mRNA_P-fluviatile_contig18.3144.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3144.1
Unique NamemRNA_P-fluviatile_contig18.3144.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A6H5KXB9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB9_9PHAE)

HSP 1 Score: 690 bits (1780), Expect = 1.120e-242
Identity = 374/526 (71.10%), Postives = 419/526 (79.66%), Query Frame = 1
Query:  106 LLLLTLERGAAFFSPPFSR-------PAALHASSFASRSRXXXXXXXXXXSIGQLRGG----WNAR-PSFLRGKK--AATDEEG-----RSLSPGFARPIKLQGIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWIDSVEEDRQALFE 1626
            + L+++  G  FFSP   R        A +H     S +           S+  LRGG    W AR  S   G K  AA DEE       SL P F++P       ++ D  A    +         RLATTFFFKDELHL PAEVAALSGLFTLPWVFKPLYGFLSDGLP+FGYRRRSYMVLAGL GASGWFYLAN+AETPF+ATAASIVASLGVA+SDVVADSIVVEKAR SDSQAVAGGLQSLCWGSAAVGGI SAYFSG+LLETMTTREVFSLTTYLPLLITVCA+FIDE+R T ++ SP ++VS+QA+ALWSAIK KSVWLPALFIFLWRATPSS+SA+FFFLT+DIG+GPEFLGRVRLGSSIASL GVWIFQ+FLKE KIS+VLFW  + AVPLGFTQL+LVYH+NR LGIPDELFTFGD+V+L VLGQ+AFMPTLVL+ARLCPPGVEGTLFALLMS FNGGAIVGSELGAYLT+ +G+TE+DFRNLGMLI  CN+SSLLPLPFL+WIDSVE D  +  E
Sbjct:    9 VFLVSIVGGEGFFSPCAGRHVCAGRRSAPIHVHHHPS-TIYRRWDSRTYCSVALLRGGGGRSWKARRQSSSLGLKNAAANDEEAGLGDEASLIP-FSKPTLQNNKVVSEDATAYKPTF-----PRYRRLATTFFFKDELHLAPAEVAALSGLFTLPWVFKPLYGFLSDGLPVFGYRRRSYMVLAGLLGASGWFYLANFAETPFQATAASIVASLGVAVSDVVADSIVVEKARDSDSQAVAGGLQSLCWGSAAVGGITSAYFSGSLLETMTTREVFSLTTYLPLLITVCAMFIDEKRLTENMSSPKQIVSEQASALWSAIKNKSVWLPALFIFLWRATPSSDSAYFFFLTNDIGVGPEFLGRVRLGSSIASLVGVWIFQSFLKETKISKVLFWTAVAAVPLGFTQLLLVYHINRDLGIPDELFTFGDDVVLTVLGQIAFMPTLVLSARLCPPGVEGTLFALLMSIFNGGAIVGSELGAYLTRVMGVTEADFRNLGMLIAICNVSSLLPLPFLKWIDSVEGDENSTDE 527          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A835YKR5_9STRA (BT1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR5_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 1.510e-215
Identity = 320/462 (69.26%), Postives = 379/462 (82.03%), Query Frame = 1
Query:  253 GGWNARPSFLRG----KKAATDEEGRSLS---PGFARPIKLQGIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWIDSVEEDRQA 1617
            G   A+   LRG    +KA  D EG  L+        P  +  IE+T D+ +I+ VYFVQGALGLARLATTFF KDEL L PAE+AAL+G+FTLPWV KPLYGFLSDG+PIFGYRRRSYM+L+GLTGA  W YL+ YA TP EATAA ++A+LGVA+SDVVADS+VVEKAR S SQAV+ GLQSLCWGS+AVGGI+SAYFSGALLE M TR+VF +T  LPLL++  A+ +DE+ +     S  + VS Q  +LW AI QKSVWLPALFIFLW+ATP+S+SAFF+FLT+DI +GPEFLGRVRLGSSIASL GVWIFQT+LKE +IS ++FW ++V+VPLGFTQL+L+YHVNR LGIPDE+FTFGD+VIL VLGQ+AFMPTLVLAARLCPPGVEGTLFALLMS FNGG IVGSELGA LTK++G+TE+DF NLG L+  CNLSSLLPLPFL+WI+  +EDR A
Sbjct:   70 GSGQAKGRRLRGGSTRRKAHEDGEGGWLTRVKQAANGPFAINDIEITPDVFSILVVYFVQGALGLARLATTFFLKDELGLAPAELAALTGIFTLPWVLKPLYGFLSDGVPIFGYRRRSYMLLSGLTGAGAWAYLSLYAHTPAEATAACVLANLGVAVSDVVADSLVVEKARDSQSQAVSSGLQSLCWGSSAVGGIISAYFSGALLERMGTRDVFLITAALPLLVSFAALLVDEKPRPQVEASVQDQVSGQVVSLWRAITQKSVWLPALFIFLWQATPTSDSAFFYFLTNDIKVGPEFLGRVRLGSSIASLLGVWIFQTYLKEVRISTIMFWTSIVSVPLGFTQLLLIYHVNRQLGIPDEVFTFGDDVILTVLGQIAFMPTLVLAARLCPPGVEGTLFALLMSIFNGGGIVGSELGAALTKSIGVTETDFTNLGKLVLLCNLSSLLPLPFLKWIEE-DEDRVA 530          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: W7TPE1_9STRA (Folate biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE1_9STRA)

HSP 1 Score: 524 bits (1350), Expect = 1.210e-177
Identity = 272/427 (63.70%), Postives = 331/427 (77.52%), Query Frame = 1
Query:  358 GIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLA--NYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQA----VAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWI----DSVEED 1608
            G+E + D+ AI+ VYFVQGA+GLARLATTF+ KD+LHL+PA+ AAL G+FT PW+ KPLYGFLSDG P+ GYRRRSY+ ++GL GA  +F LA     ++   AT A    SL VA+SDVVADSIVVEK R ++S A    +AGGLQSLCWGS+AVGGIVSAYFSG LLE + TR VF +T  LPLL+T+ ++ I ERR T           DQ AALWSA+ QKSV+LP  F+ LW+ +PSS+SAFF+FLT ++G+GPEFLGRVRLG+SIASLAGVW++Q +L+E  IS+VL W TL +VPLG TQL+LVYH+N GLGIPDE+FTFGD V+L VLGQ+AFMPTLVLAARLCPPG+EGTLFA LMS FNG   +G+ELGA LT A+G+TE +F NLG+LI  CNLSSLL LPFL  +    D VE D
Sbjct:  103 GVEPSPDVTAILVVYFVQGAIGLARLATTFYLKDDLHLSPAQSAALMGIFTAPWLLKPLYGFLSDGFPLGGYRRRSYLAISGLLGAVSYFVLAFPGLVDSVAAATLACTFGSLSVAVSDVVADSIVVEKIR-TESPAGNLKLAGGLQSLCWGSSAVGGIVSAYFSGFLLEHLGTRAVFGITAILPLLVTLISMGIQERRVTVDYSHSWNRARDQVAALWSAVSQKSVYLPLFFLILWQGSPSSDSAFFYFLTGELGMGPEFLGRVRLGTSIASLAGVWLYQRYLREVPISKVLLWTTLASVPLGLTQLVLVYHINAGLGIPDEVFTFGDSVVLTVLGQIAFMPTLVLAARLCPPGIEGTLFATLMSVFNGAGALGTELGALLTSALGVTERNFENLGLLIIICNLSSLLSLPFLSLLGNEDDKVEVD 528          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A7S4B3G7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B3G7_CHRCT)

HSP 1 Score: 483 bits (1243), Expect = 1.280e-160
Identity = 248/432 (57.41%), Postives = 314/432 (72.69%), Query Frame = 1
Query:  295 AATDEEGRSLSPGFARPIKLQGIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWI 1590
            A  DEE R   P + R   LQG+E + +    M VYFVQG LGLA LA TF+FKD L L PAEVAAL G+  LPWV KP+YGF+SDGLP+FGYRR+SY++LAG  G   W  LA    +  EA   S  ASLGVA+SDVV DSIVVE+AR  D  A +G LQSLCW   A GG+ SAYFSG+LL+ M+ ++VF+LT+  PLL+      + E  +         MVS QA+ LWSA  Q+SVWLPALF+FLW+ATP+S+SA+F+FLT+ +G+  EFLGRVR+G+S+ASLAG+++++ +L++  +  VL W  L + PLG TQL+LVY +NR LGIPD LF FGD +IL VLGQ+AFMP LVLAA +CPPGVEGTLFA LMS FNG  ++G+E GA LT+A+G+TES+F NLG+L+  CNLSSLLPL  L W+
Sbjct:  112 ARHDEENRPGPPRWVRENVLQGVEPSIEAYTAMTVYFVQGGLGLASLARTFYFKDTLGLAPAEVAALQGITALPWVIKPVYGFISDGLPLFGYRRKSYLMLAGAIGFLSWMSLATVVHSVPEAVFFSTTASLGVALSDVVIDSIVVERAR-DDESAGSGALQSLCWSCQATGGLASAYFSGSLLQVMSAQQVFALTSVFPLLVVAMGSRLTEVPRKSKYEDFTTMVSSQASMLWSAASQRSVWLPALFLFLWQATPASDSAYFYFLTNQLGMSAEFLGRVRVGTSLASLAGIYVYRRWLQDVPVKTVLAWAALASAPLGLTQLLLVYGLNRQLGIPDSLFAFGDSLILTVLGQLAFMPLLVLAADICPPGVEGTLFAGLMSVFNGAGVIGNEAGALLTQALGVTESNFENLGLLLIICNLSSLLPLLALGWV 542          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A0G4ETT0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETT0_VITBC)

HSP 1 Score: 477 bits (1227), Expect = 6.400e-159
Identity = 258/477 (54.09%), Postives = 331/477 (69.39%), Query Frame = 1
Query:  253 GGWNARPSFLRGKKAATDEEGRSLSPGFARPIK---LQGIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLAN--YAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDER-----------------------------RQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFL 1581
            GG    P+ L GK AA      S +  F R  K   L G+E + ++ AI+ VYFVQGA GLARLAT+FFFKD+L ++PAEVAAL+GL  LPW  KP+YGFLSD +PI GYRRRSY+ L+G+ GA+ W  LAN     TP  A AA I+ +L VA++DVVADS+VVE+ R    +A AG LQSLCWGS+A+GG+++AY SG+LL ++T+R+VF LT   PLL+ + A  I+E+                             +  G   +  E +++QA  LWSA+K+K + LP LF+FL+RATPSS+SAFFFFLT+DI + PEFLGRVRLG+S  SL GVW++ TFLKE  I ++L   TL ++P+G +QL+L+ HVNR LGIPD    FGD+V   VLGQ+AF+PTLVLAA+LCPPGVEGTLFA LMS FN  A VG+ELGA LT A G+T+SDF NLG L+T CN+SSL PL F+
Sbjct:   15 GGEKKEPASLLGKAAADS----SFTGPFVRWFKRRALLGVEPSPELAAILIVYFVQGASGLARLATSFFFKDDLQVSPAEVAALTGLIYLPWFIKPVYGFLSDAVPIAGYRRRSYLALSGVLGAAAWLALANPDLVNTPATALAACILTNLSVAVADVVADSLVVERTRDGPPEATAGSLQSLCWGSSAIGGLLTAYSSGSLLSSLTSRQVFGLTAVFPLLVLLMAFLINEKPVHFVTNNGDSSKGGASPQVRNVAVYEQGKGQGRELTVTEELAEQAKRLWSAVKRKEILLPTLFLFLFRATPSSDSAFFFFLTNDIKLSPEFLGRVRLGTSAGSLVGVWLYNTFLKEVPIKKLLVGTTLASLPIGLSQLLLITHVNRDLGIPDTWLCFGDDVAATVLGQLAFLPTLVLAAQLCPPGVEGTLFATLMSIFNAAAGVGTELGAVLTSAFGVTDSDFTNLGALVTLCNVSSLFPLLFI 487          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A1Z5K1Y4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1Y4_FISSO)

HSP 1 Score: 473 bits (1218), Expect = 6.120e-158
Identity = 238/424 (56.13%), Postives = 313/424 (73.82%), Query Frame = 1
Query:  358 GIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGW-------FYLANYAETPFEAT-AASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEM--VSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWIDSV 1599
            G+ +T +I+AI  +YFV+GALGLARLA ++  KDELHL PAE++ALSGLF LPW  KP+YGFLSDG P+ G+RR+SY++LAGL G S +       F+    + T    T  A +VAS  +A++DVVAD IVV K R S+  A+AGGLQSLCWGSAA GG++SAYFSG+LLE MT R+VF+LT  LP L+ + A  ++++R   S+   N +  V  Q  ALW A+ QK++W PALF+FLW+ATP+++ AFFFFL++D+G+GPEFLGRVRL ++ ASL GVW++  +LK  KI  +LFW+++ + PLG   ++LV HVNR LGIPD    +GD+VILA LG++AF+PTLVLAARLCPPGVE  LFA LMS FNG    G+E+GA LTK  G+TE+DF NL  LI  C+LSS+ PLPF+  +D V
Sbjct:   82 GMTITPEIVAIATIYFVEGALGLARLAQSYLLKDELHLGPAELSALSGLFVLPWTIKPIYGFLSDGFPLLGFRRKSYLILAGLLGGSAYTILGFSGFWEGLPSSTSITGTLVALLVASGCIAMADVVADGIVVAKTRESNDPAIAGGLQSLCWGSAATGGLISAYFSGSLLEVMTVRQVFALTAVLPFLVALIAFGVEDKRVEPSVQKDNFIRGVKVQVDALWGALSQKAIWRPALFLFLWQATPTADGAFFFFLSNDLGLGPEFLGRVRLVTAAASLVGVWLYNQYLKTVKIKDILFWSSVASFPLGLIPILLVTHVNRELGIPDTALIYGDDVILAALGEMAFLPTLVLAARLCPPGVEAVLFATLMSIFNGAGTAGTEIGALLTKVFGVTENDFTNLAPLIFLCSLSSIFPLPFIGLLDEV 505          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: B8BRN5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN5_THAPS)

HSP 1 Score: 462 bits (1188), Expect = 1.310e-154
Identity = 237/431 (54.99%), Postives = 311/431 (72.16%), Query Frame = 1
Query:  358 GIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLA---------NYAETPFEATAAS-IVASLGVAISDVVADSIVVEKARGS----DSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEM------VSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWI 1590
            GIE T DILAI A+YFV+GALGLARLA TF  KDELHL PAE++A  G+ TLPW  KPLYGFLSDG PIFGYRRRSY+VLAG  G   + +LA             +   AT AS +++S  +A SDVVAD IVV+K R +    D  A+AGGLQSLCWGSAA+G ++SAYFSG+LLE+M+  +VF + + LPLL+   ++ I+E     +  +  E       +  Q ++LWSA+ Q +++ P LF+FLW+ATP+S+ A  +FLTDDIG GPEFLGRVRL ++ +SL GVW++Q +L+   I  VL W ++++VPLG TQL+L+ H NR LGIPD  F FGD+V+L++LG++AF+PTLVLAARLCPPGVE  LFA LMS +NG   VG+E+GA LTK +G+TE+DF NL +L   CN+SSL+PL F+ W+
Sbjct:    6 GIEPTPDILAITAIYFVEGALGLARLAQTFLLKDELHLGPAELSATLGILTLPWTIKPLYGFLSDGFPIFGYRRRSYLVLAGGVGFLSYAFLAWGTSLIPEGASQNSILTATIASFLLSSASIAFSDVVADGIVVQKTREAATRGDDPAIAGGLQSLCWGSAAIGALISAYFSGSLLESMSPSDVFGIASILPLLVGAMSLLIEEEPVNDAATANGETTNTISPIKQQISSLWSALSQPTIYKPILFLFLWKATPTSDGAMLYFLTDDIGFGPEFLGRVRLITAASSLLGVWLYQQYLRRVPIKDVLLWTSVISVPLGLTQLLLISHYNRVLGIPDGAFVFGDDVVLSILGEMAFLPTLVLAARLCPPGVEAVLFATLMSIYNGAGTVGTEVGAGLTKLLGVTETDFSNLALLTVICNVSSLIPLVFIGWL 436          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A1E7F211_9STRA (BT1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F211_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 6.190e-153
Identity = 241/442 (54.52%), Postives = 314/442 (71.04%), Query Frame = 1
Query:  358 GIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASG--------WFYLANY------AETPFEATAASIVASLG-VAISDVVADSIVVEKARGS--DSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAV-FIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWIDSVEEDRQALFEE 1629
            GI+ T D++AI  +YFV+GALG+ARLA TF  KDELHL PAE++ALSG+FTLPW  KP+YGFLSDG P+FGYRRRSY++LAG+TG           W  L N       + T    T A++V S   +A+SDVVAD IVV+K R S     ++AGGLQSLCWGSAAVGG++SAYFSG+LLE M  ++VFSLT  LPLL+ + A  FID              +  Q  +LW+AIKQ +++ PALFIFLW++TP+S+ A  FF T+++G GPEFLGRVRL  + +SL G+W++ T+LK K I  +LFW T+++ PLG   L+L+ H NR +GIPD  F FGD+V+L+VLG++AF+PTLVLAAR+CP GVE  LFA LMS  NG  +VG+E+GA LTKA+G+TES+F NL +L   CNL+SL PL F+ W+D V  D +   EE
Sbjct:   41 GIDPTPDVIAIATIYFVEGALGIARLAQTFLLKDELHLGPAELSALSGIFTLPWTVKPIYGFLSDGFPLFGYRRRSYLILAGVTGCFSYSAVGHNFWGLLDNVNNVGDGSSTMVSYTIAALVLSSACIAVSDVVADGIVVQKTRESAKTDPSLAGGLQSLCWGSAAVGGLLSAYFSGSLLEVMKPQDVFSLTAILPLLVALIANDFID--------------IQSQIESLWNAIKQPAIYKPALFIFLWQSTPTSDGAMLFFQTENLGFGPEFLGRVRLLGAFSSLFGIWLYNTYLKNKSIKDILFWATIISFPLGLLDLVLITHANRLIGIPDNWFIFGDDVVLSVLGEIAFLPTLVLAARICPIGVEAVLFATLMSINNGAGVVGTEIGALLTKALGVTESNFDNLWLLSLICNLTSLYPLLFIGWLDEVGTDSEQEIEE 468          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: A0A0M0J841_9EUKA (Folate biopterin transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J841_9EUKA)

HSP 1 Score: 461 bits (1186), Expect = 1.120e-152
Identity = 245/456 (53.73%), Postives = 308/456 (67.54%), Query Frame = 1
Query:  352 LQGIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGS----------------------------------LGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITES------DFRNLGMLITFCNLSSLLPLPFLRWIDSV 1599
            +QG+        +M VYFVQG LGLA LA T+F K+ LHL PAE +AL G+ +LPWV KP+YGFL+D LPI GYRR+ Y+++AGL GA+GW  LA +  TP +A  AS VASLGVA+SDVV DS+VVE+AR  D+ A +G LQSLCW  ++ GG+ SAY SG+LLETMT ++VF +T   PLL++  ++ + E +   S                                  LGS    V DQAA LW A+ Q+ VWLPALF+ LW+ TPSS  AFF+FLTD++G GPEFLGRV +G+SIASL G+W+++T+L+E  I  +     L    LG +QL+LV H NR LGIPD LFTFGD+V+L VLGQ+AFMP LVLAA LCPPGVEGTLFALLMS FN   I+G+ELGA LT  +G++ S      DF NLG+LIT CNLSSLLPL  L W+D  
Sbjct:   69 MQGVAGGPATYTVMTVYFVQGILGLASLARTYFLKENLHLGPAESSALLGIASLPWVIKPVYGFLTDALPILGYRRKPYLIMAGLLGAAGWASLATWVHTPAQAILASTVASLGVAMSDVVVDSLVVERAR-DDASASSGALQSLCWSCSSFGGLASAYLSGSLLETMTPQQVFGITAVFPLLVSAISLNLAEEKVVSSQTRGEDSADAMAGGATTTGDGATAXXXXXXXXXXLGSFGAQVGDQAALLWGAVSQRRVWLPALFMLLWQGTPSSGGAFFYFLTDELGFGPEFLGRVSVGTSIASLLGIWLYRTYLQEVPIKALFRGLALTGTALGLSQLLLVTHYNRVLGIPDALFTFGDDVVLTVLGQLAFMPLLVLAASLCPPGVEGTLFALLMSGFNAAGILGTELGAMLTAWLGVSASEEGGGIDFTNLGLLITICNLSSLLPLLALDWLDEA 523          
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Match: UPI0003051470 (folate/biopterin family MFS transporter n=1 Tax=Spirulina subsalsa TaxID=54311 RepID=UPI0003051470)

HSP 1 Score: 454 bits (1169), Expect = 2.940e-151
Identity = 228/417 (54.68%), Postives = 304/417 (72.90%), Query Frame = 1
Query:  358 GIELTWDILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVFKPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAASIVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSAYFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVSDQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFLGRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVYHVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFALLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLPFLRWIDSVEED 1608
            G E T ++LAI+ VYFVQG LGL+RLA +FF KDELHL+PA+V AL G+  LPWV KPL+GFLSDGLP+FGYRRRSY+VL+G+ G   W  LA   +  + AT A +++S+ +AISDV+ADSIVVE+ RG +S A +G LQSL W  +A+GG+++AY SG LL+   T+ VF +T   PL++   A +I E     SL +   ++  Q   +W A+KQK++WLP LF+FLW+ATPSSESAFFFF+T+D+G  PEFLGRVRL +S+A+L G+W++Q F K      +L W T++A  LG T L+LV H NR LGI D  F+ GD +IL V+GQ+AFMP LVL+ARLCPPG+E TLFALLMS +N   ++  ELGA LT+ +G+TE++F  L +L+   NLS+LLPLPFL W+   +ED
Sbjct:   22 GNEPTPELLAILTVYFVQGILGLSRLAVSFFLKDELHLSPAQVGALLGVAALPWVVKPLFGFLSDGLPLFGYRRRSYLVLSGILGTLAWVALATLVQDAWTATLAILLSSISIAISDVIADSIVVERVRG-ESMAQSGSLQSLTWAVSALGGLITAYLSGWLLQQFNTQTVFWITAAFPLIVCGVAGWIVETPLLPSLDAKRPVIGTQIKQVWQAMKQKAIWLPTLFVFLWQATPSSESAFFFFVTNDLGFQPEFLGRVRLVTSLAALLGIWLYQRFFKAVPFRVILGWTTVLASALGMTTLLLVTHTNRALGIDDHWFSLGDSLILTVMGQIAFMPVLVLSARLCPPGIEATLFALLMSIWNLAGLLSHELGALLTQWLGVTETNFEQLWLLVVLTNLSTLLPLPFLGWLPGEDED 437          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXB9_9PHAE1.120e-24271.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKR5_9STRA1.510e-21569.26BT1 family-domain-containing protein n=1 Tax=Tribo... [more]
W7TPE1_9STRA1.210e-17763.70Folate biopterin transporter n=2 Tax=Monodopsidace... [more]
A0A7S4B3G7_CHRCT1.280e-16057.41Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0G4ETT0_VITBC6.400e-15954.09Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A1Z5K1Y4_FISSO6.120e-15856.13Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8BRN5_THAPS1.310e-15454.99Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A1E7F211_9STRA6.190e-15354.52BT1-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A0M0J841_9EUKA1.120e-15253.73Folate biopterin transporter n=1 Tax=Chrysochromul... [more]
UPI00030514702.940e-15154.68folate/biopterin family MFS transporter n=1 Tax=Sp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:396062..400875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score735.7
Seed ortholog evalue1.5e-209
Seed eggNOG ortholog2880.D8LTJ0
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0008517,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0015075,GO:0015231,GO:0015238,GO:0015318,GO:0015350,GO:0015711,GO:0015849,GO:0015884,GO:0015885,GO:0015893,GO:0022857,GO:0031967,GO:0031975,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0051958,GO:0055085,GO:0071702,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.BT1 family
EggNOG OGs2CMCD@1,2QPYM@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionFolate-biopterin transporter
Ec32 orthologEc-02_005800.1
Exons7
Model size1958
Cds size1617
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.5036347-UTR-P-fluviatile_contig18:396061..3961361622815753.5036347-UTR-P-fluviatile_contig18:396061..396136Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 396062..396136 +
1693563189.7542794-UTR-P-fluviatile_contig18:396061..3961361693563189.7542794-UTR-P-fluviatile_contig18:396061..396136Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 396062..396136 +
1622815753.6119459-UTR-P-fluviatile_contig18:400609..4008751622815753.6119459-UTR-P-fluviatile_contig18:400609..400875Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 400610..400875 +
1693563189.8452914-UTR-P-fluviatile_contig18:400609..4008751693563189.8452914-UTR-P-fluviatile_contig18:400609..400875Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 400610..400875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.519052-CDS-P-fluviatile_contig18:396136..3964181622815753.519052-CDS-P-fluviatile_contig18:396136..396418Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 396137..396418 +
1693563189.766531-CDS-P-fluviatile_contig18:396136..3964181693563189.766531-CDS-P-fluviatile_contig18:396136..396418Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 396137..396418 +
1622815753.533713-CDS-P-fluviatile_contig18:397591..3978121622815753.533713-CDS-P-fluviatile_contig18:397591..397812Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 397592..397812 +
1693563189.7764027-CDS-P-fluviatile_contig18:397591..3978121693563189.7764027-CDS-P-fluviatile_contig18:397591..397812Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 397592..397812 +
1622815753.5466034-CDS-P-fluviatile_contig18:398123..3982831622815753.5466034-CDS-P-fluviatile_contig18:398123..398283Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 398124..398283 +
1693563189.7860253-CDS-P-fluviatile_contig18:398123..3982831693563189.7860253-CDS-P-fluviatile_contig18:398123..398283Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 398124..398283 +
1622815753.5609064-CDS-P-fluviatile_contig18:398491..3987091622815753.5609064-CDS-P-fluviatile_contig18:398491..398709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 398492..398709 +
1693563189.7977674-CDS-P-fluviatile_contig18:398491..3987091693563189.7977674-CDS-P-fluviatile_contig18:398491..398709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 398492..398709 +
1622815753.5741534-CDS-P-fluviatile_contig18:399099..3992481622815753.5741534-CDS-P-fluviatile_contig18:399099..399248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 399100..399248 +
1693563189.805775-CDS-P-fluviatile_contig18:399099..3992481693563189.805775-CDS-P-fluviatile_contig18:399099..399248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 399100..399248 +
1622815753.5863576-CDS-P-fluviatile_contig18:399786..3999411622815753.5863576-CDS-P-fluviatile_contig18:399786..399941Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 399787..399941 +
1693563189.81625-CDS-P-fluviatile_contig18:399786..3999411693563189.81625-CDS-P-fluviatile_contig18:399786..399941Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 399787..399941 +
1622815753.598127-CDS-P-fluviatile_contig18:400177..4006091622815753.598127-CDS-P-fluviatile_contig18:400177..400609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 400178..400609 +
1693563189.8331127-CDS-P-fluviatile_contig18:400177..4006091693563189.8331127-CDS-P-fluviatile_contig18:400177..400609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 400178..400609 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3144.1prot_P-fluviatile_contig18.3144.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 396137..400609 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3144.1

>prot_P-fluviatile_contig18.3144.1 ID=prot_P-fluviatile_contig18.3144.1|Name=mRNA_P-fluviatile_contig18.3144.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=539bp
MKPSRCWSLLLLLLTLERGAAFFSPPFSRPAALHASSFASRSRPVSRPSS
LYTSIGQLRGGWNARPSFLRGKKAATDEEGRSLSPGFARPIKLQGIELTW
DILAIMAVYFVQGALGLARLATTFFFKDELHLNPAEVAALSGLFTLPWVF
KPLYGFLSDGLPIFGYRRRSYMVLAGLTGASGWFYLANYAETPFEATAAS
IVASLGVAISDVVADSIVVEKARGSDSQAVAGGLQSLCWGSAAVGGIVSA
YFSGALLETMTTREVFSLTTYLPLLITVCAVFIDERRQTGSLGSPNEMVS
DQAAALWSAIKQKSVWLPALFIFLWRATPSSESAFFFFLTDDIGIGPEFL
GRVRLGSSIASLAGVWIFQTFLKEKKISQVLFWNTLVAVPLGFTQLILVY
HVNRGLGIPDELFTFGDEVILAVLGQVAFMPTLVLAARLCPPGVEGTLFA
LLMSTFNGGAIVGSELGAYLTKAVGITESDFRNLGMLITFCNLSSLLPLP
FLRWIDSVEEDRQALFEESASREGNNRDKELLNKSNKK*
back to top

mRNA from alignment at P-fluviatile_contig18:396062..400875+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3144.1 ID=mRNA_P-fluviatile_contig18.3144.1|Name=mRNA_P-fluviatile_contig18.3144.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4814bp|location=Sequence derived from alignment at P-fluviatile_contig18:396062..400875+ (Porterinema fluviatile SAG_2381)
CACAGAGCTTTGCTTACGCAGAGGACAGGTGCAGGTGCCTTCTGCTTTCC GACATTCCCCGCGGCCTCTTGAGGGATGAAACCATCCCGGTGCTGGTCGT TGCTCCTCCTCCTCCTGACTTTGGAAAGAGGGGCGGCTTTCTTTAGCCCG CCGTTCTCTAGACCTGCGGCCCTCCACGCCAGCTCGTTTGCCTCCAGATC AAGGCCGGTTTCGAGGCCATCTTCCCTGTATACAAGCATTGGGCAGCTTC GCGGTGGATGGAATGCGAGGCCATCGTTTCTCAGGGGGAAGAAAGCAGCA ACAGATGAGGAGGGCAGATCTTTGTCGCCCGGATTCGCTCGGCCGATCAA GCTACAGGTGTGTCTACACACAACACAGTCTCGCGTCACGCCGTCATGCT GTGTGTGTAGTGGGACAGCAGGCTGAGCACACCAACCTTGCATAATCGGT TATTGATGAGAAGACAGTACAGTCCCGCGTCACAGCGTCATGCTTTGTGT AATGGGACAGTAGACTGAGCACAACAACCTTGCATAATCGGTTGTCGATA GGAAGGCAAGGTCAATGCCGCTTGTGGGTAAGAAAACTCGAATCGTGAGC CGTAGCCGCGGTAGAAAACATGTAGGGACCAGCACGTGGCAGCCTCGGCG ATGAGACCAAATGCAGCAGTACAGCAGTCGGCAAGTGTCGACTTTTCCCA CGATGAAAATCAGCCCAATGCCGAAACAGGATATCAGTACGGCGTTGTTT TTCCGAAGATGACAAATTATCTGCGGACTTGCGGCTGCTGTCATCGGGCC GTTTGAGTAGGCAATACCGGAAGAACTGCAGTGGTCACCACCCGACCTCG GTTTATTGGCAAAAATGATTTCACCCAATCCTACACGAAAATTTGGCTCA AATGCTCCAGAAAAGTAAAGAATACCTCAGCATACGGAGCGGGCGCTTAA TCTGATCGTTGAGATATCAATTTACAAATTTACGCACATTTGCTGTTGCA CTGCTATCCCGAGAAACATGCCAGACTGGCATTCTCCGTGTCTTGGTAGC CCAAGTACAGGCAAAGGATGCAAAGGGCGCTTGTCGCGGCCAGGCGGGTG TGAGCCTTCGCGACCCAGCTTGCGATTCAAATATAGAGCGTTCATTGCCG TGCCTCGAAGTCTTTCCCGTTGTGCAACGTGGAGGGTTGTCAACTTCAGT CGAAGCAGGGGCAAAAACACAGCGGAGATATTCCATACACTCAAGTAGCG AGATTGAACGAACAAAATGGTTTGTGTGGGGCTCTCGTGTGCGTCTATGA AGTGCTGGTGGAAATTAATGGAAGATTTCAGAAGGCGTGGCGTTTTGCCT CAGCAGGAGCGCGGATGAGGGGGAATGACTCAGGACTGGGGAGATAAAAG CCATGGTTCTGCCAGGAAAGGCCGGAACTTGTGCCAACCACTCCTACGAT TGACCTGGTTAATCGAAACGGCACTGTCGTCGCCAAAAAAAGCACGAGTT CCCTCCTCCGTGGTTCCTCACGTCGGCCAGGGAATCGAGTTGACCTGGGA CATTCTCGCGATAATGGCGGTTTACTTCGTGCAAGGCGCGTTGGGTCTCG CGCGGCTGGCGACGACGTTTTTCTTCAAGGACGAGTTGCACCTGAACCCC GCAGAAGTGGCGGCGCTCTCGGGCCTCTTCACGCTCCCTTGGGTGTTCAA ACCGCTGTACGGCTTCTTGAGCGATGGGCTGCCCATCTTTGGGTACCGAC GGTATGCTGCATTGGCCACCTGAGCTTCTCGCTTGTGTTATGTGCACTTC TCTACTGTTTCGCATGTTTTCCCCCAATTTGGGCGTGGACTTTACGCGTG ATTCGTGCGTTCTCGCCTGATTCGTTTGAGCTCCTCGCCTGTTGAGTGAG CTCCTCGCCTGTCTCGTGCGCGCAAGCACCTCTCTCTTTCCAAGGTTTGT ACGTCCAACACCTCGAAAAAGAGGCTATTTGGGGAAGCGAGGCGTTCCTG CTGCTGTCAAACCACGTACGGACTCCTTGCTGTGCCTTATTTCTCTGTTC GCCACGATACAGGAGGTCTTACATGGTTCTCGCGGGCTTGACCGGAGCGT CAGGGTGGTTTTATCTGGCCAATTACGCCGAGACCCCGTTCGAAGCCACG GCTGCAAGTATCGTAGCCTCCCTGGGCGTGGCGATAAGCGATGTCGTCGC TGACTCCATCGTTGTCGAAAAGGTGGGGCCGAAAACCACGGGATCACACA GAGTTTGGTTAGATTGATGTGGGTTTCTTCTCTGGTGCTGATTCCAACCA CGTGCGCGTGGCGGTATCGTTATTTCTTTGCGTGCGTTCGCGCGTACATT TCTCCTTGCAAATGCGTTCCGCCATGCCCGTGCCCTTGGCAATGCTGAGT TCAATCTGCGCGACCTCCGTTGTCCTACAGGCCCGGGGCTCGGATTCTCA AGCTGTTGCGGGCGGGCTCCAATCCCTGTGCTGGGGCAGCGCGGCCGTCG GAGGGATCGTGTCCGCGTATTTTTCTGGCGCCCTGCTGGAAACGATGACG ACGAGAGAGGTGTTCTCGCTGACGACGTACTTGCCGCTGTTGATCACAGT GTGCGCCGTCTTCATCGACGAAAGAAGGCAGACCGGTTCGCTGGGCAGGT GAGCCGCATGCCACGGAGAGACCCAGCTTGTGGGCGCAGCGTTCCACGGA GTGCTCCACCTGGTAGGTGCAGCTCTTGTACGGAGGGCACATCAAGTGAG TAGTGCTCAGAACGCAAACGCAAACTGATGCGCCGTTTGGAAGCGTATGA AAAGGCGTCGACCTGCCTCGGCCGGCTTCAGCGGGAAGTGTCGAAAGAAA TTCTAGTGATCTTCTTGATTTTGTGTTCCGAGAGTCCGTAGTTGATTCCT GCTCAGCCTGGAAAGTAATGCTCCCTTATCTGAGCGTTACTGCGGTGTTC CCTACTCCTACCCCTGCTTGATTTGCGTGCTGATTCACACACACATGCAC ACACGCGACTCTCCCACGATCCTGCCGCGCTCGAAAAGTCCGAACGAGAT GGTGTCGGACCAAGCTGCCGCCCTCTGGTCCGCCATCAAGCAGAAATCTG TTTGGCTACCTGCGCTCTTCATCTTCCTGTGGCGAGCGACGCCGTCGAGC GAATCGGCGTTCTTCTTTTTCCTCACCGACGACATCGGTGAGTGAGGGAG GTTTTCCTCACCAATGGGTGTGTGAGGCAAACCACGCCACGCCAGCAAGC AAGCCAGCTGGCACATTTTGTACGGACGGCAATGCCCGTGCTGCCGTCGG GTGGTGAGAGAGGGAGAAAATGCCAGCAAGCAAACTTTCTGGAACGTTTC TTCGGGCGGTGATGCTCGCTCTGCCGTCGGCATTTTTGTTTGTCACCCGC TTGGTTGGGAGTTCAACCGGGTGGTTGGCACCGTTTGTGACACACGATGC GGCTTACGTACGCAAAAAGTCCAAATGTCAAACGAAACACGTGCGCCTTG TGCAATTTTCTAATTCCGGAGAAAACGGTTTGTCCGGAAATATTATGACG AGAGTGACTACAAAAAACACACCCGCTTCCGATACCCACATTGACGTACA CCCGTGTTCTCTTCTCTTCGGGCCCCAAAATGGTACTGCATGCGTGTGCT TTCTTTCTGGCGCGTGCGGTACGCTTGTGGACTTGCGATCGACACCCCGT CCCCTTGATCGAGACGTCGCCGCAGGTATCGGGCCAGAGTTTCTGGGCCG GGTCCGGCTAGGATCGTCGATCGCCAGCCTGGCCGGAGTCTGGATATTCC AAACATTTCTCAAGGAGAAGAAAATCAGCCAAGTGCTCTTTTGGAATACT CTGGTGGCCGTGCCTCTGGGTTTCACGCAGGTGAGCGTCGAATGTTGACG CAAGACCCCTCCTGCCTTCCCTTTCCCCACGCGTCCTCTCATTGCCACGT TCGATTATACTAAGCTGTTGTGGGTGATCTGCTGCCGTGCCGCCTTTGCT AGCGCTGTGCTCGTTGCGCTTGAATCCGCTCCTTGTCGGTTATCCGCGTA TTCCTGTCACACGTCGATATGCCCGTCCCGCCTTCGCACCCCGCTTCCTC GCTCGATCAACTGCAGCTGATTCTGGTATACCACGTGAACCGAGGTCTGG GCATCCCAGACGAGCTCTTCACGTTTGGGGATGAGGTCATTCTGGCGGTG CTCGGGCAGGTCGCCTTTATGCCAACCCTTGTGCTCGCAGCAAGGTTGTG TCCTCCCGGGGTAGAAGGGACGTTGTTCGCGTTGCTCATGTCTACCTTTA ACGGCGGGGCCATCGTTGGCAGCGAGCTAGGGGCGTACCTCACGAAAGCA GTGGGAATCACGGAGTCTGACTTTCGTAATCTCGGGATGCTGATCACTTT CTGTAATTTAAGTAGCTTGCTGCCGCTGCCGTTCTTGAGGTGGATCGATT CCGTAGAAGAGGACAGGCAGGCTCTTTTCGAAGAATCCGCCTCGCGAGAA GGCAACAATAGGGATAAGGAGCTCTTGAACAAGTCAAACAAGAAGTAGAG ATAAAACCTAGCGCTAGATTTAGTATGCCGATGGGCATACGGGTCGAAAT CAATGTACTACGTTGCGAGAGAGACGCAGCGTAGCGTATCTTCAGCAGAT GTCGGTGCTGGGTTGACACCAGGGTACATTGTTGGGTATATTTACTGAGC GGGACTTTGCATTAGCGATGTTGTTGTTGCCGTTGTTGTTGTTATTCGCA TAAGAAACCGTGCTGGTCGCTCTATCCAGTACCTCCTTCTGTGCCACTAA CTCCATACTTCTCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig18:396062..400875+

>mRNA_P-fluviatile_contig18.3144.1 ID=mRNA_P-fluviatile_contig18.3144.1|Name=mRNA_P-fluviatile_contig18.3144.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3234bp|location=Sequence derived from alignment at P-fluviatile_contig18:396062..400875+ (Porterinema fluviatile SAG_2381)
ATGAAACCATCCCGGTGCTGGTCGTTGCTCCTCCTCCTCCTGACTTTGGA
AAGAGGGGCGGCTTTCTTTAGCCCGCCGTTCTCTAGACCTGCGGCCCTCC
ACGCCAGCTCGTTTGCCTCCAGATCAAGGCCGGTTTCGAGGCCATCTTCC
CTGTATACAAGCATTGGGCAGCTTCGCGGTGGATGGAATGCGAGGCCATC
GTTTCTCAGGGGGAAGAAAGCAGCAACAGATGAGGAGGGCAGATCTTTGT
CGCCCGGATTCGCTCGGCCGATCAAGCTACAGATGAAACCATCCCGGTGC
TGGTCGTTGCTCCTCCTCCTCCTGACTTTGGAAAGAGGGGCGGCTTTCTT
TAGCCCGCCGTTCTCTAGACCTGCGGCCCTCCACGCCAGCTCGTTTGCCT
CCAGATCAAGGCCGGTTTCGAGGCCATCTTCCCTGTATACAAGCATTGGG
CAGCTTCGCGGTGGATGGAATGCGAGGCCATCGTTTCTCAGGGGGAAGAA
AGCAGCAACAGATGAGGAGGGCAGATCTTTGTCGCCCGGATTCGCTCGGC
CGATCAAGCTACAGGGAATCGAGTTGACCTGGGACATTCTCGCGATAATG
GCGGTTTACTTCGTGCAAGGCGCGTTGGGTCTCGCGCGGCTGGCGACGAC
GTTTTTCTTCAAGGACGAGTTGCACCTGAACCCCGCAGAAGTGGCGGCGC
TCTCGGGCCTCTTCACGCTCCCTTGGGTGTTCAAACCGCTGTACGGCTTC
TTGAGCGATGGGCTGCCCATCTTTGGGTACCGACGGGAATCGAGTTGACC
TGGGACATTCTCGCGATAATGGCGGTTTACTTCGTGCAAGGCGCGTTGGG
TCTCGCGCGGCTGGCGACGACGTTTTTCTTCAAGGACGAGTTGCACCTGA
ACCCCGCAGAAGTGGCGGCGCTCTCGGGCCTCTTCACGCTCCCTTGGGTG
TTCAAACCGCTGTACGGCTTCTTGAGCGATGGGCTGCCCATCTTTGGGTA
CCGACGGAGGTCTTACATGGTTCTCGCGGGCTTGACCGGAGCGTCAGGGT
GGTTTTATCTGGCCAATTACGCCGAGACCCCGTTCGAAGCCACGGCTGCA
AGTATCGTAGCCTCCCTGGGCGTGGCGATAAGCGATGTCGTCGCTGACTC
CATCGTTGTCGAAAAGGAGGTCTTACATGGTTCTCGCGGGCTTGACCGGA
GCGTCAGGGTGGTTTTATCTGGCCAATTACGCCGAGACCCCGTTCGAAGC
CACGGCTGCAAGTATCGTAGCCTCCCTGGGCGTGGCGATAAGCGATGTCG
TCGCTGACTCCATCGTTGTCGAAAAGGCCCGGGGCTCGGATTCTCAAGCT
GTTGCGGGCGGGCTCCAATCCCTGTGCTGGGGCAGCGCGGCCGTCGGAGG
GATCGTGTCCGCGTATTTTTCTGGCGCCCTGCTGGAAACGATGACGACGA
GAGAGGTGTTCTCGCTGACGACGTACTTGCCGCTGTTGATCACAGTGTGC
GCCGTCTTCATCGACGAAAGAAGGCAGACCGGTTCGCTGGGCAGGCCCGG
GGCTCGGATTCTCAAGCTGTTGCGGGCGGGCTCCAATCCCTGTGCTGGGG
CAGCGCGGCCGTCGGAGGGATCGTGTCCGCGTATTTTTCTGGCGCCCTGC
TGGAAACGATGACGACGAGAGAGGTGTTCTCGCTGACGACGTACTTGCCG
CTGTTGATCACAGTGTGCGCCGTCTTCATCGACGAAAGAAGGCAGACCGG
TTCGCTGGGCAGTCCGAACGAGATGGTGTCGGACCAAGCTGCCGCCCTCT
GGTCCGCCATCAAGCAGAAATCTGTTTGGCTACCTGCGCTCTTCATCTTC
CTGTGGCGAGCGACGCCGTCGAGCGAATCGGCGTTCTTCTTTTTCCTCAC
CGACGACATCGTCCGAACGAGATGGTGTCGGACCAAGCTGCCGCCCTCTG
GTCCGCCATCAAGCAGAAATCTGTTTGGCTACCTGCGCTCTTCATCTTCC
TGTGGCGAGCGACGCCGTCGAGCGAATCGGCGTTCTTCTTTTTCCTCACC
GACGACATCGGTATCGGGCCAGAGTTTCTGGGCCGGGTCCGGCTAGGATC
GTCGATCGCCAGCCTGGCCGGAGTCTGGATATTCCAAACATTTCTCAAGG
AGAAGAAAATCAGCCAAGTGCTCTTTTGGAATACTCTGGTGGCCGTGCCT
CTGGGTTTCACGCAGGTATCGGGCCAGAGTTTCTGGGCCGGGTCCGGCTA
GGATCGTCGATCGCCAGCCTGGCCGGAGTCTGGATATTCCAAACATTTCT
CAAGGAGAAGAAAATCAGCCAAGTGCTCTTTTGGAATACTCTGGTGGCCG
TGCCTCTGGGTTTCACGCAGCTGATTCTGGTATACCACGTGAACCGAGGT
CTGGGCATCCCAGACGAGCTCTTCACGTTTGGGGATGAGGTCATTCTGGC
GGTGCTCGGGCAGGTCGCCTTTATGCCAACCCTTGTGCTCGCAGCAAGGT
TGTGTCCTCCCGGGGTAGAAGGGACGTTGTTCGCGTTGCTCATGTCTACC
TTTAACGGCGGGGCCATCGTTGGCAGCGAGCTAGGGGCGTACCTCACGAA
AGCAGTGGGAATCACGGAGTCTGACTTTCGTAATCTCGGGATGCTGATCA
CTTTCTGTAATTTAAGTAGCTTGCTGCCGCTGCCGTTCTTGAGGTGGATC
GATTCCGTAGAAGAGGACAGGCAGGCTCTTTTCGAAGAATCCGCCTCGCG
AGAAGGCAACAATAGGGATAAGGAGCTCTTGAACAAGTCAAACAAGAAGT
AGCTGATTCTGGTATACCACGTGAACCGAGGTCTGGGCATCCCAGACGAG
CTCTTCACGTTTGGGGATGAGGTCATTCTGGCGGTGCTCGGGCAGGTCGC
CTTTATGCCAACCCTTGTGCTCGCAGCAAGGTTGTGTCCTCCCGGGGTAG
AAGGGACGTTGTTCGCGTTGCTCATGTCTACCTTTAACGGCGGGGCCATC
GTTGGCAGCGAGCTAGGGGCGTACCTCACGAAAGCAGTGGGAATCACGGA
GTCTGACTTTCGTAATCTCGGGATGCTGATCACTTTCTGTAATTTAAGTA
GCTTGCTGCCGCTGCCGTTCTTGAGGTGGATCGATTCCGTAGAAGAGGAC
AGGCAGGCTCTTTTCGAAGAATCCGCCTCGCGAGAAGGCAACAATAGGGA
TAAGGAGCTCTTGAACAAGTCAAACAAGAAGTAG
back to top