mRNA_P-fluviatile_contig18.3119.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3119.1
Unique NamemRNA_P-fluviatile_contig18.3119.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 8.950e-74
Identity = 164/219 (74.89%), Postives = 179/219 (81.74%), Query Frame = 1 
Query:  103 RSRSTTSMNLWSDAVKCAPAVLLGVALTTSAPLLENGTTAFGCTLGVAPAYATSAPGDKGMSSVSDSKLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGCP 759
            R R  T MNL++DA +C PAVLLGV LTTSAPLL++   A    LG +P +A     DKGMSSVSDSKLS+GAASTGDKGARKTVTRGVNIENADYH KD+S VSFQQSLVRGTNFK            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAYVSGATKMEPA +EGADFTDTFLRKDQV+YLC LE+A+GTNPV+G+DTRDSLGCP
Sbjct:   33 RGRQVT-MNLFNDAARCVPAVLLGVTLTTSAPLLDSPA-AHTAVLGASPVFAD----DKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.140e-45
Identity = 117/172 (68.02%), Postives = 131/172 (76.16%), Query Frame = 1 
Query:  241 VAPAYATSAPGDKGMSSVSDSKLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            VAP +A      +G SSVSD+K+  GAAST D G+RK +TRGVN+ENAD+HGKDMSGVSFQQSLVRGTNF                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX  YVSGATK EP ++EGADFTDTFLRKDQ+ YLC +  A+GTNPVTG+DT DSL C
Sbjct:   63 VAPGFAMQPAAKEGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAI--AKGTNPVTGVDTADSLSC 232
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.400e-29
Identity = 87/171 (50.88%), Postives = 117/171 (68.42%), Query Frame = 1 
Query:  247 PAYATSAPGDKGMSSVSDSKLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPA-NVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            PA+A     D+G ++ S++K++ G AST   G    +TRGVN++N+++ G+++ GV+FQQS+VR +NFK   X XXXXXXXXXXXXXXXXXXX                     E YVSGAT  E   ++EG+D+++TFLRKDQ KYLCE  +A+GTNPVTG+DTR+SL C
Sbjct:   68 PAFA-----DQGATAASNAKITTGGASTLQSGRTIAITRGVNLDNSNFXGQNLKGVAFQQSIVRDSNFKGANXVXXXXXXXXXXXXXXXXXXXTLSNVEMAQFNRANLKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S2CVZ3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.010e-28
Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 1 
Query:  193 APLLENGTTAFGCTLGVAPAYATSAPGDKGMSSVSDSKLSLGAAST--GDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGCP 759
            AP       A    L   PA+A S   D G S+V ++K+  G AST    +GARKT+TRGV ++ A++ G+D++GVSFQQS +RG  F+               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GAT  + A +EGADFTDTFLRKDQ K LC   +A+GTNP TG+DTRDSL CP
Sbjct:   23 APAAAASALAAALLLSATPAFAES---DGGASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCA--TAKGTNPTTGVDTRDSLMCP 208
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S3Y7I5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 1.090e-26
Identity = 111/181 (61.33%), Postives = 136/181 (75.14%), Query Frame = 1 
Query:  226 GCTLGVAPAYATSAPGDKGMSSVSDSKLSLGAAST-GDKGARKT---VTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            G  +GVA + A         +  SDSK++ GAAST GDKG        TRGV ++ +D+ GKD+SGVSFQQS+VR TNF XXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAY+SG+T +   N++ +D+TDTF+RKDQ++YLC++ S  GTNP TG+ TR+SLGC
Sbjct:   68 GALMGVAASTAAMNMNGARANLASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 246
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S2TUI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 1.590e-26
Identity = 111/184 (60.33%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:  217 TAFGCTLGVAPAYATSAPGDKGMSSVSDSKLSLGAAST-GDKGARKT---VTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            T  G  +G   A  ++A      +  SDSK++ GAAST GDKG        TRGV ++ +D+ GKD+SGVSFQQS+VR TNF XXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAY+SG+T +   N++ +D+TDTF+RKDQ++YLC++ S  GTNP TG+ TR+SLGC
Sbjct:   67 TLLGALVGTVAAGTSAAMSRAKANLASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 248
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S0MF80_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MF80_9CRYP)

HSP 1 Score: 114 bits (286), Expect = 1.790e-26
Identity = 106/152 (69.74%), Postives = 123/152 (80.92%), Query Frame = 1 
Query:  304 KLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGCP 759
            K+  GAAST D G R+T+TRG  +E  ++ G+ + G+SFQQSL R  NFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Y+ G TK++   +EGADFTDTFLRKDQ+KYLC    A+GTNP TG+ T +SLGCP
Sbjct:  105 KVLKGAASTQDSGTRRTITRGTVLEGGNFAGQKLVGISFQQSLCRDCNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYILGTTKLDGVQIEGADFTDTFLRKDQIKYLCAR--AKGTNPTTGVSTTESLGCP 254
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S1BVJ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVJ1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.980e-26
Identity = 91/166 (54.82%), Postives = 111/166 (66.87%), Query Frame = 1 
Query:  262 SAPGDKGMSSVSDSKLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPA-NVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            S+  D G + VS+ K++ G AST   G   T+TRGVN++ AD+ G+ + GV+FQQS+VR  N  XXXXXXXXXXXXXXXXXXXXXXXXXX                   EAYV G T      ++EGADF+DT+LR DQ KYLCE  +A+GTN VTGMDTR+SL C
Sbjct:   36 SSAADNGATDVSNQKITTGGASTLQSGRTITITRGVNLDRADFGGQKLKGVAFQQSIVRDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLEMCQLNRANLRDAVVREAYVGGTTMFTGIKSIEGADFSDTYLRADQKKYLCEHPTAKGTNSVTGMDTRESLMC 201
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S0TH33_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TH33_HEMAN)

HSP 1 Score: 112 bits (279), Expect = 1.680e-25
Identity = 96/151 (63.58%), Postives = 114/151 (75.50%), Query Frame = 1 
Query:  304 KLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGC 756
            K+  GAAST D G+R+T+TRG  ++N+ + G+ + G+SFQQSL R  +FK       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAY+   TK++  N+EGADFTDTFLRKDQ +YLC   S  GTNP TG+DT DSL C
Sbjct:   89 KVLQGAASTQDSGSRRTITRGATLDNSRFDGQKLDGISFQQSLCRDCDFKGASLKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVNEAYILATTKLDGINIEGADFTDTFLRKDQQRYLCSRAS--GTNPKTGVDTYDSLLC 237
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BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Match: A0A7S1QSD0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QSD0_ALECA)

HSP 1 Score: 111 bits (277), Expect = 2.650e-25
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 1 
Query:  301 SKLSLGAASTG-DKGARKTVTRGVNIENADYHGKDMSGVSFQQSLVRGTNFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPVTGMDTRDSLGCP 759
            SK+  G AST    G RK +TRG+N+E A+Y G+D+SGVSFQQS+VR     XXXXXXXXXXXXXXXXXXXXXXX                      + YV+G T+MEP  ++GADFT T  RKDQ+ YLC++  A GTNPVT +DTR+SL CP
Sbjct:   89 SKIKAGGASTSAGLGTRKIITRGINLEKANYAGQDLSGVSFQQSIVREXXXXXXXXXXXXXXXXXXXXXXXXXXXMTQANLELARATDAIFTNAIATDMYVNGTTRMEPKRIDGADFTGTIFRKDQLNYLCKI--AEGTNPVTKVDTRESLMCP 240
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U8_ECTSI8.950e-7474.89Thylakoid lumenal 15 kDa protein, chloroplast (P15... [more]
A0A835YUD1_9STRA4.140e-4568.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZI41_9STRA5.400e-2950.88Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2CVZ3_9STRA4.010e-2854.97Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3Y7I5_9EUKA1.090e-2661.33Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2TUI3_9EUKA1.590e-2660.33Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0MF80_9CRYP1.790e-2669.74Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1BVJ1_9STRA1.980e-2654.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0TH33_HEMAN1.680e-2563.58Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1QSD0_ALECA2.650e-2555.19Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:210953..215438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.7
Seed ortholog evalue5.2e-60
Seed eggNOG ortholog2880.D7G7U8
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009543,GO:0009579,GO:0016020,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.Pentapeptide repeats (9 copies)
EggNOG OGs2QQA1@2759,COG1357@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionThylakoid lumenal 15 kDa protein, chloroplast precursor (p15)
Ec32 orthologEc-06_000240.1
Exons7
Model size978
Cds size639
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815751.1769865-UTR-P-fluviatile_contig18:210952..2110751622815751.1769865-UTR-P-fluviatile_contig18:210952..211075Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 210953..211075 +
1693563184.3489113-UTR-P-fluviatile_contig18:210952..2110751693563184.3489113-UTR-P-fluviatile_contig18:210952..211075Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 210953..211075 +
1622815751.2777314-UTR-P-fluviatile_contig18:215222..2154381622815751.2777314-UTR-P-fluviatile_contig18:215222..215438Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 215223..215438 +
1693563184.4270937-UTR-P-fluviatile_contig18:215222..2154381693563184.4270937-UTR-P-fluviatile_contig18:215222..215438Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 215223..215438 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815751.1872244-CDS-P-fluviatile_contig18:211075..2110941622815751.1872244-CDS-P-fluviatile_contig18:211075..211094Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 211076..211094 +
1693563184.3646684-CDS-P-fluviatile_contig18:211075..2110941693563184.3646684-CDS-P-fluviatile_contig18:211075..211094Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 211076..211094 +
1622815751.1965687-CDS-P-fluviatile_contig18:211621..2118191622815751.1965687-CDS-P-fluviatile_contig18:211621..211819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 211622..211819 +
1693563184.374722-CDS-P-fluviatile_contig18:211621..2118191693563184.374722-CDS-P-fluviatile_contig18:211621..211819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 211622..211819 +
1622815751.212546-CDS-P-fluviatile_contig18:212443..2125021622815751.212546-CDS-P-fluviatile_contig18:212443..212502Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 212444..212502 +
1693563184.384246-CDS-P-fluviatile_contig18:212443..2125021693563184.384246-CDS-P-fluviatile_contig18:212443..212502Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 212444..212502 +
1622815751.222708-CDS-P-fluviatile_contig18:213080..2131561622815751.222708-CDS-P-fluviatile_contig18:213080..213156Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 213081..213156 +
1693563184.3936718-CDS-P-fluviatile_contig18:213080..2131561693563184.3936718-CDS-P-fluviatile_contig18:213080..213156Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 213081..213156 +
1622815751.2365768-CDS-P-fluviatile_contig18:213720..2138021622815751.2365768-CDS-P-fluviatile_contig18:213720..213802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 213721..213802 +
1693563184.4034524-CDS-P-fluviatile_contig18:213720..2138021693563184.4034524-CDS-P-fluviatile_contig18:213720..213802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 213721..213802 +
1622815751.2484837-CDS-P-fluviatile_contig18:214310..2143961622815751.2484837-CDS-P-fluviatile_contig18:214310..214396Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 214311..214396 +
1693563184.4125996-CDS-P-fluviatile_contig18:214310..2143961693563184.4125996-CDS-P-fluviatile_contig18:214310..214396Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 214311..214396 +
1622815751.2616987-CDS-P-fluviatile_contig18:215103..2152221622815751.2616987-CDS-P-fluviatile_contig18:215103..215222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 215104..215222 +
1693563184.4196982-CDS-P-fluviatile_contig18:215103..2152221693563184.4196982-CDS-P-fluviatile_contig18:215103..215222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 215104..215222 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3119.1prot_P-fluviatile_contig18.3119.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 211076..215222 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3119.1

>prot_P-fluviatile_contig18.3119.1 ID=prot_P-fluviatile_contig18.3119.1|Name=mRNA_P-fluviatile_contig18.3119.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=213bp
MNLWSDAVKCAPAVLLGVALTTSAPLLENGTTAFGCTLGVAPAYATSAPG
DKGMSSVSDSKLSLGAASTGDKGARKTVTRGVNIENADYHGKDMSGVSFQ
QSLVRGTNFKGSKLVAAGFFDADLSNCDFESANLNQANLELANLTGANMK
NAVVTEAYVSGATKMEPANVEGADFTDTFLRKDQVKYLCELESARGTNPV
TGMDTRDSLGCP*
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mRNA from alignment at P-fluviatile_contig18:210953..215438+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3119.1 ID=mRNA_P-fluviatile_contig18.3119.1|Name=mRNA_P-fluviatile_contig18.3119.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4486bp|location=Sequence derived from alignment at P-fluviatile_contig18:210953..215438+ (Porterinema fluviatile SAG_2381)
CGGAATTTTGTAGTGCTATTGTTCGTGGGTACAGTATCTATCTCGAAGGC
ATTTATTGTGACTCCAGCGTCATGTGTGGCAGGCGGTACAAACGCGAAAG
TACGCTCAAGATCAACAACATCGATGAACCTTTGGAGCGACGGTGAGAAC
GCCTTGTCACAGAGCCCCGCATACTCACGGGCCGCTCCCAGCGTGTGCTG
CTGCTCTTGTGTCTGCGATCGTTACGACGGTGGTTTCACTTGTTTCTCAC
ATGTTGGTCATGTGAAGCGAGATGGATTCCAAATGGTTACATTTTTGTGT
TGACTGCTGACGGGTTTGCAGGCTGGTCTAGACAGGAGAGCAACGGTAGA
GCGATGATCCATGTGCGAGCGCAAATACGGTTTGAACAACGCTTGTACTC
AAACTGCCGACCGACAGGTAGTTCGACCACCTATCTACCAACGTAGAATT
TGTAGCCGAAATGACGTCTGGCCAGTCGACAACATTTATCAGGCAACATC
CCTCCATCGCGCACAGGTTTCTGTAAGCCAACACGGCAGCAGCGATCCTA
CCATGATCATGTGCACCGGAGTCCGGATCACGTATGCGTAGCCCCGCCGC
TTGCCACCATGTCCTTCCCTTCCCACTTTAAACTTACGGCACAAATTAAT
CCAATCGTCAAAATTCCAGCGGTAAAGTGCGCTCCCGCGGTTCTCCTCGG
GGTGGCCCTGACTACATCGGCCCCGCTACTGGAGAACGGTACGACTGCCT
TTGGCTGTACTTTAGGCGTTGCCCCTGCCTACGCCACATCGGCTCCAGGC
GACAAGGGCATGTCTAGCGTCAGCGACTCCAAGCTTTCCCTTGGGGCCGC
AAGCACGGGGGACAAAGGTGATTGCGGTGGCAACCCATTGCGAACTAGTA
CCCTTGGTCGGCTTATGTTGTTGCGGCATGGGTGTTTACGTTCAAAGCAA
TTAGAGAGCCAGACCGCAAGCTGCCTACAACTGTACATTGTGCGGCTTGC
ATTCTTGCGGCTTGGGCTATAGCGGCTTGGGTTCAGACGTTCAAGACAAA
CATATTGGATTGAGGCCAAGCCACGATTGTGCTAATCCGAACCGCCTGTG
TCTTGCGGCTTGGGTTGTAGCGGCTTGGGTTGCAGACGTTCAACGCAAAT
CGACAGCAGAGAGGCCGCGATTGTGTCTGTGGTCTCGTCGTCGTATCGCC
CGTTGCCGCGGCCGGGATGTATGGGATCGCCGGCGACTATCAATTGATTT
TTGTGTTGGCGGCTCTTGCCCTCTTTTCCGCTGTGGGTTGCTAGAAAGGC
AACAGCATTGAATACCCGAAACTTGCTTGGAACATGGATGCCCTCAAGAT
GCACACTCACGAAGCCACAGGTTGCCTTGCAAGGCGAGTTGACCACTGAA
GGTTCTGAACCAACATCACCCCTTTCATCTTCGTCTTTTGTGCTCACTGC
GCGGGTATGTGCGACTTTCTTTGTCATTTTTACGTGGACAGGGGCACGAA
AAACAGTCACGCGCGGAGTCAACATCGAAAACGCAGATTACCACGGAAAG
GTGGGTCATCTGCTTCACGTGTGCCGTTGAGCGTGGATCCGGTACCTTCG
TCGTTCTTCGCAGTATCTTCCCTTCGTGCGTCTGTGTGCAATCATGTGTG
CTGTGGGGCGAGTCGAGAAATGCAGCAGTCGAAGTGGGAGTCCAACCATC
GTAAACGCAATGGCAATAAGGTTTAACTATAGTAGCGTTTTGCGGGTGGA
AGGGAGCAACTGTGATTGGCGTTCTACTGGCCTTGACGTTGTAAAGGTGT
TGGAAAGAATGTCTCCTCGACTCTCGCGCAGATTTATTTCAAATGGGTAA
TGTATTAGGTAAAGCATGGCGATTGTGGCTCTTGCTGCCGAAGGTCAAAG
TTTCGGCTCAATCGCCGTTTCCTCTCCATGTAACGTTGCAGCTCGGGATT
TTCCAACTTTTTTTTGTTCCTTGCATCCACAGATTGCTGTGCCTCATTGC
GGGTGATGCCCCGTTGAACAAGCACGGTATGTCCAAGCAAAACCCAAGTC
CACAGTCCTCTTTTTGCTTATTGTTCTCTTTCTTGCATCGGTGTATAACG
GAAACCGAACCCGCTGCCTCCCTCACAGGACATGTCTGGCGTGTCCTTTC
AGCAATCGCTAGTGAGAGGGACGAACTTCAAGGGTTCCAAGCTCGTGGCG
GCTGGTGGGTTTGTCTTCAAATCTTAGACGGGTTTCAGCATGGTGGGGCC
GTCTCGCATATCGAATTGACTGACTCGCAGGCACTGATTGCAAAAGCTGC
TCCGCGAGCGTTGCTTATCTAGCAAGCGATTTCTAAACGAGGAGCAATCT
CTGGTGTGTGAAACCAGTATGACCCAAGCTGTTTCACTTGCAGTTGCTGG
AAACACAGGCGGTTGAGATGTAGGGGGTTCGTCTTCGGCGGCGCTTTTTA
AGCATGCTTGGTGTGAGGGTGTTGGCGCACGCTGTGCCGTAGGTGGCCGT
GTTGATGTTACCATTCCGCGTAGAATATCCATTTGGTAGGTGATCATTTG
TTGAAAACCAATCAGACCAAGTATTTTATAAACTGGACTACCCTCGAAGT
TGCGGCAGACTTGCTTCTGAACGGATCACCCAAGTGCAAACGGACCACGC
TTCTCTTGTGAGTGCTCATCGTACACACGTGGTTTTAACTATACGCTGTT
GCCGAAAACCTAGATACTCGCGATTTTCTACGACGTGCGCGTCTTGTTTG
ATGGGCGTACTTTATCAGGTTTCTTCGATGCTGACCTGTCCAATTGCGAC
TTCGAGTCGGCCAACCTGAACCAGGCCAACTTGGAGCTCGCCAACTTGAC
GTGAGTTGCGCGTGCGCTACCTACTCCTGCAGGAATCGTCCCGCACGTGT
TGAAAAATCTTTAAAAGGCACTATGCCTTTTGGTTCCGATTGGAACGGTT
GTTTGGCGTGCGTACGAGCTATTTAATGTGCGGACAGAAGCGAATTGAAG
ATCGCGACGGCGGCGAACTGGCGTACAAAGCGCCGAAAAAATGTCAGGAG
CTATGCATGTATGCTGATACCTTGGGGTTCAGAGAGATGGCCGTACGAAG
TGTACGACCCGGGGATTATGGTCATTTTGCGGAGTGCAACCAATAAATGT
AGCAAATACATTTCGAAGGTATGATATGTGATGTATCACATGCCTTGATT
ACCGTGTTTGACGTCGTATGACTACTGTTTCGCCGTGGGGTATCTTGACA
ATTTGACGCAAATTTCGTATGCATTCTACTTTTTTATCTTGGTTCGTGGG
GGAAACGGGGCTCCGTCATCGTCAACGTCCCCACGGGGATCGGTCTTCTC
TCCACCAGCGGTGCTAACATGAAAAACGCTGTGGTGACGGAGGCGTATGT
CTCGGGGGCCACGAAAATGGAGCCGGCGAATGTGGAGGGGGCAGGTGAGG
ACGTTGGAGATGGAGTGTCGGCCATACCTACTGCACGTGTTCCGAATACA
TGGCTGTTGTAAAAATTTAAAGCCAGTACTGTTGCATGTTCGTTGCCGAT
GAAAAACGGGTGCCTGGTTTACGCTGTCACACCCCTTTATCCCTCCCCAA
AAGTGACGTTGTTGCCGTTTTGTGAAGGAGTTGCACATGGCGTTTTTTGG
GCCCAAGTATGGAACTCAAATCGCGCTTTCATTGGTGGTGCACGTTGCCT
AGCCAAGTTTGAAACTCAAATCGGGCGGCCAACCCAAGCACATCACGCCG
CTGCAAGATGAGATGTTTCTCCTCCCCCGGTTGTCGGGATCAGTCGCACT
CCCTTCCCGGTGGGGGATTGTTTGTGATCTGCCCAGGCAGGGAGAGTTGA
CCAGGCCACGCGAACAAACCAGCGGGCACGGCTTCGTCAGGCCCGGTCAC
CTTCGATCGTTCAAATGTCCTGTTGAGGCGTGTCATCTTTGAGAACCAGA
CCGGCACGAAATCGGCCCCTCCGAAATGTCATGTCGCCTGTCTCCCGCGA
AGTATGCCGATTTTACGGTCCCACGATGTCCTTGATGGTATTTTACCTTT
CACCGAATTCCCGCTGGCTGGACGCTTTCATTCTAACCTGGTGTTGCTGG
TGTTGGGGTACTGGTGTCTGCCGGAAAACATGATAATGCCGACACGGACA
GATTTCACGGATACATTCCTGAGGAAAGACCAGGTCAAGTACCTGTGCGA
GCTCGAAAGCGCCAGAGGCACGAACCCTGTTACAGGGATGGACACGAGGG
ACAGCCTGGGCTGCCCTTGAGATGCCCATGCCATTGCTGAAGAAAGTTGG
TTGTGTTGTGCAGTGAGTTGACTAGATACCCGGAGACCTTGACGTCTGAG
ATGCTGGAACTTTGAATCTTATGCAGACGGCTTTCCTCGTGAAGCCAGCG
CCATGACCGTCGGCTGAGGCAACCGCAATCACGTAAACCACATCGCATTT
TTTTCCTCCGCGGAGAAGGATGGACAGGATAGGGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:210953..215438+

>mRNA_P-fluviatile_contig18.3119.1 ID=mRNA_P-fluviatile_contig18.3119.1|Name=mRNA_P-fluviatile_contig18.3119.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1278bp|location=Sequence derived from alignment at P-fluviatile_contig18:210953..215438+ (Porterinema fluviatile SAG_2381)
ATGAACCTTTGGAGCGACGATGAACCTTTGGAGCGACGCGGTAAAGTGCG
CTCCCGCGGTTCTCCTCGGGGTGGCCCTGACTACATCGGCCCCGCTACTG
GAGAACGGTACGACTGCCTTTGGCTGTACTTTAGGCGTTGCCCCTGCCTA
CGCCACATCGGCTCCAGGCGACAAGGGCATGTCTAGCGTCAGCGACTCCA
AGCTTTCCCTTGGGGCCGCAAGCACGGGGGACAAAGCGGTAAAGTGCGCT
CCCGCGGTTCTCCTCGGGGTGGCCCTGACTACATCGGCCCCGCTACTGGA
GAACGGTACGACTGCCTTTGGCTGTACTTTAGGCGTTGCCCCTGCCTACG
CCACATCGGCTCCAGGCGACAAGGGCATGTCTAGCGTCAGCGACTCCAAG
CTTTCCCTTGGGGCCGCAAGCACGGGGGACAAAGGGGCACGAAAAACAGT
CACGCGCGGAGTCAACATCGAAAACGCAGATTACCACGGAAAGGGGCACG
AAAAACAGTCACGCGCGGAGTCAACATCGAAAACGCAGATTACCACGGAA
AGGACATGTCTGGCGTGTCCTTTCAGCAATCGCTAGTGAGAGGGACGAAC
TTCAAGGGTTCCAAGCTCGTGGCGGCTGGACATGTCTGGCGTGTCCTTTC
AGCAATCGCTAGTGAGAGGGACGAACTTCAAGGGTTCCAAGCTCGTGGCG
GCTGGTTTCTTCGATGCTGACCTGTCCAATTGCGACTTCGAGTCGGCCAA
CCTGAACCAGGCCAACTTGGAGCTCGCCAACTTGACGTTTCTTCGATGCT
GACCTGTCCAATTGCGACTTCGAGTCGGCCAACCTGAACCAGGCCAACTT
GGAGCTCGCCAACTTGACCGGTGCTAACATGAAAAACGCTGTGGTGACGG
AGGCGTATGTCTCGGGGGCCACGAAAATGGAGCCGGCGAATGTGGAGGGG
GCAGCGGTGCTAACATGAAAAACGCTGTGGTGACGGAGGCGTATGTCTCG
GGGGCCACGAAAATGGAGCCGGCGAATGTGGAGGGGGCAGATTTCACGGA
TACATTCCTGAGGAAAGACCAGGTCAAGTACCTGTGCGAGCTCGAAAGCG
CCAGAGGCACGAACCCTGTTACAGGGATGGACACGAGGGACAGCCTGGGC
TGCCCTTGAATTTCACGGATACATTCCTGAGGAAAGACCAGGTCAAGTAC
CTGTGCGAGCTCGAAAGCGCCAGAGGCACGAACCCTGTTACAGGGATGGA
CACGAGGGACAGCCTGGGCTGCCCTTGA
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