mRNA_P-fluviatile_contig1.226.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.226.1 vs. uniprot
Match: A0A6H5J5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5B3_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 1.200e-150 Identity = 503/1290 (38.99%), Postives = 633/1290 (49.07%), Query Frame = 1
Query: 256 PSPRLPPAKTSIMQDGDTLPLGLKTRGTRDASHQLIREKEGRSLNTCGDGVRGSSEPSAVLTAYNDSGTADDRDNFGPIGGCMAPVGPEGPLEGDSSIGWDSATAVGASGSLAES---RILPVRSAPTSWRPQAASSARNVLSRGGSRSARRLHSGKERDSLHLHSRKPKAIDTILPEAGAXXXXXXXXXXXXXXXXXXQAKGDGADGRASSITESTACESQRENPAGKGGELRVGFSVVPQRVYPPIADTCSGIILRLTPAERSLEPWDTSFAPLRAMCDIEPSISRAGIEYRGVIHAVDVAREMKSHHKYKQRKARDAKALLGEDVRPRTSEPPLRIVGVTTELDVFIVTLRRLIRRLRRHCSKLQESLRREVKFRRRHGKPPPELLASVAQSVRKTLHTDQQELRVVLAHLRAISLDTVKAVSEWRATFATPERSGHRQLFRNGSAPSLHNQLPLPRHQPVDARGLDQLSNISAEQDEMDHLHQQDDRSDGGSLNCQSERRVTDDPE-PRYSEDGKTFFI------------RRGGHEG---------VRSALALGKPTTATSTPADDRSRRNDGCSAAIFLWKGSNYLIKMAHDLEFLDD---SAPVSAWLGFSACGNPFLVPPDGHDVCDELRRGHEERRNGAAARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGGGADGRRGSSFG-------DLFAPVSRRPSAQGREXXXXXXXXFGGAGGGDAGRGLLRQDGHHPPARVVADSNSNEHSRSQKAGP------TMREGSPAATGLSGGDEEGRRTFVTQGGKAARAGTNLASASV-SASASADPPILWGVGDLGGGGDEDDIPYELSSGEEEEVRWSGGGQLLAPIVPELPSAIRSKASAAGAVLRGEHSSERAWKSDAREMLANTRWTQEILDQPSREHSSRVELLAERSLREGLRGALMDRHVGTTRLQSVAAAXXXXXA--EGLPWWGHG----PLTGRASTAPATGGGGARQRSAGSGAAGGSPTVANDWAISAQRGRYRVSAAFG------GNSRGGVRVAVEGDASNATADDRIQSAGVPSQRSPSVAPSRRPATLSKDSTASG-----GHTSSSPRPRHHDLKTP----------GAANEAAGTGSTSLTSLAG-GRSAAXXXXXXXXXXXXXXXXXXXXVAARPTATRRPFCRRNGGRIVIVTDPGSSPEIRRRAATLIQAALLAVRARSFVHRLRRNREQAALVIGRSWRRSRARIGLRRAARLRXXXXXXRAAEGRSKNRAAVLIQMFFRDVKYRRIR 3915
P + P + S+++D D RG AS + + R GD + S PS V+ S T R F +GP L+ SS+G S + SGS A + RI PVRSAP WRP+AA +A K XXXXXXXXXXXXXXXX A+GD GR I+ A E+ AG G SV VYP I D + LRL PAERSLEPW T+ AP+RAMCDI+PS+SRAGI YR VIHAV+ A++MK+ HK A +G+ PR IVTL+RLIRRLRR C KLQE LR E KFR +GKPPPE+ S RKTL ++QQELRVVLAHLRAIS DTVKAV EWR TF + G+R++ + SAP L N G+ + AE E DH G + C+ ++ ++S+ G +FI RRG +G +R + T + + P + ND A +FLWKG+NYL KMAHDLEFLDD SAPVSAWLGFS NPFL+PP+G +VC++LRR EERR AA R XXXX XXXXXXXXXXXXXXX D+ AP+ RR S Q R+ G+ L Q PP AD+++N+ R +K+G T FVT+G + T A S+ SAS S + P+ LG DE+ IPY+LS+ EEEE++W+GGG+L PIVPEL ++RSKA AA VLR E +SE+A S AR +L+N R T+EIL P R+ S R+E LAERS+RE LRGAL+DRHVG TRL+ + + A W P STAPA GGG SG A A A +A+ G R SAAFG G+SRGGVRV+V+G + D I AG S PSR ++ +D + G + P R L++ G NE GT T+ S A G + + RPTA RRPFCR NGG VI+ DPG S ++RRRAA IQ+ALLA+ AR +V LR +R++A +I + +R A RLR R AE RS+NRA +IQ FFRDV+YRR R
Sbjct: 2 PRDKTPCSDRSLVRDRD--------RGADGASGTVTDRNDPRP----GDNLTSSHLPSGVIEGGGGSNT---RVKFS--------IGPTVSLDDGSSLGPSSTSLCETSGSFAVASSLRIPPVRSAPVPWRPRAAINA------------------KSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAEGDALAGRW--ISPRDAGENGDLCTAGSAGNAHKPPSVQSSVVYPRIPDAHGWVSLRLNPAERSLEPWGTALAPMRAMCDIDPSLSRAGIVYRNVIHAVEGAQKMKTCHK----------AKVGQQW-PR-----------------LIVTLKRLIRRLRRRCGKLQELLRWEAKFRWHYGKPPPEVGVCTTSSTRKTLLSEQQELRVVLAHLRAISFDTVKAVCEWRTTFLGSGKPGYRRMHPSESAPGLPN-------------GMTRFPEPLAEFQEHDH---------GIGVVCREDQEGHHQGNRQKHSQRGHPWFIDASQEGHQAGLKRRGSEDGSVHHHDPHDLRDEVDDNALTRSIAVPRPFGGK-NDSGPAPLFLWKGNNYLTKMAHDLEFLDDADASAPVSAWLGFSVRDNPFLIPPNGLNVCEDLRRQREERREEAAVPRRXXXXHKRSPGTGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSAPLPRRQSKQERKQGRDPDSDIKGSDARPEPMVLTPQQQSAPP---TADADANDEGRKRKSGSATENVVTTSXXXXXXXXXXXXXXXXXGIFVTEGVARSAFSTAAAEGSLRSASTSVESPLF--PAGLGYSNDENTIPYQLSTDEEEELQWAGGGRLDQPIVPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTEEILHTPERDCSFRMESLAERSVREELRGALVDRHVGATRLKLLPSLLKSSCAMMRMSSCWREEKERPPFVRSVSTAPARGGGRPGLTVVCSGTA-----AARGRAGAARLGHGRASAAFGSRGGGGGSSRGGVRVSVDGH--HEATDGAIAGAGKRSSD-----PSRCTQSVPRDGNITNNRIEKGKRAPLPSSRSQCLESGTGSQTHTTRLGGTNE--GTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKALTVRPTARRRPFCR-NGGCRVIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRAVRLIWXXXXXXXTKADMRTARRLRRAEGLRRVAEERSRNRATHVIQTFFRDVRYRRER 1177
BLAST of mRNA_P-fluviatile_contig1.226.1 vs. uniprot
Match: D8LE39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE39_ECTSI) HSP 1 Score: 455 bits (1170), Expect = 4.090e-135 Identity = 424/1060 (40.00%), Postives = 540/1060 (50.94%), Query Frame = 1
Query: 1126 RGVIHAVDVAREMKSHHKYKQRKARDAKALLGEDVRPRTSEPPLRIVGVTTELDVFIVTLRRLIRRLRRHCSKLQESLRREVKFRRRHGKPPPELLASVAQSVRKTLHTDQQELRVVLAHLRAISLDTVKAVSEWRATFATPERSGHRQLFRNGSAPSLHNQLPLPRHQPVDARGLDQLSNISAEQDEMDHLHQQDDRSDGGSLNCQSERRVTDDPEPRYSEDGKTFFIRRGG-------HE--GVRSALALGKPTTATSTPADDRSRRNDGCSAAIFLWKGSNYLIKMAHDLEFLDD---SAPVSAWLGFSACGNPFLVPPDGHDVCDELRRGHE---------------ERRNGAAARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGGGADGRRGSSFGDLFAPVSRRPSAQGREXXXXXXXXFGGAGGGDAGRGLLRQDGHHPPARVVADSNSNEHSRSQKA----------GPTMREGSPAATGLSGGDEEGRRTFVTQG------GKAARAGTNLASASVSASASADPPILWGVGDLGGGGDEDDIPYELSSGEEEEVRWSGGGQLLAPIVPELPSAIRSKASAAGAVLRGEHSSERAWKSDAREMLANTRWTQEILDQPSREHSSRVELLAERSLREGLRGALMDRHVGTTRLQ-----------SVAAAXXXXXAEGLPWWGHGPLTGRASTAPATGGGGARQRSAGSGAAGGSPTVANDWAISAQRGRYRVSAAFG------GNSRGGVRVAVEGDASNATADDRIQSAGVPSQRSPSVAPSRRPATLSKDSTASGGHTSSSPRPRHHDLKTPGAANEA--AGTGS-TSLTSLAG----------------GRSAAXXXXXXXXXXXXXXXXXXXXVAARPTATRRPFCRRNGGRIVIVTDPGSSPEIRRRAATLIQAALLAVRARSFVHRLRRNREQAALVIGRSWRRSRARIGLRRAARLRXXXXXXRAAEGRSKNRAAVLIQMFFRDVKYRRIRDLQTLSRESQNRHATEQRLKQDALLVVQTTIRGFIATSRVKRLRHKRRCEA 4068
R VIHAV+ A++MK+ HK K RK RDA++LLG+DVRPRTSEP IVTL+RLIRRLRR C KLQE LR E KFR +GK PPE+ +S RKTL ++QQELRVVLAHLRA+S DTVKAVSEWR TF + G+R++ + SA N + P + + D I DE HL R + Q E D P + G RR HE VR T + + P + ND A +FLWKG NYL K+AHDLEFLDD SAPVSAWLGFS NPFL+PP+G +VC++LRR E +R+G XXXXXXXXXXXXXXXXXXXXXX +GR+ L Q PP +AD+++N+ R +K+ P + G+ GG FVT+G AA A +L SAS S + PP LG DE+ IP++LS+ EEEE++W+GGG+L PIVP+L ++RSKA AA VLR E +SE+A S AR +L+N R T+ IL P ++ S R+E LAERS+REGLRGAL+DRHVG TRL+ + E P P STAPA GGG SGAA A A +A+ G R AAFG G+SRGGVRV+V+G D I AG S PSR ++ +D G+ +++ + P + ++ +GTGS TS T L G G + +A RPTA RRPFCR GGR VI+ DPG SP++RRRAA IQAALLA+ AR +V LR +R++A +I R+WRR RA+ +R A RLR R AE RS+NRAA ++Q FFRDVKYRR RD +S Q ++ A + VQ +R IA+ RV+ +RH RR +A
Sbjct: 8 RDVIHAVEGAQKMKTCHKAKIRKERDARSLLGQDVRPRTSEP-----------RSLIVTLKRLIRRLRRRCGKLQELLRWEAKFRWHYGKSPPEVAVCSTRSTRKTLLSEQQELRVVLAHLRAMSFDTVKAVSEWRTTFLGSGKPGYRRMHPSESALVRSNGMTRFLESPAEFQEHDHDIGIVYRGDEEGHLQGNKQR------HSQREHPGLIDASPEGQQAG---LKRRSSAAESMHHHEPHDVRDEDDDNALTRSITVPRPFVGK-NDSNPAPVFLWKGHNYLTKLAHDLEFLDDADESAPVSAWLGFSVRDNPFLIPPNGLNVCEDLRRQREXXXXXXXXXXXXXXXHQRSGGTGN-GQRRLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIKGRDARPKPMV-------------LTPQQQSAPP---MADADANDEGRQRKSESATENVVTTSPLLLVTDDQRDGVDGGGG----IFVTEGVARSAFSTAAAAEGSLRSASTSVESPLFPP------GLGYSDDENTIPHQLSTDEEEELQWAGGGRLDLPIVPKLHESVRSKALAAAQVLRSEAASEQALTSSARAILSNARRTEGILHTPEKDCSFRMESLAERSVREGLRGALVDRHVGATRLKWSPSLLKSSSCVMMGMSPCCREEERP-----PFVRSVSTAPARGGGRPGLAVICSGAA-----AARGRAGAARLGHRRALAAFGSRGGGGGSSRGGVRVSVDGH--REATDGAIAGAGKGSSD-----PSRCTQSVPRD-----GNNTNNRNEKGKRAPLPSSRSQCLESGTGSETSTTRLGGTNEGTADTTAVSAAPPGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPFCRNGGGR-VIIPDPGVSPDVRRRAAARIQAALLALCARRYVRGLRDDRDRAVRLIWRNWRRCRAKADMRTARRLRRAEGLRRVAEERSRNRAAHVVQTFFRDVKYRRERDRHEMSLRGDPGALASQLREETAAIAVQVHVRRLIASKRVRGVRHTRRAQA 996 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.226.1 >prot_P-fluviatile_contig1.226.1 ID=prot_P-fluviatile_contig1.226.1|Name=mRNA_P-fluviatile_contig1.226.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1469bp GDSSSFGPGTLSRRHRQTKGLRALRARLFAAAARNSTDGTSQSRRSSYGNback to top mRNA from alignment at P-fluviatile_contig1:2833775..2841512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.226.1 ID=mRNA_P-fluviatile_contig1.226.1|Name=mRNA_P-fluviatile_contig1.226.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7738bp|location=Sequence derived from alignment at P-fluviatile_contig1:2833775..2841512- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2833775..2841512- >mRNA_P-fluviatile_contig1.226.1 ID=mRNA_P-fluviatile_contig1.226.1|Name=mRNA_P-fluviatile_contig1.226.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8814bp|location=Sequence derived from alignment at P-fluviatile_contig1:2833775..2841512- (Porterinema fluviatile SAG_2381)back to top |