mRNA_P-fluviatile_contig17.2923.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-fluviatile_contig17.2923.1
Unique Name	mRNA_P-fluviatile_contig17.2923.1
Type	mRNA
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)

Homology

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: D8LIC4_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC4_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 5.780e-111
Identity = 204/468 (43.59%), Postives = 263/468 (56.20%), Query Frame = 1

Query:    1 ILYVYEPCRGQGDGVLGTYEILRRAECFALARRLSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDS--RRHLAGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCGPEHDRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVRGMGVDDSVTNDEDRRPDXXXXXXXVGNFWQSNSIVLSGAVVI---ERKSEEREPGRGVSD-----------ESGVAVVDRGGEDGDAAVLSRRITRRKAL-----------GVGGGRCDNQNLAEEQPYNTKRESSLMADLWRRQMPAQDARAVWDACHDTRVMEELMYS 1323
            ++YVYEPCR  G GVLG Y++L R ECFALARRL RCEF + DSDRLG D FAA FSS  V++VH S+KA +  G    +E  L +AH+ L + CK SRAVA+KTIRL DGV D A+YDTSG+++L LVRDPRAVVRSQ+R +GL  F   +P + +L+G+ DW+ RQ E+RRAVG+Y+C NYR QLDS  ++HL  DG+Y ++RYEDF  LP VV +LVYCWAGLG +P ++ TWID++TK+ NC   H  R                                            R +G  D++     R+P         G    S  +  S   V     + +  REP R                +G   V  G  +G   V   R   RKAL           G GG   + +  +++ PY+T R SS M DLWR+QMP  DA+AVWDAC  +RVMEEL YS
Sbjct:   12 VVYVYEPCRASGKGVLGNYQMLLRTECFALARRLVRCEFDVNDSDRLGTDGFAAGFSSPVVADVHKSVKAGKGSGGGYRAE-LLHRAHQALMDACKESRAVAIKTIRLLDGVGDAAKYDTSGVNILQLVRDPRAVVRSQLRHWGLDRFSEALPNVRELKGMTDWRARQTESRRAVGQYLCSNYRMQLDSPKQQHL-DDGKYLQLRYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKMSNCDAAHGPRTRRRMATSLVATAASHEGCGGSMAVLVSGCEQGEQHH-------REIGHTDAL-----RKPGNLRKRSSPGGASFSVPVGESAGPVPASHRQSNSSREPARDTEPFDLQGYATLVPANGATAVSTGTTNGSPPV---RPNARKALEAAAGTAGADKGTGGDCVNQKRYSDQHPYDTTRHSSAMVDLWRQQMPQADAQAVWDACQASRVMEELGYS 462

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: A0A6H5JR69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR69_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 3.230e-43
Identity = 110/247 (44.53%), Postives = 140/247 (56.68%), Query Frame = 1

Query:    4 LYVYEPCRGQGDGVLGTYEILRRA---ECFALARRLSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGS-EDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENC 732
            LY YEPCR +G GVLG           ECFAL RRL RCEFTL+D+D +  D  AA  SS AV       +A+R  G+     ++AL  AHE + E CK+SRAV VK+IRLYDG++    YDTSG+H+L LVRDPR VV SQ+   GL    ++I G     G  D     R T + +G                     +Y R+RYEDF  LP+VV +LVYC  GLGEVP ++  WI+ NT++  C
Sbjct:  123 LYFYEPCRQRGHGVLGGLHQTSSVGGPECFALVRRLLRCEFTLQDTDGISADRAAAEASSPAV---EEPTRATRDGGTEVAKRQEALHVAHETIMEACKSSRAVVVKSIRLYDGLNG-QDYDTSGLHVLLLVRDPRGVVNSQM---GLWNNPSKIGGNG---GDVDPAHVARNTAQTLGAV-------------------KYLRLRYEDFTTLPKVVAELVYCRFGLGEVPATVMGWINYNTRMPAC 340

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: D7FWT3_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT3_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.170e-43
Identity = 104/248 (41.94%), Postives = 136/248 (54.84%), Query Frame = 1

Query:    1 ILYVYEPCRGQGDGVLGTYEILRRA---ECFALARRLSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAGDG-RYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENC 732
            +LY YEPCR +G GVLG           ECFAL RRL RCEFTL+D+D +  D  AA  SS  V                               E+   + AV VK+IRL+DG+D    YDTSG+H+L LVRDPR VV SQ+  +   P +    G     G  D     R++ R +G  +C++YRKQLDS + L  +  +Y R+RYEDF  LP+VV +LVYC  GLGEVP ++  WI+ NT++  C
Sbjct:   94 LLYFYEPCRQRGQGVLGGLHETSSVGGPECFALIRRLLRCEFTLQDTDGISADRAAAEASSPVV-------------------------------EEPTRATAVVVKSIRLHDGLDG-PEYDTSGLHVLQLVRDPRGVVNSQMGLWN-NPSKTGGNG-----GDVDPAQAARKSGRTLGAVVCKSYRKQLDSFQQLGPESSKYLRLRYEDFTTLPKVVAELVYCRFGLGEVPATVTGWINYNTRMPAC 303

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: A0A6H5KSJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSJ9_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.410e-35
Identity = 71/130 (54.62%), Postives = 92/130 (70.77%), Query Frame = 1

Query:  100 LSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIAD 489
            L RCEF ++DS RLG D FAA FSS  V++VH S+KA +  G   G+E  L +AH+ L + CK SRAVAVK IRL DGV D ++YDTSG+++L LVRDPRAVVRSQ+R +G   F   +P + KL+ + D
Sbjct:   29 LVRCEFDVKDSHRLGTDGFAAGFSSPVVADVHKSVKADKGSGGGYGAE-LLHRAHQALMDACKESRAVAVKAIRLLDGVGDASKYDTSGVNILQLVRDPRAVVRSQLRLWGFNRFSEALPNVRKLKSMTD 157

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: A0A6G6CDI6_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDI6_SACJA)

HSP 1 Score: 140 bits (353), Expect = 3.010e-34
Identity = 87/219 (39.73%), Postives = 123/219 (56.16%), Query Frame = 1

Query:   76 ECFALARRLSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENC 732
            EC AL +RL+RC F+L DS  +  D+ A ++ S  ++ +          G++ G++    QAHE+L E C   RAVAVK+IRL +G+     YD SG+ +LHLVRDPRAVVRSQ               +    G    +   R+T RA G  +C  YR QLD+ + L  + RY  +RYED    P +  +L+Y WAGLG +P +++ WID NTK+  C
Sbjct:    6 ECLALLQRLTRCAFSLTDSAGIASDKNAVSYGSPELNIL----------GAAHGAKQFF-QAHEQLIETCNKRRAVAVKSIRLTEGLGG-KDYDVSGLQVLHLVRDPRAVVRSQQAHL-----------MTSWGGRGRVKADNRKTSRAGGTSVCGTYRVQLDTSKKLE-ESRYLLMRYEDIATTPEIAVELMYYWAGLGPLPANVKEWIDANTKMPAC 200

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: A0A7L4XQX3_SACJA (Carbohydrate sulfotranserase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XQX3_SACJA)

HSP 1 Score: 134 bits (338), Expect = 1.740e-31
Identity = 92/245 (37.55%), Postives = 123/245 (50.20%), Query Frame = 1

Query:    1 ILYVYEPCRG-QGDGVLGTYEILRRAECFALARRLSRCEFTLRDSDRLGVDEFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRAVAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENC 732
            +LY YEPCR   G  + G        EC A  +RL++C F+  DS  +  D  +    S A+ ++   + AS ++           +AHE L + C NS+AV VK+IRL  G+     YD  G+ +LHLVRDPR VVRSQ   FG+                AD  T       A G  IC +YR QLDS + L GD RY R+RYED    P +    +Y W GLG VP S+  W++ NT +  C
Sbjct:   67 VLYFYEPCRKLSGTDIDGL-------ECLAFLQRLTQCTFSAEDSAWIADDANSVKNGSPALKSL---LAASGRK--------EFAEAHERLVDTCINSKAVVVKSIRLGVGLGG-RDYDLGGLKVLHLVRDPRGVVRSQREHFGIS---------WGASNDADSAT----IAHAGGASICGSYRNQLDSSKKL-GDDRYLRVRYEDIATSPELAVAFIYYWCGLGTVPASVSEWVEVNTNMPTC 278

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: A0A6H5KKM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKM2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 6.470e-23
Identity = 89/271 (32.84%), Postives = 117/271 (43.17%), Query Frame = 1

Query:  544 NYRKQLDS--RRHLAGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCGPEHDRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVRGMGVDDSVTNDEDRRPDXXXXXXXVGNFWQSNSIVLSGAVVIERKSEEREP----GRGVS-DESGVAVVDRGGEDGDAAVLSRRITRRKAL----GVGGGRCDNQNLAEEQPYNTKRESSLMADLWRRQMPAQDARAVWDACHDTRVMEELMYS 1323
            NY  QLDS  ++HL   G+Y ++RYEDF  LP VV +L+  WAGLG +P ++  WID++TK+ NC   H  R                                           V G   D+                           I  +GA+       +REP    G   S   SG   V  G  +G   V   R   RK L    G GG   + +  +++ PY+TKR SS M +LWR+QMP  DA+AVWDAC  +RVMEEL YS
Sbjct:    3 NYLMQLDSPKQQHL-DHGKYLQVRYEDFATLPIVVDELLG-WAGLGPLPPTVAMWIDEHTKMPNCDVAHGPRTRRRMVTSLVATAASHEGCGGSMAVL-----------------VSGCEQDEQ----------------------HHREIGHTGALRKPENLRKREPFDLQGYATSVPASGTTAVSTGTTNGSPPV---RPDSRKVLLYDEGTGGDCINQKRYSDQHPYDTKRYSSAMVNLWRQQMPQADAKAVWDACQASRVMEELDYS 229

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: UPI0003F0A17A (carbohydrate sulfotransferase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0A17A)

HSP 1 Score: 63.5 bits (153), Expect = 1.530e-7
Identity = 52/169 (30.77%), Postives = 78/169 (46.15%), Query Frame = 1

Query:  268 ELQEKCKNSRAVAVKTIRLY--DGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQF-GLRPF-RAEIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAG--DGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCGPEHDRRN 756
            +L + CKN R VAVK IR Y  D +  +A        ++HLVRDPRA++ S+   F     F R  +P  E    + D               +C++ +  LD    L     G+Y  +RYED  L P   T  +Y ++G+  +   +E W+ +NT+ E  G     RN
Sbjct:   79 DLTKACKNKRHVAVKEIRFYKLDTLRTLAEDPNLNFKIIHLVRDPRAIINSRENSFFSNHDFKRKRVPWDE----VTD---------------LCKDLQHNLDLITTLPQWLKGKYFLVRYEDLALRPLEATRDIYNFSGM-PMDEDVEKWVYENTQTEQGGDLSTTRN 227

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: F7EXC4_MONDO (Sulfotransferase n=4 Tax=Monodelphis domestica TaxID=13616 RepID=F7EXC4_MONDO)

HSP 1 Score: 63.9 bits (154), Expect = 2.250e-7
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 1

Query:  271 LQEKCKNSRAVAVKTIRLYD--GVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRA-VGRYICQNYRKQLDSRRHLAGDG---RYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCG 735
            ++E CK+   VA+K +R ++   +  + R  +  +H++HL+RDPRAV RS+ R        +E+    ++   + W   + E R   + + ICQ+ +K++     L  D    RY  IRYED V  P   T  +Y + GL  +P  L+TW+ + T+ +  G
Sbjct:  195 MEETCKSYSHVAIKEVRFFNLKALYSLLRDPSLNLHIIHLIRDPRAVFRSRQRTG------SELGHDNRVVMGSQWNRLKNENRPYHLMKVICQS-QKEIYKAAKLLPDSLRERYLLIRYEDLVHDPLTQTSKLYEFVGLPFLP-HLQTWVQNITQGKGMG 347

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BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Match: UPI00032905FE (carbohydrate sulfotransferase 4 n=1 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI00032905FE)

HSP 1 Score: 62.8 bits (151), Expect = 4.860e-7
Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 1

Query:  253 RQAHEELQEKCKNSRAVAVKTIRLYD--GVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRAEIPGIEKLQGIADWQTRQRETRRA-VGRYICQNYRKQLDSRRHL--AGDGRYKRIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCGPEHDRRN 756
            R+  E ++E C++   V +K +R ++   +  + +  +  +H++HLVRDPRAV+RS+ R  G      ++    ++     W   + E R   V R IC++ R+  ++ + L  A   RY  +RYED V  P   T  +Y + GL  +P  L+TW+ + T+ +  G    R N
Sbjct:  157 REPFEVVEEACRSYSHVVLKEVRFFNLQALYPLLKDPSLNLHIVHLVRDPRAVLRSRERTSG------DLVVDSRMVVGQLWDHIKEEDRAFHVMRAICESQREIYEAAQLLPEALRRRYLLVRYEDLVRRPLTQTSQMYDFVGLKFLP-RLQTWVQNITQGKGLGNHAFRTN 322

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig17.2923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIC4_ECTSI	5.780e-111	43.59	Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta...	[more]
A0A6H5JR69_9PHAE	3.230e-43	44.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FWT3_ECTSI	4.170e-43	41.94	Sulfotransferase, C-terminal Sulfotransferase, N-t...	[more]
A0A6H5KSJ9_9PHAE	3.410e-35	54.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6G6CDI6_SACJA	3.010e-34	39.73	Sulfotransferase n=1 Tax=Saccharina japonica TaxID...	[more]
A0A7L4XQX3_SACJA	1.740e-31	37.55	Carbohydrate sulfotranserase n=2 Tax=Saccharina ja...	[more]
A0A6H5KKM2_9PHAE	6.470e-23	32.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI0003F0A17A	1.530e-7	30.77	carbohydrate sulfotransferase 1-like n=1 Tax=Sacco...	[more]
F7EXC4_MONDO	2.250e-7	30.43	Sulfotransferase n=4 Tax=Monodelphis domestica Tax...	[more]
UPI00032905FE	4.860e-7	29.48	carbohydrate sulfotransferase 4 n=1 Tax=Dasypus no...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig17	contig	P-fluviatile_contig17:326166..330102 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Mammalia
Seed ortholog score	65.5
Seed ortholog evalue	7.3e-08
Seed eggNOG ortholog	13616.ENSMODP00000028375
Preferred name	CHST4
KEGG ko	ko:K04746
KEGG Pathway	ko00533,map00533
GOs	GO:0000139,GO:0001517,GO:0002376,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006044,GO:0006082,GO:0006464,GO:0006477,GO:0006486,GO:0006493,GO:0006790,GO:0006807,GO:0006955,GO:0007154,GO:0007155,GO:0007267,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016266,GO:0016740,GO:0016782,GO:0018146,GO:0019538,GO:0022610,GO:0023052,GO:0030203,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031984,GO:0034645,GO:0036211,GO:0042339,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051923,GO:0070085,GO:0071704,GO:0098588,GO:0098791,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.	Sulfotransferase family
EggNOG OGs	299AF@1,2RGC5@2759,38G24@33154,3BMTS@33208,3CYE9@33213,3JCPU@40674,48BFY@7711,491CW@7742
COG Functional cat.	G
Best tax level	Mammalia
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01003
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Sulfotransferase
Ec32 ortholog	Ec-24_001640.1
Exons	4
Model size	1329
Cds size	1329
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig17.2923.1	prot_P-fluviatile_contig17.2923.1	Porterinema fluviatile SAG_2381	polypeptide	P-fluviatile_contig17 326166..330102 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815722.5836542-CDS-P-fluviatile_contig17:326165..326263	1622815722.5836542-CDS-P-fluviatile_contig17:326165..326263	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 326166..326263 +
1693563032.4374678-CDS-P-fluviatile_contig17:326165..326263	1693563032.4374678-CDS-P-fluviatile_contig17:326165..326263	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 326166..326263 +
1622815722.593768-CDS-P-fluviatile_contig17:326982..327180	1622815722.593768-CDS-P-fluviatile_contig17:326982..327180	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 326983..327180 +
1693563032.9034684-CDS-P-fluviatile_contig17:326982..327180	1693563032.9034684-CDS-P-fluviatile_contig17:326982..327180	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 326983..327180 +
1622815722.6049554-CDS-P-fluviatile_contig17:328474..328711	1622815722.6049554-CDS-P-fluviatile_contig17:328474..328711	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 328475..328711 +
1693563032.917198-CDS-P-fluviatile_contig17:328474..328711	1693563032.917198-CDS-P-fluviatile_contig17:328474..328711	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 328475..328711 +
1622815722.6175773-CDS-P-fluviatile_contig17:329306..330102	1622815722.6175773-CDS-P-fluviatile_contig17:329306..330102	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 329307..330102 +
1693563032.9277244-CDS-P-fluviatile_contig17:329306..330102	1693563032.9277244-CDS-P-fluviatile_contig17:329306..330102	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig17 329307..330102 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-fluviatile_contig17:326166..330102+
coding sequence from alignment at P-fluviatile_contig17:326166..330102+

protein sequence of mRNA_P-fluviatile_contig17.2923.1

>prot_P-fluviatile_contig17.2923.1 ID=prot_P-fluviatile_contig17.2923.1|Name=mRNA_P-fluviatile_contig17.2923.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=443bp
ILYVYEPCRGQGDGVLGTYEILRRAECFALARRLSRCEFTLRDSDRLGVD
EFAANFSSIAVSNVHHSIKASRQRGSSTGSEDALRQAHEELQEKCKNSRA
VAVKTIRLYDGVDDVARYDTSGIHLLHLVRDPRAVVRSQVRQFGLRPFRA
EIPGIEKLQGIADWQTRQRETRRAVGRYICQNYRKQLDSRRHLAGDGRYK
RIRYEDFVLLPRVVTDLVYCWAGLGEVPGSLETWIDDNTKLENCGPEHDR
RNRRRRRHHRRLAASREAARRRLAADSEAINGGGGGNGGTGGGDVRGMGV
DDSVTNDEDRRPDFPPPPPPVGNFWQSNSIVLSGAVVIERKSEEREPGRG
VSDESGVAVVDRGGEDGDAAVLSRRITRRKALGVGGGRCDNQNLAEEQPY
NTKRESSLMADLWRRQMPAQDARAVWDACHDTRVMEELMYSF*

mRNA from alignment at P-fluviatile_contig17:326166..330102+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-fluviatile_contig17.2923.1 ID=mRNA_P-fluviatile_contig17.2923.1|Name=mRNA_P-fluviatile_contig17.2923.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3937bp|location=Sequence derived from alignment at P-fluviatile_contig17:326166..330102+ (Porterinema fluviatile SAG_2381)
ATCCTTTACGTGTACGAGCCATGCCGAGGGCAGGGCGACGGCGTGCTAGG
CACATACGAGATACTTCGGCGGGCGGAATGTTTTGCGCTGGCACGAAGGT
GAGCAATGTCAATGGATGGGACTTACCGTGTCTGTGTGTGTTTGCGCGCG
CGCCACATCCATGCAGTTCCGGTCCTCTCCAGTTTGGGCCCCCATTTTAC
ATTTTGCTGGTTGATGCGGAGTTCTGATTTTTGCGGGGTGTCCGATGCCT
TGGCGTATTTGATTGGACCAAAATAGACGACGTCGGGCGGGTCTCTTCCG
GGACCTTCCAATACAGTTGTCCCCGCTTCACGATACCAGAATTATCAAGG
ACACTGCTCGCTGCAAGGACACTTCTTCTTCCTGAAGCATGGATCATAGA
CTATAACGATTCCTCTTTAGCTGAAGGTGAAGGACACTTTCCCGCGTTAA
CGACGCTCGAAATATGGAAAATGCATTGTGTTCTCTAAGCACGGATGAAT
GTACGCCCATCCATACGAATCACACACATCATTTAAGCGCAACGCGCGCC
GGGACACCAAAGGAAAAATGACGGTCTTGACATCGCCGAAACAACAAGCA
ATGCTATCCATTAAAGCAGCATGCCCACACACATGTAGCACACGCTTTTT
TTTTTTGTGCCAGTGTTGTCGATCCGTTTTTTTTTTGCTGTGCCAGTTCT
GCCAGACACAAAGCATCTCTCCAAATCAAGCCGCAGGGCTTGTCGTTGTG
CATTTCTCAACCAACAAAGACGATCATTGCCGGTTGTACGAAAACGGCCA
TTGATTTGCTGCTCCAGACTATCCCGGTGCGAGTTCACCCTGAGAGACTC
GGACCGGCTAGGCGTGGACGAGTTTGCCGCCAACTTCAGCTCGATCGCCG
TCTCCAACGTGCACCATTCAATCAAAGCTAGCCGACAGAGGGGTAGCAGC
ACCGGAAGCGAAGACGCGCTCCGTCAAGCGCACGAGGAGCTGCAGGAAAA
ATGCAAGAATAGCAGGTGGGGCGTGGGGATAAGGGATCTGGAAAGAGGTA
ATATCTAACATTAGCTGAGCGCTTTCCCAAGTGCCCGAAGAGTGAAACGA
CTGTGAAGCGGTGAGATTTGAAGCACTGCTTATCCCAAACGTTCATTTTA
TGCCTCAAACGCGGGCACCTGAATAAATATGTTGTTGTCGCCGCTGCAGA
GTCGGGCACAAAGCCTTTCCAGCCGGATCCCGTCGCCGTGGGATTGGGCG
GTGCGGGTGGCCACTGGAAGCGACACAGAGGGATCGTGCCACCGTCGCGT
TAAGCCATGTCCCACCGTTGTGTTGAGCCAATCTGTCAAATTCAAAACTC
AACAAAATGTGTGAATGCGCAACGGAAGATTTTTCCGCCTACCTCCTCTT
TTTTGCATCCCTCCTTCGCACAAGCCCCCAACCCCACATACAACACACGC
CGCACACACTCTTCAAACGTCCATCCAATTCTCAGCAAAGTTTCAAGAGC
GATTAGCACGCTTGAGAAGGTATCACCGCTAACGAAAGCAAGCAAGCTGA
AGAAGACCAGAGTCCTCGTGAACCGCATTCCATCGCCGAGACCGGGGTGC
CCGGTTGGCCGGGATGCCCGGCTGGAATGCGCGTCGTTGCGCAGACGCAC
CGAAGGCGTCATGGCGCATCGAACTCGACAGCTGACATCACCGCCGGTGT
CATTGTTGCAGGGACACTGCTCCCACTTGCGTCTAGATGTGAACATCGAA
ACACATAAATATTTCCAGTAAAATGTACCCTTTGAAAATTCCTCGGTAAG
AACCGAAACATCACGCTACGAAGAGCTCGTGATCACTACCTTCATGATCA
GGGCGACACTTGGTATGCCATGCAGATCGACCATAACATGTTTCCGTTAC
TCGCATCAGTGCTCGCATCAGAATTGTTAAGCTGAAAGGAGGACGGGGGG
GCGTCAGGCCCGCGTTCGGAGACCTTGTCAGCTGTATAATTCCTCTGTCT
TTGGAGACCGATTTCCACGTATTTTGCTGAGGGCACCTTCTCCTGATGCG
CTAGTCGGCATTCTTTGATTTCCCAGTGTAAAAAGGACCGCTAGCTTTCG
AATTCAAGCGCCAGGTACATCAAAAGCAAAGATTGAATTAAGGATTATCG
CCGAGTAGGAGACCCCCCGCGTACGCGCAGGTGACTTGCACGTATGGATC
CCCCCCGCGCATCCCCTTCCCACTACCCCCTCCCGCCCCTGCTGCTCTTC
TTCCTACCTGGCTTTTCTCCATCGCTCGATCTGTGGATTGTCTCGCTCGC
TAACCCCAGGGCAGTAGCGGTGAAGACGATCCGCCTCTACGACGGGGTGG
ACGACGTCGCCAGGTACGACACCTCGGGCATCCACCTCCTGCACCTCGTC
CGCGACCCCCGGGCCGTCGTGCGCTCCCAGGTCAGGCAGTTCGGGCTCCG
GCCCTTCCGGGCGGAGATACCCGGCATCGAGAAGCTGCAGGGCATAGCCG
ACTGGCAGACGCGGCAGAGGGAGACCAGGCGCGCAGTGGGACGATAGTGA
GTGCGAGCGTCCGCTTGATGCTGGCTCCAAGAGTCGAGTCAGTTGGTAGT
GGAAGAAACACTTCTTCGCCTGATTTGTCCCGGAAAGTCGACTGAATTTC
TACCTACACCTGCACTTGCGAGCCTGGATATGCTCCGCCGTTCTTTATTG
TTGTTGTTTTTGCTTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTGT
TCACATTACAACCTTTCCTATTACCCCCCTAGTACCTCCAAGTGTCTGTA
CCCTTTCCTGTTCTTGGCACGGGACGATTCACCCTTAAAAATGCAAGCAG
TGTCGACATTTAGCTGCGTTTTCAGACACGGTACCACGAAACTCCCCAGC
AAATATTGGACGAAGAAGGCAAGAAATCAACCTGCGTTTGAAAAGAACTT
AAGGAGACACGAACGCAAACATCCGCAACCTCGCGCGTCCTCACCACGCG
GAGCACCGTCTGGGCTCGTCGAAATTCTGGTCGGCTGATTGGCGTGTCGA
TATCGCGCAGCCAGCAAATGAAACAAGGGGTAGCACCGAAGTATGGAATT
TCTTACCCGCCCCACCCCACGCCCGTCCTGGCCCCGACCAGCATCTGTCA
GAACTACCGGAAGCAGCTGGACTCGCGGCGGCACCTGGCCGGCGACGGGA
GGTACAAGCGGATCCGGTACGAGGACTTCGTGCTGCTTCCCCGGGTGGTG
ACGGACCTGGTGTACTGCTGGGCCGGGCTCGGGGAGGTACCAGGGAGCCT
GGAGACCTGGATCGATGACAACACCAAGCTGGAAAACTGCGGCCCGGAAC
ACGACCGCCGCAATCGCCGCCGCCGCCGCCACCACCGCCGATTGGCGGCA
TCGCGCGAGGCCGCTCGTCGCCGCCTCGCCGCCGACAGCGAAGCAATCAA
CGGCGGCGGAGGCGGTAACGGCGGCACTGGTGGCGGAGACGTTCGGGGAA
TGGGCGTCGATGACAGCGTTACAAACGACGAGGACCGCCGCCCTGACTTC
CCGCCGCCACCGCCGCCGGTGGGAAATTTCTGGCAATCAAACTCCATCGT
ACTTTCTGGCGCTGTGGTTATTGAACGAAAATCCGAGGAGCGGGAGCCCG
GACGCGGCGTGTCCGACGAGAGCGGGGTAGCGGTGGTAGACCGAGGCGGA
GAAGACGGCGATGCTGCCGTGCTTTCGAGGCGGATCACTCGGCGGAAAGC
GCTCGGAGTCGGCGGAGGGAGGTGCGACAACCAGAATCTTGCCGAAGAGC
AGCCGTACAACACAAAGCGTGAGTCTTCTCTAATGGCTGACCTCTGGCGG
CGGCAGATGCCCGCGCAGGACGCGAGGGCCGTCTGGGACGCCTGCCACGA
CACGAGGGTCATGGAAGAGCTCATGTACTCGTTTTGA

Coding sequence (CDS) from alignment at P-fluviatile_contig17:326166..330102+

>mRNA_P-fluviatile_contig17.2923.1 ID=mRNA_P-fluviatile_contig17.2923.1|Name=mRNA_P-fluviatile_contig17.2923.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2658bp|location=Sequence derived from alignment at P-fluviatile_contig17:326166..330102+ (Porterinema fluviatile SAG_2381)
ATCCTTTACGTGTACGAGCCATGCCGAGGGCAGGGCGACGGCGTGCTAGG
CACATACGAGATACTTCGGCGGGCGGAATGTTTTGCGCTGGCACGAAGAT
CCTTTACGTGTACGAGCCATGCCGAGGGCAGGGCGACGGCGTGCTAGGCA
CATACGAGATACTTCGGCGGGCGGAATGTTTTGCGCTGGCACGAAGACTA
TCCCGGTGCGAGTTCACCCTGAGAGACTCGGACCGGCTAGGCGTGGACGA
GTTTGCCGCCAACTTCAGCTCGATCGCCGTCTCCAACGTGCACCATTCAA
TCAAAGCTAGCCGACAGAGGGGTAGCAGCACCGGAAGCGAAGACGCGCTC
CGTCAAGCGCACGAGGAGCTGCAGGAAAAATGCAAGAATAGCAGACTATC
CCGGTGCGAGTTCACCCTGAGAGACTCGGACCGGCTAGGCGTGGACGAGT
TTGCCGCCAACTTCAGCTCGATCGCCGTCTCCAACGTGCACCATTCAATC
AAAGCTAGCCGACAGAGGGGTAGCAGCACCGGAAGCGAAGACGCGCTCCG
TCAAGCGCACGAGGAGCTGCAGGAAAAATGCAAGAATAGCAGGGCAGTAG
CGGTGAAGACGATCCGCCTCTACGACGGGGTGGACGACGTCGCCAGGTAC
GACACCTCGGGCATCCACCTCCTGCACCTCGTCCGCGACCCCCGGGCCGT
CGTGCGCTCCCAGGTCAGGCAGTTCGGGCTCCGGCCCTTCCGGGCGGAGA
TACCCGGCATCGAGAAGCTGCAGGGCATAGCCGACTGGCAGACGCGGCAG
AGGGAGACCAGGCGCGCAGTGGGACGATAGGCAGTAGCGGTGAAGACGAT
CCGCCTCTACGACGGGGTGGACGACGTCGCCAGGTACGACACCTCGGGCA
TCCACCTCCTGCACCTCGTCCGCGACCCCCGGGCCGTCGTGCGCTCCCAG
GTCAGGCAGTTCGGGCTCCGGCCCTTCCGGGCGGAGATACCCGGCATCGA
GAAGCTGCAGGGCATAGCCGACTGGCAGACGCGGCAGAGGGAGACCAGGC
GCGCAGTGGGACGATACATCTGTCAGAACTACCGGAAGCAGCTGGACTCG
CGGCGGCACCTGGCCGGCGACGGGAGGTACAAGCGGATCCGGTACGAGGA
CTTCGTGCTGCTTCCCCGGGTGGTGACGGACCTGGTGTACTGCTGGGCCG
GGCTCGGGGAGGTACCAGGGAGCCTGGAGACCTGGATCGATGACAACACC
AAGCTGGAAAACTGCGGCCCGGAACACGACCGCCGCAATCGCCGCCGCCG
CCGCCACCACCGCCGATTGGCGGCATCGCGCGAGGCCGCTCGTCGCCGCC
TCGCCGCCGACAGCGAAGCAATCAACGGCGGCGGAGGCGGTAACGGCGGC
ACTGGTGGCGGAGACGTTCGGGGAATGGGCGTCGATGACAGCGTTACAAA
CGACGAGGACCGCCGCCCTGACTTCCCGCCGCCACCGCCGCCGGTGGGAA
ATTTCTGGCAATCAAACTCCATCGTACTTTCTGGCGCTGTGGTTATTGAA
CGAAAATCCGAGGAGCGGGAGCCCGGACGCGGCGTGTCCGACGAGAGCGG
GGTAGCGGTGGTAGACCGAGGCGGAGAAGACGGCGATGCTGCCGTGCTTT
CGAGGCGGATCACTCGGCGGAAAGCGCTCGGAGTCGGCGGAGGGAGGTGC
GACAACCAGAATCTTGCCGAAGAGCAGCCGTACAACACAAAGCGTGAGTC
TTCTCTAATGGCTGACCTCTGGCGGCGGCAGATGCCCGCGCAGGACGCGA
GGGCCGTCTGGGACGCCTGCCACGACACGAGGGTCATGGAAGAGCTCATG
TACTCGTTTTGACATCTGTCAGAACTACCGGAAGCAGCTGGACTCGCGGC
GGCACCTGGCCGGCGACGGGAGGTACAAGCGGATCCGGTACGAGGACTTC
GTGCTGCTTCCCCGGGTGGTGACGGACCTGGTGTACTGCTGGGCCGGGCT
CGGGGAGGTACCAGGGAGCCTGGAGACCTGGATCGATGACAACACCAAGC
TGGAAAACTGCGGCCCGGAACACGACCGCCGCAATCGCCGCCGCCGCCGC
CACCACCGCCGATTGGCGGCATCGCGCGAGGCCGCTCGTCGCCGCCTCGC
CGCCGACAGCGAAGCAATCAACGGCGGCGGAGGCGGTAACGGCGGCACTG
GTGGCGGAGACGTTCGGGGAATGGGCGTCGATGACAGCGTTACAAACGAC
GAGGACCGCCGCCCTGACTTCCCGCCGCCACCGCCGCCGGTGGGAAATTT
CTGGCAATCAAACTCCATCGTACTTTCTGGCGCTGTGGTTATTGAACGAA
AATCCGAGGAGCGGGAGCCCGGACGCGGCGTGTCCGACGAGAGCGGGGTA
GCGGTGGTAGACCGAGGCGGAGAAGACGGCGATGCTGCCGTGCTTTCGAG
GCGGATCACTCGGCGGAAAGCGCTCGGAGTCGGCGGAGGGAGGTGCGACA
ACCAGAATCTTGCCGAAGAGCAGCCGTACAACACAAAGCGTGAGTCTTCT
CTAATGGCTGACCTCTGGCGGCGGCAGATGCCCGCGCAGGACGCGAGGGC
CGTCTGGGACGCCTGCCACGACACGAGGGTCATGGAAGAGCTCATGTACT
CGTTTTGA