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Homology
BLAST of mRNA_P-fluviatile_contig18.3224.1 vs. uniprot
Match: D8LF55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF55_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 1.110e-131 Identity = 292/473 (61.73%), Postives = 337/473 (71.25%), Query Frame = 3
Query: 120 MSGKRTLSLSAYKKSKEALAAAPSAKERRLGFGESVSTREARAQQLQVETQVIGRLDELLKQCGKEPSSSQAISNWLCAEGVEGHAKKGLSRILCYVKVWSRVLRSEGVAPKTKAEIDVAEVRARAAFGACVSAINAVDSLSYRLSEKNNARNGEMELVKVAGQVLAGMVEAMLGPGAKPRARGLHPTELAQLSRMADSWKERGALPPPSFESVEERLSALRSSDAA-----ENGSGTARSSKVWTKNQTKRAAWVQMPTAPAAAVWSADG--APGG---LSPPR-PRSSGADAVTGSRLPAAAPRTDEEYAASVEAALKELLAPDIVMVGGWWAQAFQGSGPFPQGPEGCWSLQFQRANEDPGVRQLQAMGSLDVNGDHRGDFAGGGLDRRGVKTE--GVDGKDSDG-TPSTPSTVPSEASPSPERASPPQEVKLEAGKDLD-----AKPLAAGGDSNGTAAVAAVSTPEAG 1481
MSGKR +SLSAYKK+K ALA P KERRLGFGESVSTREARA +LQ+ETQVIGRLD LLK+CG++P S QAISNWLCAEG+EGHAKKGLSRILCYV+VWSR LR+EGVAPK K + D AEV+ARAAFGACV AINAVDSLSYR +EK + E ELVK AG+VLAGM+EA++G G+KPR RGLHPTE AQLSRM D+W RG++P PS ES+ ++L AL A NG AR+ K K+ KRAAWV++P A AA S++G +PG LSPPR P S GA S AAP+T+ E AS+E+ L +LLA ++ + G WWAQAFQG GPFPQGPEGCWSLQ+QRANEDPG R+ Q G + NGD R AG G+D VKTE G DG DSDG PSTPSTVPSEASPSPER EVK E GKD A P NGTAA AA + G
Sbjct: 1 MSGKR-ISLSAYKKNK-ALAVTPKKKERRLGFGESVSTREARAHELQLETQVIGRLDSLLKRCGRDPGSDQAISNWLCAEGLEGHAKKGLSRILCYVRVWSRTLRAEGVAPKDK-DRDKAEVKARAAFGACVCAINAVDSLSYRFAEKKTP-DAENELVKTAGEVLAGMMEAVVGAGSKPRRRGLHPTEHAQLSRMVDAWLRRGSVPSPSLESIGKQLLALDPGGDAVVSPDRNG---ARAGKG--KSSKKRAAWVRVPAA-AAIGDSSEGKQSPGDVARLSPPRHPSSGGAGGPAASA--GAAPQTEAERHASLESVLTDLLARNVAVPGAWWAQAFQGGGPFPQGPEGCWSLQYQRANEDPGHRRNQVTGLIGANGDRRLG-AGSGVDLGSVKTEAAGADGLDSDGGAPSTPSTVPSEASPSPERVXXVPEVKTEGGKDSATISPAAAPATVRSVENGTAAPAAARAQKGG 460
BLAST of mRNA_P-fluviatile_contig18.3224.1 vs. uniprot
Match: A0A6H5JK50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK50_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 4.870e-124 Identity = 416/848 (49.06%), Postives = 487/848 (57.43%), Query Frame = 3
Query: 120 MSGKRTLSLSAYKKSKEALAAAPSAKERRLGFGESVSTREARAQQLQVETQVIGRLDELLKQCGKEPSSSQAISNWLCAEGVEGHAKKGLSRILCYVKVWSRVLRSEGVAPKTKAEIDVAEVRARAAFGACVSAINAVDSLSYRLSEKNNARNGEMELVKVAGQVLAGMVEAMLGPGAKPRARGLHPTELAQLSRMADSWKERGALPPPSFESVEERLSALR--SSDAAENGSGTARSSKVWTKNQTKRAAWVQMPTAPAAAVWSADG--APGG---LSPPRPRSSGADAVTGSRLPAAAPRTDEEYAASVEAALKELLAPDIVMVGGWWAQAFQGSGPFPQGPEGCWSLQFQRANEDPGVRQLQAMGSLDVNGDHRGDFAGGGLDRRGVKTEGVD--GKDSDG-TPSTPSTVPSEASPSPERASPPQEVKLEAGKDLD-----AKPLAAGGDSNGTAAVAAVSTPEAGVAQASNKEKASXXXXXXXXXKGSSSPIEPVLSKRERXXXXXXXXXXXXXXXGKEMGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-TDELARRSKAAEHXXXXXXXXXSTT----REREKYRRRDKPAGKSTDEPKRDAGAEHSRHDHRDGGNKA-----SEGQHRMRDRERRNRAAGGGNWEASAADAERAFGGQERDDSRRRGASADNRGRLAKEDRERGKGTDHAAVSRRDRDEGRPHHDLGDSRDTGWEIRGRGHQDSHEQPPRGDDRGTGDDARRRGSSSQPTREARLSVDGGRPGLD-SREREVAGDKGERKRRRGDLSESEGVGASIRRGGDSRHHDERGGEDERSSS-HRPSKKKS 2582
MSGKR +SLSAYK++K ALA P ERRLGFGESVSTREARA +LQ+ETQVIGRLD LLK+CG++P S QAISNWLCAEG+EGHAKKGLSRILCYV+VWSR LR+EGV+P+ K D AEV+ARAAF ACV AINAV+SLSYR +EK + +GE ELVK AG+VLAGM+EA+LG G+KPR RGLHPTE AQLSRM D+W +RG++P PS ES+ ++L AL AR+ K T N KRAAWV++P A AA S +G +PG LSP R SSG AAP+T+ E AS+E+ L ++LA ++ + G WWAQAFQG GPFPQGPEGCWSLQ+QRANEDPG R+ Q G + +GDHR AG G+D VKTE D G DSDG PSTPSTV E K E GK+L A P G NGT A AA + G XXX XXXXXXXXXXXXXX GKE XXXXXXXXXXXXX XXXXXXXXXXXX + D LARR+K XXXXXXXXX R REK RRR + G++ +E + ++G+ RD + R G+ +D+ R A+ GRL KEDRERG A RRD+ EGR HHDL + RG SSSQ RE + +G R D SRERE GERKRRR DLSESEG S R D RH D+ +D SSS HRPSKKKS
Sbjct: 1 MSGKR-ISLSAYKRNK-ALAGTPKKNERRLGFGESVSTREARAHELQLETQVIGRLDSLLKRCGRDPGSDQAISNWLCAEGLEGHAKKGLSRILCYVRVWSRTLRAEGVSPQDK---DKAEVKARAAFRACVCAINAVNSLSYRFAEKKKSPDGENELVKTAGEVLAGMMEAVLGAGSKPRRRGLHPTEHAQLSRMVDAWLQRGSVPLPSLESIGKQLLALDPGGDPVVSPDRNGARAGKGKTSN--KRAAWVRVPAA-AAIGDSLEGKQSPGDVARLSPLRHHSSGGXXXXXXXXXGAAPQTEAERHASLESVLTDVLARNVAVPGAWWAQAFQGGGPFPQGPEGCWSLQYQRANEDPGHRRNQVTGLIGADGDHRFG-AGSGVDLGSVKTEAADADGLDSDGGAPSTPSTVXXXXXXXXXXXXXXXEAKTEEGKNLATISPAAAPATVGSVENGTVAPAAARAQKGGA----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKEXXXXXXXXXXXXXXXXXMQRQEMIAASRXXXXXXXXXXXXGKEAKERADSLARRTKLXXXXXXXXXXXXXXXXXXXRGREKDRRRYQARGEAGEESRXXXXXXXXXXXXXXXXXXXXXXXXADGRGASRDNKER-------------------MSGRGKDEGRHSDAA----GRLDKEDRERGGAEGDRASGRRDKAEGRRHHDLVEG------SRGGXXXXXXXXXXXXXXXXXXXXXXXXXSSSQRAREPDFAAEGVRRKSDNSREREG----GERKRRRSDLSESEGASISARH--DDRHPDDHAEDDHNSSSTHRPSKKKS 788
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-06_001750.1 |
| Exons | 6 |
| Model size | 3849 |
| Cds size | 2616 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815746.4375196-UTR-P-fluviatile_contig18:1215355..1215654 | 1622815746.4375196-UTR-P-fluviatile_contig18:1215355..1215654 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1215356..1215654 - |
| 1693563174.8154407-UTR-P-fluviatile_contig18:1215355..1215654 | 1693563174.8154407-UTR-P-fluviatile_contig18:1215355..1215654 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1215356..1215654 - |
| 1622815746.451386-UTR-P-fluviatile_contig18:1216048..1216863 | 1622815746.451386-UTR-P-fluviatile_contig18:1216048..1216863 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1216049..1216863 - |
| 1693563174.8301733-UTR-P-fluviatile_contig18:1216048..1216863 | 1693563174.8301733-UTR-P-fluviatile_contig18:1216048..1216863 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1216049..1216863 - |
| 1622815746.5210264-UTR-P-fluviatile_contig18:1221311..1221392 | 1622815746.5210264-UTR-P-fluviatile_contig18:1221311..1221392 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1221312..1221392 - |
| 1693563174.8719018-UTR-P-fluviatile_contig18:1221311..1221392 | 1693563174.8719018-UTR-P-fluviatile_contig18:1221311..1221392 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1221312..1221392 - |
| 1622815746.5325572-UTR-P-fluviatile_contig18:1221817..1221855 | 1622815746.5325572-UTR-P-fluviatile_contig18:1221817..1221855 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1221818..1221855 - |
| 1693563174.8796692-UTR-P-fluviatile_contig18:1221817..1221855 | 1693563174.8796692-UTR-P-fluviatile_contig18:1221817..1221855 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 1221818..1221855 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815746.465083-CDS-P-fluviatile_contig18:1216863..1219038 | 1622815746.465083-CDS-P-fluviatile_contig18:1216863..1219038 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1216864..1219038 - |
| 1693563174.8386488-CDS-P-fluviatile_contig18:1216863..1219038 | 1693563174.8386488-CDS-P-fluviatile_contig18:1216863..1219038 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1216864..1219038 - |
| 1622815746.4771159-CDS-P-fluviatile_contig18:1219889..1220046 | 1622815746.4771159-CDS-P-fluviatile_contig18:1219889..1220046 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1219890..1220046 - |
| 1693563174.8467968-CDS-P-fluviatile_contig18:1219889..1220046 | 1693563174.8467968-CDS-P-fluviatile_contig18:1219889..1220046 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1219890..1220046 - |
| 1622815746.4884906-CDS-P-fluviatile_contig18:1220365..1220529 | 1622815746.4884906-CDS-P-fluviatile_contig18:1220365..1220529 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1220366..1220529 - |
| 1693563174.8549342-CDS-P-fluviatile_contig18:1220365..1220529 | 1693563174.8549342-CDS-P-fluviatile_contig18:1220365..1220529 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1220366..1220529 - |
| 1622815746.503379-CDS-P-fluviatile_contig18:1221191..1221311 | 1622815746.503379-CDS-P-fluviatile_contig18:1221191..1221311 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1221192..1221311 - |
| 1693563174.8625982-CDS-P-fluviatile_contig18:1221191..1221311 | 1693563174.8625982-CDS-P-fluviatile_contig18:1221191..1221311 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 1221192..1221311 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3224.1 >prot_P-fluviatile_contig18.3224.1 ID=prot_P-fluviatile_contig18.3224.1|Name=mRNA_P-fluviatile_contig18.3224.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=872bp
MSGKRTLSLSAYKKSKEALAAAPSAKERRLGFGESVSTREARAQQLQVET
QVIGRLDELLKQCGKEPSSSQAISNWLCAEGVEGHAKKGLSRILCYVKVW
SRVLRSEGVAPKTKAEIDVAEVRARAAFGACVSAINAVDSLSYRLSEKNN
ARNGEMELVKVAGQVLAGMVEAMLGPGAKPRARGLHPTELAQLSRMADSW
KERGALPPPSFESVEERLSALRSSDAAENGSGTARSSKVWTKNQTKRAAW
VQMPTAPAAAVWSADGAPGGLSPPRPRSSGADAVTGSRLPAAAPRTDEEY
AASVEAALKELLAPDIVMVGGWWAQAFQGSGPFPQGPEGCWSLQFQRANE
DPGVRQLQAMGSLDVNGDHRGDFAGGGLDRRGVKTEGVDGKDSDGTPSTP
STVPSEASPSPERASPPQEVKLEAGKDLDAKPLAAGGDSNGTAAVAAVST
PEAGVAQASNKEKASASKDEGEGEKGSSSPIEPVLSKREREEQERRRRKE
EARRAGKEMGKAKALERERQKKERELQRQEMIAEARKKKAEYEAAKREKE
AKEQTDELARRSKAAEHEHEHEHQEPSTTREREKYRRRDKPAGKSTDEPK
RDAGAEHSRHDHRDGGNKASEGQHRMRDRERRNRAAGGGNWEASAADAER
AFGGQERDDSRRRGASADNRGRLAKEDRERGKGTDHAAVSRRDRDEGRPH
HDLGDSRDTGWEIRGRGHQDSHEQPPRGDDRGTGDDARRRGSSSQPTREA
RLSVDGGRPGLDSREREVAGDKGERKRRRGDLSESEGVGASIRRGGDSRH
HDERGGEDERSSSHRPSKKKSKKDKRDRKDKRGTGTWTSPPRGPRGRAAR
SRHPALALASARGTSTGPSRR* back to topmRNA from alignment at P-fluviatile_contig18:1215356..1221855- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig18.3224.1 ID=mRNA_P-fluviatile_contig18.3224.1|Name=mRNA_P-fluviatile_contig18.3224.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6500bp|location=Sequence derived from alignment at P-fluviatile_contig18:1215356..1221855- (Porterinema fluviatile SAG_2381)
TGGACTGTTAACCAAACAGGACACCGGCCCGTGTCGAGGTACGTCGCGAG
AAGTATAGTGTGGATTGGCGCTGACATGTGACTTGTCTTAGTCGCTTTAG
CCAGCGATCGGGGGCGGAATGTCCGATGCGTGTGCGTCGAATATCCTGGA
CGCTGATGCCGTCGGCTGAGGGAAATGTGCTCATGGCCGCGACTCATAGT
ATGACTGTCCGAGGGTGAAGGCCAGCGGGATGCAAGCGTCCCGGCCAGCA
CTAGGCATCCTGTCGTTCTCCTTGCGCCCAATCTTCTGCTTTCGAAAGAA
ATCTTCGATGAGGGGACTCTTTTCCCTTTTTCTCTGTTGGGCTGCCTGCA
GCGCTCGGAGTGGTGCATTTGCAGCGGTGTTGCACACACACCCACATACA
TCCTTCCCTCCGCATCTCCGCGCGCGTCCGCAATTCGCGCGATCTTTTAC
ATTTGAACCGCAGTCCAGAGAAGGACAACGGCCGCGCTGTAGCGGGCCCA
GGGCCGGCCCTATCGGTTGACCTCCCTGAGGAGATCTATCCGGCATGTCG
GGCAAGAGGACGCTGTCGCTCTCAGCATACAAGAAAAGCAAGGAGGCGCT
CGCCGCTGCACCATCAGCGAAGGAGCGGCGGCTAGGCTTTGGCGAATCAG
TCAGCACGCGGGAGGTAATTTTGATGTTCTCCTTGCATTTTTGCGTGCTC
CGGTGGGATCCCCATGAATGACGTTAACTCGCAGGGAGCCACTCCAAGGA
AGGCAAGAGAAGAAACTCAAGAGCGAGACAAATCATTCTTGAGCGCGTTC
TGCTGTGCACGACCGAGTGACGTCGATGCCTCTCGCTCGCTCGCACGAAC
ATTGCCAACCATCGCGTTACCTGTGCCCGTAGATCCCGAACCGAACACGA
AAGCATGAAATGTCTTATCTCCCTAGAGTAAGCTTCTGAAATCAGGGGAA
TATAAAGGAAACGTTTCCTTTGAGCGGTGTACTTCAGCCACAAGGCCATG
TTTCTTGCTTTGACGAACAACGCCGATGACCAAAGGTCAACCCTGGGGTT
AATTGGGGTTATCATGTGTGCCGGTGCCGCGCGTGTCGTCCGCCTTTCGT
TTCCCTTGGTATTCTTGCTCATGCACTATGCTCAGACCCGCTGTGACAAA
GCTCGGCACAGACGCTGGCAGAAGCGACCAAATATGGTTTATGGAGCTAT
TTTTTATGTCACATCAGTGACCGGTTCAAAAGAGCAGGGGAGCGTTTTCG
CATAGCGACCCTGGGCTTCCAGCTCCATTGAAATTGCGCTGGTAGATGAC
CGAATTTGCGTTGCCGCTTGATGCAGGCTCGTGCACAGCAGCTCCAGGTG
GAGACCCAAGTCATCGGGCGTCTCGATGAGCTGCTGAAGCAATGTGGCAA
GGAACCGAGCTCCTCCCAGGCGATCAGTAACTGGCTCTGCGCGGAGGGGG
TTGAAGGACATGCTAAGAAGGGCCTGTCTAGGATTCTCTGGTGGGCGGGC
TCGGGAAATGCGTCACTCGGTGTCCCTGCTCTTATCTCTACAATGATTGT
TCAAATCAAATCTGGTCAGCGTTGGGGCGTGGTCGTTTTTTTAAGCATAT
TTGTGGCTTCCTAGGCATGCGAAGATTCCCGATGAACACACAAATGGCGT
TCGCCTCGTTTCACCGTTATTCTTGCGCGCCATCCATTTACCCGCTGTCT
TCCGCCAATGTATCGCTCTCCTCACCTTCTTTCCCTTCCACTCCCTCCCC
TCGTCTCTCTCTCCCTCGACCACGATCATAATTCGTGCTCTTCGCGGCGG
CTTGATCAGCTACGTGAAGGTCTGGTCCCGGGTTCTCCGGTCGGAAGGCG
TGGCGCCGAAGACAAAGGCGGAGATTGACGTGGCGGAGGTTCGCGCAAGG
GCAGCGTTCGGCGCCTGTGTGTCCGCGATCAATGCTGTGGACAGTTTATC
CTACAGATTGTCGGAGGTGAAGGGAGGGGGGGCGGAGTACTCAAGTTGCG
CATGCTATAGCCGTTAGGCAAGAGAACTCTCATCCCTTTGCGCCGGGACG
GAGGAATTTGTCGGGTTTTCGCCGGCCCAGGCTCGCATTTACCAAGCACG
AAGCGCCCCGATGCATTCGGCGAGTCGCATGAAGGTTGAGTACCATCCTA
CCACGAGTGTTCGGCCAAAGGCTTACTCATGTTGCATTTGGATGATAGCT
TCCAGTGAGTTGTCAGTTAAGAGAAACCATTGGTAGATGGTACGGCAGTA
TCTCGCGGGCGCATCACCATTTCAACAATGTGAAGGACAACGATGCCCTA
TGTGCGGAGTTGAATTCTCCACCCGGTGCATACCTTTCGAGAGCCAGGGA
TTGAGCTGAGTCCTTCAGAGAGAACGAGGAACAACATTCTTCCGTTGTCG
TTGCTTTTCGGGGGGTCACCATCTTTTGTCATTCTTCGTCCGGGACCGGA
ATCATCGCCATTTTCTTCGCGGTGTGTGATGGTGCGCTTCTATCACTCAC
CTCTTGTCTTGCGTGAGACTTGCTGCTGGGCTCGAGCGCAAAACGAGACT
TAGCACGTATGCGGGATTGCTCTGTGACTTTGGTCGGCACCGGACACCGT
CTGCCTCCCCCCCCCCTGCGTCAGATCTACCGTTCGTTGCACTGTTCTCT
TGGGCGTCTAGCGTAGACTGCCACCCGCTCCCATCACACCTTGTGCGTAT
CAATTTTTCCCTTACTGACACAATTGCACGTGCACAATTGCCCGTCTTGC
CATGCGTGTCTCTCCCCCGGCGGCTGTCCACAACAATCTTGCGACCTCCT
CGCGATATCCATTCCAGAAAAACAACGCCCGAAATGGTGAAATGGAGCTT
GTCAAAGTCGCGGGCCAAGTGCTTGCTGGCATGGTGGAGGCGATGCTCGG
CCCTGGAGCGAAGCCCCGCGCGCGGGGCCTGCATCCTACTGAGCTCGCCC
AGCTATCCAGGATGGCGGATTCCTGGAAGGAACGCGGCGCTCTACCCCCG
CCGTCGTTTGAGAGCGTCGAGGAGCGGCTCTCGGCGCTCCGGTCCAGCGA
CGCCGCTGAGAACGGTAGTGGCACCGCGAGAAGCAGCAAGGTCTGGACAA
AGAACCAAACGAAGCGAGCAGCGTGGGTTCAGATGCCGACCGCCCCGGCC
GCCGCTGTCTGGAGCGCAGATGGCGCCCCCGGCGGCCTGTCGCCGCCGCG
GCCTCGGTCCTCCGGCGCCGACGCCGTCACCGGCAGCCGTCTCCCGGCAG
CAGCTCCGCGGACGGACGAAGAATACGCCGCCAGCGTGGAGGCCGCTCTC
AAAGAGCTGTTGGCCCCCGACATTGTGATGGTCGGCGGTTGGTGGGCGCA
GGCGTTTCAGGGGAGCGGACCATTCCCGCAGGGCCCGGAGGGCTGCTGGT
CTCTGCAGTTTCAGAGGGCCAACGAGGACCCTGGGGTCCGCCAGTTGCAA
GCCATGGGGTCGCTCGATGTTAACGGGGACCACCGCGGAGACTTCGCGGG
CGGTGGCCTCGATCGAAGGGGCGTGAAGACGGAGGGAGTCGACGGGAAAG
ACAGCGACGGGACTCCGTCCACGCCGTCCACGGTGCCGAGCGAGGCGTCT
CCGTCGCCGGAACGGGCGTCCCCGCCGCAAGAGGTCAAACTTGAAGCCGG
CAAGGATTTGGATGCGAAGCCGCTGGCCGCCGGGGGAGATTCGAACGGGA
CCGCAGCGGTGGCGGCGGTATCAACGCCGGAGGCGGGGGTTGCACAAGCA
TCAAACAAAGAGAAAGCTTCAGCCTCGAAGGACGAGGGGGAGGGGGAGAA
AGGATCAAGCTCCCCGATTGAGCCCGTCCTCTCCAAGCGCGAGCGGGAAG
AGCAGGAGAGGCGACGCCGGAAGGAGGAGGCCCGCCGCGCCGGTAAGGAG
ATGGGTAAGGCGAAGGCGCTAGAGAGGGAGCGGCAGAAGAAAGAGAGAGA
GCTGCAGCGTCAAGAGATGATCGCCGAGGCGAGAAAAAAGAAGGCGGAAT
ACGAGGCCGCGAAGCGGGAGAAGGAGGCGAAGGAGCAGACCGATGAGCTG
GCTCGCCGCTCCAAAGCGGCGGAGCACGAGCACGAGCACGAGCACCAAGA
GCCCTCCACCACACGAGAGCGCGAGAAGTATCGGAGACGAGACAAGCCGG
CAGGCAAGAGCACAGACGAGCCTAAGCGTGACGCAGGGGCGGAGCACAGC
CGCCACGACCACCGCGACGGCGGCAACAAAGCGAGCGAAGGGCAACACCG
CATGAGGGACAGGGAGAGGCGCAACAGGGCCGCCGGGGGGGGCAACTGGG
AAGCTTCCGCCGCAGACGCGGAGCGGGCGTTTGGCGGTCAGGAGAGAGAC
GACAGTCGCCGCCGCGGGGCTTCCGCGGACAACCGAGGGAGGTTGGCAAA
GGAGGACCGGGAGAGGGGCAAAGGCACGGATCACGCCGCGGTCAGCAGGC
GCGACAGGGACGAGGGCCGACCGCACCACGACCTGGGCGACAGCCGTGAC
ACTGGGTGGGAAATTAGAGGCAGGGGGCATCAAGACTCCCACGAGCAGCC
GCCGCGTGGCGACGACAGAGGGACAGGGGATGACGCGCGAAGGCGAGGAT
CGTCATCGCAGCCGACGAGGGAGGCAAGACTCAGCGTCGACGGTGGAAGG
CCGGGGCTTGATAGCAGGGAACGCGAAGTCGCGGGCGACAAGGGCGAGCG
CAAGAGGAGAAGGGGCGACCTTAGCGAGTCGGAAGGGGTCGGGGCCAGCA
TCAGGCGCGGCGGCGACAGCAGGCACCACGACGAGCGCGGCGGCGAGGAC
GAGCGCAGCAGCAGCCACCGGCCGAGCAAGAAGAAGAGTAAGAAGGACAA
GAGGGATCGGAAGGACAAGAGGGGAACCGGCACTTGGACGTCGCCTCCGC
GCGGCCCTCGAGGACGGGCAGCGAGGAGTCGTCATCCCGCGCTGGCTCTC
GCAAGCGCTCGCGGGACTTCGACAGGGCCCAGCCGCCGGTAGGCTACGCG
GCCGCCGCGCTGCACAGTAGCAGCGACCTCATTCGCCGCAGCCAAGAACC
CCACAGGCAGCGGTCGGAGGCTCGGTTCGGCGGCAGCGGCGGTGGCGAGG
TCCGGGACGGCCCTCGTCACGCCATGGGTCGCTCCAGGATAGACTCCGAT
TCGTCGCCGAGGCGAGGCGACCGGCGGGATGGATCGGAGAAGCGCGCTAG
GCGTAGCGGCAGTGCCGGCGAGAGCGCCCACGGACGAACCGGCGCCAGCA
GCAGAGAACGACACGCTCGTGGGGGCGGGGCCGGGCGCGAGTCGGCGGCA
GCGGGCGCCTCCTTGTCCTCAGACAGTAGCGCCGGCGGTGTTGCCCTTGG
CGCCGGCGGCCCCAGTGGCGGACTTCCCGGCATGGAGGAGTACAGCTCGG
CGGCCTCACCGCCCACAGGCTTGGAGCTTGGCGGCTTCGGGAAGGCAGCC
GGCGGCCACGGGCTGGGGAGCTTGAAGATGGTGGACGTGTACGGGCCGAC
CACGACCACCGGCAGTGGCGACTCCCCCGACGGGGGCGGCAGTAGTCGAA
GAAGGCGGGGAGATGGCGGGAAGGACGGCGGCGGCGGCAGCGGCGGCCGC
TCGCGATCGGCGACCGCGGACGCGTACCGGCAGGGCGTGGATGACTCGAG
CCAGGCCGGGGGCAGGTCCGACAGGGAGCGCTCCGAAAGAGATCGCGCGG
AAAGAGATCGCTCGGAGCGGGACTACGCTCGTGCTGCGGACAAGAGCGCC
AGGGAGTCGTCGGGACGGCGCAGGGATGTCGGTTCGCGCCCATCGAGTTC
GTCCCACGTGAGGACATGGAATTCTATGTTTTCTCTCATGGCAAGACATT
GATGCGTCCAGGCAACTAGCTGAGTTAGGGGTGCTAGCGGGGCTTGAGAA
ATAGGGTATGACACGGAACGTTGCTAGGAACTTGTCAGCAAGGAGGGCAA
GCCGTCTATCTCGCCGAATCGACTGCAGCGCAAGCAAAGTCACGGCCTTC
GCACCCTGCGCGTTTTCACCGTGAACAAGCAGCACACGAAGGTGTGTCCT
CAAGTGCCTCCGTAACTCCGCCCTCCCATCGATGAGACGCGCAGTCTGCC
ACAATATCTCTGCTGGTGTGAAGCACTCGTCCCGTACAACTGAGGCCTTC
ACTCCCTCCCTTTGCGGATGCTCCTTATTAAATATTTTTTAATGTTGTCA
GGTTCACGGAAGCCGCAGATCGCCGGAAAGAGGGATGCAGTCCTCGTCTG
CACGGGACGGGTCCTTTCGCCGGCGCCCCGGGTCCCCGCCGAGAGATGAC
TCTCGCGGGCGCCCGTCCGACTCTCGCGACAGGCGGCACTCGAAGAGCGG
CGTGGGCGCCGGCACCGGCGGCCGCTTGACGTCAGCGGCGCACAGCGGCA
TGGGGATGGGCAATCTAGGTGTGAGCATGAGCATGGGCATGGGTGTTTCC
ATGATTGGAGGGACATCGGTCCTTATGCCCGTCGCGAAGATGATGGAGGT
back to topCoding sequence (CDS) from alignment at P-fluviatile_contig18:1215356..1221855- >mRNA_P-fluviatile_contig18.3224.1 ID=mRNA_P-fluviatile_contig18.3224.1|Name=mRNA_P-fluviatile_contig18.3224.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5232bp|location=Sequence derived from alignment at P-fluviatile_contig18:1215356..1221855- (Porterinema fluviatile SAG_2381)
ATGTCGGGCAAGAGGACGCTGTCGCTCTCAGCATACAAGAAAAGCAAGGA
GGCGCTCGCCGCTGCACCATCAGCGAAGGAGCGGCGGCTAGGCTTTGGCG
AATCAGTCAGCACGCGGGAGATGTCGGGCAAGAGGACGCTGTCGCTCTCA
GCATACAAGAAAAGCAAGGAGGCGCTCGCCGCTGCACCATCAGCGAAGGA
GCGGCGGCTAGGCTTTGGCGAATCAGTCAGCACGCGGGAGGCTCGTGCAC
AGCAGCTCCAGGTGGAGACCCAAGTCATCGGGCGTCTCGATGAGCTGCTG
AAGCAATGTGGCAAGGAACCGAGCTCCTCCCAGGCGATCAGTAACTGGCT
CTGCGCGGAGGGGGTTGAAGGACATGCTAAGAAGGGCCTGTCTAGGATTC
TCTGGCTCGTGCACAGCAGCTCCAGGTGGAGACCCAAGTCATCGGGCGTC
TCGATGAGCTGCTGAAGCAATGTGGCAAGGAACCGAGCTCCTCCCAGGCG
ATCAGTAACTGGCTCTGCGCGGAGGGGGTTGAAGGACATGCTAAGAAGGG
CCTGTCTAGGATTCTCTGCTACGTGAAGGTCTGGTCCCGGGTTCTCCGGT
CGGAAGGCGTGGCGCCGAAGACAAAGGCGGAGATTGACGTGGCGGAGGTT
CGCGCAAGGGCAGCGTTCGGCGCCTGTGTGTCCGCGATCAATGCTGTGGA
CAGTTTATCCTACAGATTGTCGGAGCTACGTGAAGGTCTGGTCCCGGGTT
CTCCGGTCGGAAGGCGTGGCGCCGAAGACAAAGGCGGAGATTGACGTGGC
GGAGGTTCGCGCAAGGGCAGCGTTCGGCGCCTGTGTGTCCGCGATCAATG
CTGTGGACAGTTTATCCTACAGATTGTCGGAGAAAAACAACGCCCGAAAT
GGTGAAATGGAGCTTGTCAAAGTCGCGGGCCAAGTGCTTGCTGGCATGGT
GGAGGCGATGCTCGGCCCTGGAGCGAAGCCCCGCGCGCGGGGCCTGCATC
CTACTGAGCTCGCCCAGCTATCCAGGATGGCGGATTCCTGGAAGGAACGC
GGCGCTCTACCCCCGCCGTCGTTTGAGAGCGTCGAGGAGCGGCTCTCGGC
GCTCCGGTCCAGCGACGCCGCTGAGAACGGTAGTGGCACCGCGAGAAGCA
GCAAGGTCTGGACAAAGAACCAAACGAAGCGAGCAGCGTGGGTTCAGATG
CCGACCGCCCCGGCCGCCGCTGTCTGGAGCGCAGATGGCGCCCCCGGCGG
CCTGTCGCCGCCGCGGCCTCGGTCCTCCGGCGCCGACGCCGTCACCGGCA
GCCGTCTCCCGGCAGCAGCTCCGCGGACGGACGAAGAATACGCCGCCAGC
GTGGAGGCCGCTCTCAAAGAGCTGTTGGCCCCCGACATTGTGATGGTCGG
CGGTTGGTGGGCGCAGGCGTTTCAGGGGAGCGGACCATTCCCGCAGGGCC
CGGAGGGCTGCTGGTCTCTGCAGTTTCAGAGGGCCAACGAGGACCCTGGG
GTCCGCCAGTTGCAAGCCATGGGGTCGCTCGATGTTAACGGGGACCACCG
CGGAGACTTCGCGGGCGGTGGCCTCGATCGAAGGGGCGTGAAGACGGAGG
GAGTCGACGGGAAAGACAGCGACGGGACTCCGTCCACGCCGTCCACGGTG
CCGAGCGAGGCGTCTCCGTCGCCGGAACGGGCGTCCCCGCCGCAAGAGGT
CAAACTTGAAGCCGGCAAGGATTTGGATGCGAAGCCGCTGGCCGCCGGGG
GAGATTCGAACGGGACCGCAGCGGTGGCGGCGGTATCAACGCCGGAGGCG
GGGGTTGCACAAGCATCAAACAAAGAGAAAGCTTCAGCCTCGAAGGACGA
GGGGGAGGGGGAGAAAGGATCAAGCTCCCCGATTGAGCCCGTCCTCTCCA
AGCGCGAGCGGGAAGAGCAGGAGAGGCGACGCCGGAAGGAGGAGGCCCGC
CGCGCCGGTAAGGAGATGGGTAAGGCGAAGGCGCTAGAGAGGGAGCGGCA
GAAGAAAGAGAGAGAGCTGCAGCGTCAAGAGATGATCGCCGAGGCGAGAA
AAAAGAAGGCGGAATACGAGGCCGCGAAGCGGGAGAAGGAGGCGAAGGAG
CAGACCGATGAGCTGGCTCGCCGCTCCAAAGCGGCGGAGCACGAGCACGA
GCACGAGCACCAAGAGCCCTCCACCACACGAGAGCGCGAGAAGTATCGGA
GACGAGACAAGCCGGCAGGCAAGAGCACAGACGAGCCTAAGCGTGACGCA
GGGGCGGAGCACAGCCGCCACGACCACCGCGACGGCGGCAACAAAGCGAG
CGAAGGGCAACACCGCATGAGGGACAGGGAGAGGCGCAACAGGGCCGCCG
GGGGGGGCAACTGGGAAGCTTCCGCCGCAGACGCGGAGCGGGCGTTTGGC
GGTCAGGAGAGAGACGACAGTCGCCGCCGCGGGGCTTCCGCGGACAACCG
AGGGAGGTTGGCAAAGGAGGACCGGGAGAGGGGCAAAGGCACGGATCACG
CCGCGGTCAGCAGGCGCGACAGGGACGAGGGCCGACCGCACCACGACCTG
GGCGACAGCCGTGACACTGGGTGGGAAATTAGAGGCAGGGGGCATCAAGA
CTCCCACGAGCAGCCGCCGCGTGGCGACGACAGAGGGACAGGGGATGACG
CGCGAAGGCGAGGATCGTCATCGCAGCCGACGAGGGAGGCAAGACTCAGC
GTCGACGGTGGAAGGCCGGGGCTTGATAGCAGGGAACGCGAAGTCGCGGG
CGACAAGGGCGAGCGCAAGAGGAGAAGGGGCGACCTTAGCGAGTCGGAAG
GGGTCGGGGCCAGCATCAGGCGCGGCGGCGACAGCAGGCACCACGACGAG
CGCGGCGGCGAGGACGAGCGCAGCAGCAGCCACCGGCCGAGCAAGAAGAA
GAGTAAGAAGGACAAGAGGGATCGGAAGGACAAGAGGGGAACCGGCACTT
GGACGTCGCCTCCGCGCGGCCCTCGAGGACGGGCAGCGAGGAGTCGTCAT
CCCGCGCTGGCTCTCGCAAGCGCTCGCGGGACTTCGACAGGGCCCAGCCG
CCGGTAGAAAAACAACGCCCGAAATGGTGAAATGGAGCTTGTCAAAGTCG
CGGGCCAAGTGCTTGCTGGCATGGTGGAGGCGATGCTCGGCCCTGGAGCG
AAGCCCCGCGCGCGGGGCCTGCATCCTACTGAGCTCGCCCAGCTATCCAG
GATGGCGGATTCCTGGAAGGAACGCGGCGCTCTACCCCCGCCGTCGTTTG
AGAGCGTCGAGGAGCGGCTCTCGGCGCTCCGGTCCAGCGACGCCGCTGAG
AACGGTAGTGGCACCGCGAGAAGCAGCAAGGTCTGGACAAAGAACCAAAC
GAAGCGAGCAGCGTGGGTTCAGATGCCGACCGCCCCGGCCGCCGCTGTCT
GGAGCGCAGATGGCGCCCCCGGCGGCCTGTCGCCGCCGCGGCCTCGGTCC
TCCGGCGCCGACGCCGTCACCGGCAGCCGTCTCCCGGCAGCAGCTCCGCG
GACGGACGAAGAATACGCCGCCAGCGTGGAGGCCGCTCTCAAAGAGCTGT
TGGCCCCCGACATTGTGATGGTCGGCGGTTGGTGGGCGCAGGCGTTTCAG
GGGAGCGGACCATTCCCGCAGGGCCCGGAGGGCTGCTGGTCTCTGCAGTT
TCAGAGGGCCAACGAGGACCCTGGGGTCCGCCAGTTGCAAGCCATGGGGT
CGCTCGATGTTAACGGGGACCACCGCGGAGACTTCGCGGGCGGTGGCCTC
GATCGAAGGGGCGTGAAGACGGAGGGAGTCGACGGGAAAGACAGCGACGG
GACTCCGTCCACGCCGTCCACGGTGCCGAGCGAGGCGTCTCCGTCGCCGG
AACGGGCGTCCCCGCCGCAAGAGGTCAAACTTGAAGCCGGCAAGGATTTG
GATGCGAAGCCGCTGGCCGCCGGGGGAGATTCGAACGGGACCGCAGCGGT
GGCGGCGGTATCAACGCCGGAGGCGGGGGTTGCACAAGCATCAAACAAAG
AGAAAGCTTCAGCCTCGAAGGACGAGGGGGAGGGGGAGAAAGGATCAAGC
TCCCCGATTGAGCCCGTCCTCTCCAAGCGCGAGCGGGAAGAGCAGGAGAG
GCGACGCCGGAAGGAGGAGGCCCGCCGCGCCGGTAAGGAGATGGGTAAGG
CGAAGGCGCTAGAGAGGGAGCGGCAGAAGAAAGAGAGAGAGCTGCAGCGT
CAAGAGATGATCGCCGAGGCGAGAAAAAAGAAGGCGGAATACGAGGCCGC
GAAGCGGGAGAAGGAGGCGAAGGAGCAGACCGATGAGCTGGCTCGCCGCT
CCAAAGCGGCGGAGCACGAGCACGAGCACGAGCACCAAGAGCCCTCCACC
ACACGAGAGCGCGAGAAGTATCGGAGACGAGACAAGCCGGCAGGCAAGAG
CACAGACGAGCCTAAGCGTGACGCAGGGGCGGAGCACAGCCGCCACGACC
ACCGCGACGGCGGCAACAAAGCGAGCGAAGGGCAACACCGCATGAGGGAC
AGGGAGAGGCGCAACAGGGCCGCCGGGGGGGGCAACTGGGAAGCTTCCGC
CGCAGACGCGGAGCGGGCGTTTGGCGGTCAGGAGAGAGACGACAGTCGCC
GCCGCGGGGCTTCCGCGGACAACCGAGGGAGGTTGGCAAAGGAGGACCGG
GAGAGGGGCAAAGGCACGGATCACGCCGCGGTCAGCAGGCGCGACAGGGA
CGAGGGCCGACCGCACCACGACCTGGGCGACAGCCGTGACACTGGGTGGG
AAATTAGAGGCAGGGGGCATCAAGACTCCCACGAGCAGCCGCCGCGTGGC
GACGACAGAGGGACAGGGGATGACGCGCGAAGGCGAGGATCGTCATCGCA
GCCGACGAGGGAGGCAAGACTCAGCGTCGACGGTGGAAGGCCGGGGCTTG
ATAGCAGGGAACGCGAAGTCGCGGGCGACAAGGGCGAGCGCAAGAGGAGA
AGGGGCGACCTTAGCGAGTCGGAAGGGGTCGGGGCCAGCATCAGGCGCGG
CGGCGACAGCAGGCACCACGACGAGCGCGGCGGCGAGGACGAGCGCAGCA
GCAGCCACCGGCCGAGCAAGAAGAAGAGTAAGAAGGACAAGAGGGATCGG
AAGGACAAGAGGGGAACCGGCACTTGGACGTCGCCTCCGCGCGGCCCTCG
AGGACGGGCAGCGAGGAGTCGTCATCCCGCGCTGGCTCTCGCAAGCGCTC
GCGGGACTTCGACAGGGCCCAGCCGCCGGTAG back to top
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