AN+RKSENKR E S P NWRRVKEAGV FWIN++TGVATDECPHESLRP +KRS E +AGD ET LD F GQEEGTGALVYD +EF+QAMR+LDGGLP+
Sbjct: 14 EAAARANKRKSENKREGMRKVELSPNGDPVNWRRVKEAGVWFWINDVTGVATDECPHESLRPPRAARKRSMPREGSIAGDGSETLLECLDIDFDGQEEGTGALVYDSSEFQQAMRLLDGGLPS 136
BLAST of mRNA_P-fluviatile_contig18.3158.1 vs. uniprot
Match: A0A6H5KZN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN1_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 1.290e-10 Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = -1
Query: 141 RMAESILACRLLMNKTGGFKVLAIGSGALPPNSDPSSSPVRYTILAAY-FCADSPASEK 314
R AES LA RL MNKTGGF+V IGSG +PP PSSS VRY LAAY + ADS AS++
Sbjct: 9 RKAESALAWRLDMNKTGGFRVFPIGSGVVPPKRAPSSSSVRYNRLAAYLWAADSAASDE 67
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-06_000740.1 |
| Exons | 3 |
| Model size | 1568 |
| Cds size | 684 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815755.2249565-UTR-P-fluviatile_contig18:513180..513300 | 1622815755.2249565-UTR-P-fluviatile_contig18:513180..513300 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 513181..513300 + |
| 1693563200.5675864-UTR-P-fluviatile_contig18:513180..513300 | 1693563200.5675864-UTR-P-fluviatile_contig18:513180..513300 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 513181..513300 + |
| 1622815755.32787-UTR-P-fluviatile_contig18:518592..519356 | 1622815755.32787-UTR-P-fluviatile_contig18:518592..519356 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 518593..519356 + |
| 1693563200.884252-UTR-P-fluviatile_contig18:518592..519356 | 1693563200.884252-UTR-P-fluviatile_contig18:518592..519356 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 518593..519356 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815755.2385674-CDS-P-fluviatile_contig18:513300..513498 | 1622815755.2385674-CDS-P-fluviatile_contig18:513300..513498 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 513301..513498 + |
| 1693563200.5777748-CDS-P-fluviatile_contig18:513300..513498 | 1693563200.5777748-CDS-P-fluviatile_contig18:513300..513498 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 513301..513498 + |
| 1622815755.2513168-CDS-P-fluviatile_contig18:516812..516904 | 1622815755.2513168-CDS-P-fluviatile_contig18:516812..516904 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 516813..516904 + |
| 1693563200.587495-CDS-P-fluviatile_contig18:516812..516904 | 1693563200.587495-CDS-P-fluviatile_contig18:516812..516904 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 516813..516904 + |
| 1622815755.260539-CDS-P-fluviatile_contig18:518198..518592 | 1622815755.260539-CDS-P-fluviatile_contig18:518198..518592 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 518199..518592 + |
| 1693563200.603792-CDS-P-fluviatile_contig18:518198..518592 | 1693563200.603792-CDS-P-fluviatile_contig18:518198..518592 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 518199..518592 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3158.1 >prot_P-fluviatile_contig18.3158.1 ID=prot_P-fluviatile_contig18.3158.1|Name=mRNA_P-fluviatile_contig18.3158.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=228bp
MTVGLAAFSEAGESAQKYAARMVYLTGDDEGSLFGGSAPEPMARTLKPPV LFMSRRQARIDSAIREQRANKSPESDPLRGVRGAQAGEKKPLATRRNDAA AKANQRKSENKRIAHSSERSLEDKPANWRRVKEAGVTFWINEITGVATDE CPHESLRPQGDRKKRSGLLEDVAGDDRETSAGLDFGFGQEEGTGALVYDR TEFEQAMRILDGGLPAAQRGSSSSLHP* back to topmRNA from alignment at P-fluviatile_contig18:513181..519356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig18.3158.1 ID=mRNA_P-fluviatile_contig18.3158.1|Name=mRNA_P-fluviatile_contig18.3158.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6176bp|location=Sequence derived from alignment at P-fluviatile_contig18:513181..519356+ (Porterinema fluviatile SAG_2381) GATGGGCGCGCCATCTCGCGCGCACACCAATGGTCAGGCGCTACACAACC
GTTTGCAAGTGACGTGTGATCCGATTCAGCTTGCTGCTGTGTGAGTTTGT
GAGTTTTCTTCGGCCAGAGGATGACGGTGGGTCTCGCCGCCTTTTCAGAG
GCGGGCGAATCCGCACAGAAATACGCCGCGAGAATGGTGTACCTGACGGG
CGATGACGAGGGATCACTGTTTGGCGGCAGTGCGCCAGAGCCGATGGCAA
GGACTTTGAAGCCACCGGTTTTGTTCATGAGCAGGCGGCAAGCCAGGATA
GATTCGGCCATACGTGAGGTAAGACACGGTACATGTGCGTGATCGCCGTG
GAGACTCCACCACTCACATTGGCGATTGATTGCTCCGATTAAGTTGGAGA
CGTTTACAAGTACCCCTCGTTAAAGTGCTGGTTGGAAGCCAGACAGCTAT
ATTTGGAGGTGATTCAGGAGTGTGGACAAAATCAAACATACACGCACGGT
TGCCATCGAAAATATGTGTTTATGTCTTGTAGTGGCCTTGTTGGGCGGTG
CAACTTCACGAAACATGCCGGTTCGCTCTTCTTGACTTGTAAACAAGGTA
TAGCCGGTCGCCCCGGTAGTCCATTAGTCGGCAATCTTCGAAATCTTCTA
GCGGCTAGTCCACGGGTTCGAATCCCGGCGAGTGCAAGCTTTCTCTTACA
ACGTGAGTTTTTTCTCTTGTGCTTGTTTCTGGTGGTGGAAGCGCTACTAG
TTTGTGTGCACTGAGGGAAGCGAGTGCTCAACTCTTCTCGCTTCAAAAAT
CTTCGGCATGCTCCGCAGGAGTCCGCAGGAGGTCGGAGTGGTGGCCTCAG
GGAGAGGAATCTCCTGTGTGACCACGAATCAGAGCTCTGGCGACAACCCC
TACGCGCGAGAGTTTAATGTGACAAAAAACAAACAAAGCAAAGGGGTTTC
TGATAGTTCAAACAACGGTTTGTCTTGTAATGAAAACAGAAGATGCTGTG
CGACAACTTTACTCACAACCTTTGAATGGCGAGCCCTCCAACCTCGGAAG
ACTGTGGCAGAGTGTGTGTGAGTTGATCGTGGAGAAGTACCGTCAGGTAG
GGTGTTAGGAAGCACGATAACCACTGGACTACCAGTCAGCGCTGACTTGT
AGTCCAATGGTTATCGTGCTTCCTAACCAAAAGCTATTGTCCGGGGTTCG
ATTCTCACCCAGTGAGCCTCCTTTTTGAAGCAAAGTTTGCGCCCGTTATA
CAATGTATGGAAAGAAATAGCCTGAGCGAGGTTTCCTCTGCTACGCAAAT
AAACCGATAACCTGCTTGTGGCATGCACGGCGCTGATTACAGGGATTGCA
ACCCTAGGGTGACTTGTACCGGGTTTGTGTCTTTAACATCCAAGACGGAC
ACGGGCAATAGCTTTTGTTAGGAACCGTGATAACCACCGACTCGCTGACT
GATAGTCCAGTGGTTATCGTGCTTCCTAACCAAAAGCTTTTGTCCGAGGT
TCGATTCTCACCCGGTGAGTCTTCTTTTGGAAGCAAAATTTGCGCCCGAT
ATATAGGAAAAAATAGCCTGAGTGAAGTTTCCTCGGCTACGCAAATTAGC
CGATAATCTGCTTGTGGCATGCACGGCGCTGATTACAGGGATTGCAACCG
TGGGGTGCAGGGTTCGTGGCCTGACAGCCAAGACGGACACGGGCATCAGC
TTTGGTTAGGAAGCACGATAACCACTGGACTTCCAGTCAGCGCTGACTGG
TAGTCCAGTGGTTATCGTGCTTCCTAACATAGGTGGCGAACGCATATCCT
CTGGAGAACGCCCGGGGCGCGAAAAAACCCGGGGAAATTGACATCACGAA
GCGGACCCCGGGGGCGCCCTGTTCATGTTTCCAGAAAACACACCGTTTGT
AGCCATCACACAAGCGTTCCATTCTCGAGTCTGCTTGGTACTCCGAATAT
TTTGCAAGGATCGCCCTTCGGATCGGCGCCACGGGGCGGGTAGAAATCTG
GCTCGGGCTTAGCTCTTCGGCCTGGCTTCGTAGCTGATGTTGGAGGCGCG
GGGTCGCTTGCACTTGAATCGTCGCTGTTGGCATGCTTTTGACGTGCTGC
TGCTCTGTATGAATGTCCGAACTGTGTGTGGCGGCGGGCCTCTGTTATGA
ACGCCCCGGGTACGTGGCGAACTTGCCGGGCGAGCTGCGAAATCGCCCCC
GGACGCTATTTCCAGTCGGTTCTGACAACCGCCCCGAGGGGCGTTCGCGC
CGAGCCTTCCGGTACCTGTAAGCGCTGGCTGCTCCCAACCATCAGAGCCA
AAAAGGTAGCAGCGCTGGGTTATTACAAATTGCGTCCAGCCGAAGTCCAT
TCAATTCGTAGGGGAAAATGAATGCTAGGTCATCAGTAGAGTGTGTCGTT
CAATAGTGCATCTATTCGGTGTTAGACTCCGTCAGCAAAGCAATGCCAAG
CAAAACTTCGTCCACACAACCTGTTTGGGCCCACTGACTATTCGCCCCAG
ACGCTGGCTGTTTTGTTGCTGAATCCAAGATAAGACAAAGTAGATACCTC
TCTGCATGAGGAGTCCTTATCTGCTCGTCGATGCCAGTAGAGAGTATGAA
GTCACTGACGTTCACGTGGGGACACCCCGAGCTGCTGCTGGGGCGGAGAA
ACCGAAGTCGGCAACACCAGCAACCTCCGGAATCTGAACCAATTCAATTG
TTTGTAGACGGGGTGATGTGCACCAGTCCGTTAACCTGCTGGTCATCCGC
AGCAGCTTGATATGTATATTTTTGCTAACTTCAGGAGGTTGGGGTCTGTG
GCCGAGAGCACAGCAGTGAAATACGTGCGGTGTCGGTACTGATTGCGTAC
TTTGGAGGAAGCGCTTCGCTTTCTGAAATCTTCAAGCCTCAGCAGCATTT
TCCGAGCATTCCAAAACACACATTGCTGCTGCAAAACGACCTCTACTAAC
ATCGTCTCGTCAGGTCGGGACTCCTCCGAAGCCCCGGCTGATTTCAGCCT
CAGTCGTATTGGCTATTTTGTCTTGATTTTTGCGGTGGAAAACGTTCCTT
GTAATTGAAATGGGCAGACTGGAGCCATAGTCTGCGTGATATCTGTGGAC
ATGCAAGACCACCCACCGTCGTGTGATAACTTGCGATTGTCCTCGCTCGT
CAAAAGCCTTCCCACTGGATTCACACGCCCCATGTGTAATTGCGGGCTCT
CGCCCGATATTTTCTGATTTTCAATCAAATCAATATTGGTTGTATGGGGA
CCATGATGCGATCTAGTCAACAGATTCTACGTTTGCGTGAGTACGCGTCT
CCTTGCGCGTAGTAGACAGGGGCAATATAGTGTACCTCACATTCGCTCTT
ATCGCGATCCTGAAATTCGAGCAGCGATGCTGCAGAATCGTCGAGATCTT
TCGCGCTCCAATGACAATCCTGGTCATTTGTGTGTCGGATGCCTTGAAGA
AGGAAGAATCGCAGTTGCGCGCTCATGTTAAATCGAGGGCTTATGTCTCT
TGCAATTTCCCTAGATGGAGCACAAGATGAAACAAAACACGCCCGATGGA
TCAGACTGCACCCTTGATCTCACGCTTGAAATGAACGCGTTGTCATCATT
ACGCGCATTACCCGGCCCGTCGACTCCTGCAGCAACGAGCGAATAAGAGC
CCCGAGAGTGACCCTCTGCGCGGCGTTCGAGGGGCACAAGCGGGGGAGAA
AAAGCCGCTGGCGACGAGAAGAAAGTGAGGACGCCCGTTTTTGTGGAACG
GTATTGAATTTGGATCCCGGCACGGGCGTCCGAAATGGCGTCCCCGAGCG
TGGTGGTTCTTCGGGTACTCTTTTTCTGTGACGACGGCTTTAGATGTTAA
TATCCTCTGCCTGTCCATCGTGCATTATTCGAGGACTTGTTGAAGAGAGT
CCTCTTTCAATGGTCCAGACGAAGGCATCGATGAGACACAGCTTTCACCG
ACACTGTGTTTGGTAGGCCTGGACTGAAAAGGGAAGGTCTGCAGTTTGTA
GATTTCTTACCGACAGCACGACACGACGTTATCTGCACCAGTATGGAGTT
CTACGGCCGAGGTCGGTCGGGATGCGATGGATTTTTCACCTAGGCATAGT
TTTTCCGGCCCTTGGCCTCCATGGTCTGGCATCGCGTGACCAAAGCCGCG
GAAGCACTTCTTCAATCCGCTGCTGCCCCAGCGAACGTGAATTACTTCAC
AGACGACATTGTTTGTGCCTCCGCGACCATGGTAGCAGTGTATTCGACGT
GTACAGCGTTGACTCGACTTCCATTTGTTTTGCGGTGTGGTATACCGTGA
AAAAACGGTAATTACCACGAAACGGCGGCGGCGATGAGGCTGCGGGGAGG
GCGGGCACGCGACCTTGCGAACATGGTCGCCTTCTTGGGCTGCGCCCGGC
ATCGCGTCTCGTTAATATTTACCCCCGACCTCCTGCGCGTACCAATACTT
ACCGGGATAGCTGGAGATGTTGGCGGTACTGTTGCACCGAAAATTAGCAG
CAACAGCACTACATTACAGCGCAATTACATAAATCTGCGATATGTTCGAT
TTCTGCCAGAAAAAATCCTTCGAAGCCCTAGATTTCTAGAAAATGTTGCG
ACAATCACGAAGAGGGACGTCAACAAGTGCCATGTGATCGCTTCCTACTG
CCTTTTTCGTGTTCCAAAAATTCGACGTAGCGGTCGACGAGGGAAAGGGA
AGGCTGAACCCTTCTCGCGATAAAAATGCAAGCAAGCACCGCAGGAGGAA
GGTGGGGCACAAAAAAAACAAAAGTCCCGGTGTTTCCCCCCTCCTGTGCG
ATCACGGTTGGTTCTAGCTGGACAGAAAAATACACCAAACAAGTGCAGTC
CTCTAAATACGCTGCAAAGTGGAGTGCACGTCTCGCCTTGATCGGAGGGA
CTGTCGCCAATAATAGCGACGAAAATACACACACACACACATGGGCGCCT
TTGCTCCCGCTAGAACATTCCCTCTCGACTTGTGCCTTTCCCCGTGACTG
AACGACCCAAACACGCAGTGACGCCGCAGCCAAAGCAAACCAGCGCAAGT
CCGAAAACAAGCGAATCGCTCATAGCTCGGAACGCTCACTCGAAGACAAG
CCGGCCAACTGGCGAAGGGTCAAGGAGGCCGGCGTCACCTTTTGGATCAA
TGAGATTACGGGGGTGGCCACGGACGAGTGCCCGCACGAGTCGCTGCGGC
CACAAGGGGACCGGAAAAAACGAAGCGGTTTGCTCGAAGATGTCGCTGGG
GACGATCGCGAGACATCCGCTGGCCTCGACTTTGGCTTCGGGCAGGAAGA
GGGCACCGGAGCGCTAGTGTATGACAGGACAGAGTTTGAACAGGCCATGC
GAATATTGGACGGAGGATTGCCTGCTGCACAGCGGGGCTCGTCCTCGTCT
CTGCACCCGTGAGGTGGCTACAACCTTTGATGAGAGGTCACCGTTTTTCT
TGATGGGCGGGCGAGAATCCTCGGAATGTTTTGGAAGGCTTCTCATTGCT
TTCAGCTGGACTGCATAGCTGTTTTCGTAGCAAAGCCGTGGAGCAATGCA
AGTGTCACACGCTTCTGCCTTAACTAGGGATGCTGCCACGATTCCCAACT
TCGGATGACAAGCGCAGACCAGACTGGGTAGTTTTTTGTTGGGGGTGGCA
GATAGCGACCCAGGCGGGGGCTGCATGCCGTAGAAGGCGTATTTTTGTGA
TATGGGTGCGACTTGCGGCAGCGGAAGCGGCAGTTTTTGGATGCGTACTC
ACTTGTGTGTTGTGGATGCGGGACGCTGCGGCGGGGGGACACGTCCGACG
AGGTAGCTCTCCACTAGATGTCGAACCGGATGGGTGCGAGATGGCTTGGA
CCACACGTGTGGTCTGACTTGTCCGCACGCTTGTGTGGTCTGACTAGTCT
GCACGCATGATGCAGAGGAGAGGAAAAAATGGCCGGAGATGCATGTATCT
ACCAGCTATTCTTCGGTCGAAAAATACCTCTACCAGCTATAGTCTACTTT
GGTCGAAATACACCGCAGGTGTTCTCGGCCTAAAATCGTACTCCGTACAT
TTATTTGTACGTTTGAATGTGGATCAGCTATTCATTGCTTGTGGGCAAGA
ATTGGATGCTTTCTCTTCGCATTTTCATGGTGAGTTCTCTACAGACCCAT
TGATCTAAGTGTGTGTTTTCGGCGAC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig18:513181..519356+ >mRNA_P-fluviatile_contig18.3158.1 ID=mRNA_P-fluviatile_contig18.3158.1|Name=mRNA_P-fluviatile_contig18.3158.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1368bp|location=Sequence derived from alignment at P-fluviatile_contig18:513181..519356+ (Porterinema fluviatile SAG_2381) ATGACGGTGGGTCTCGCCGCCTTTTCAGAGGCGGGCGAATCCGCACAGAA ATACGCCGCGAGAATGGTGTACCTGACGGGCGATGACGAGGGATCACTGT TTGGCGGCAGTGCGCCAGAGCCGATGGCAAGGACTTTGAAGCCACCGGTT TTGTTCATGAGCAGGCGGCAAGCCAGGATAGATTCGGCCATACGTGAGAT GACGGTGGGTCTCGCCGCCTTTTCAGAGGCGGGCGAATCCGCACAGAAAT ACGCCGCGAGAATGGTGTACCTGACGGGCGATGACGAGGGATCACTGTTT GGCGGCAGTGCGCCAGAGCCGATGGCAAGGACTTTGAAGCCACCGGTTTT GTTCATGAGCAGGCGGCAAGCCAGGATAGATTCGGCCATACGTGAGCAAC GAGCGAATAAGAGCCCCGAGAGTGACCCTCTGCGCGGCGTTCGAGGGGCA CAAGCGGGGGAGAAAAAGCCGCTGGCGACGAGAAGAAACAACGAGCGAAT AAGAGCCCCGAGAGTGACCCTCTGCGCGGCGTTCGAGGGGCACAAGCGGG GGAGAAAAAGCCGCTGGCGACGAGAAGAAATGACGCCGCAGCCAAAGCAA ACCAGCGCAAGTCCGAAAACAAGCGAATCGCTCATAGCTCGGAACGCTCA CTCGAAGACAAGCCGGCCAACTGGCGAAGGGTCAAGGAGGCCGGCGTCAC CTTTTGGATCAATGAGATTACGGGGGTGGCCACGGACGAGTGCCCGCACG AGTCGCTGCGGCCACAAGGGGACCGGAAAAAACGAAGCGGTTTGCTCGAA GATGTCGCTGGGGACGATCGCGAGACATCCGCTGGCCTCGACTTTGGCTT CGGGCAGGAAGAGGGCACCGGAGCGCTAGTGTATGACAGGACAGAGTTTG AACAGGCCATGCGAATATTGGACGGAGGATTGCCTGCTGCACAGCGGGGC TCGTCCTCGTCTCTGCACCCGTGATGACGCCGCAGCCAAAGCAAACCAGC GCAAGTCCGAAAACAAGCGAATCGCTCATAGCTCGGAACGCTCACTCGAA GACAAGCCGGCCAACTGGCGAAGGGTCAAGGAGGCCGGCGTCACCTTTTG GATCAATGAGATTACGGGGGTGGCCACGGACGAGTGCCCGCACGAGTCGC TGCGGCCACAAGGGGACCGGAAAAAACGAAGCGGTTTGCTCGAAGATGTC GCTGGGGACGATCGCGAGACATCCGCTGGCCTCGACTTTGGCTTCGGGCA GGAAGAGGGCACCGGAGCGCTAGTGTATGACAGGACAGAGTTTGAACAGG CCATGCGAATATTGGACGGAGGATTGCCTGCTGCACAGCGGGGCTCGTCC TCGTCTCTGCACCCGTGA back to top
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