mRNA_P-fluviatile_contig16.2858.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: D8LB57_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB57_ECTSI) HSP 1 Score: 182 bits (463), Expect = 2.650e-51 Identity = 103/155 (66.45%), Postives = 108/155 (69.68%), Query Frame = 1
Query: 31 MMVPLFMKCAVAVATLVGGGSAFSVXXXXXXXXXXXXXXXXXXXXXXXX-----GTSKRD-EAAELPTSRKDVLGAVLGAAAMSSFAFVAAADAKDNPALKGTKADPEFVTCLSDCIYFCTKSKEQSRSRQECIPECRQTCAKTKAQGLIGAPRT 477
M+ P K AV VATL GGSAFS+ G D AAELPTSRKDVLGAV GAAAMSSFAFV+AADAKD+PALKGTKADPEFVTCLSDCIYFCTKSKEQSRSRQECIPE QT AKTKAQG+IGAPRT
Sbjct: 1 MVAPYVAKGAVVVATLACGGSAFSIPPSSAASAAAGVAGARPSSRHVMAAEAAPGPGSSDYSAAELPTSRKDVLGAVFGAAAMSSFAFVSAADAKDDPALKGTKADPEFVTCLSDCIYFCTKSKEQSRSRQECIPEXXQTXAKTKAQGMIGAPRT 155
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A836CLN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.280e-18 Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 217 SRKDVLGAVLGAAAMSSFAFVAAADAKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAPR 474
SR+DV + A+++++ F AA AKD+P+ GTK DP+F C+S CIY CTK K +RSR EC+PEC++ CA TKAQ + G P+
Sbjct: 41 SRRDVFAGI--ASSVAAVGFAGAAVAKDDPSKVGTKDDPKFQACISQCIYECTKPKGSMTRSRGECLPECKKNCATTKAQAMTGVPK 125
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A7S2GTD3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GTD3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 7.900e-15 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 205 ELPTSRKDVL--GAVLGAAAMSSFAFVAAADAKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAP 471
E P+SRK L A L ++S AF A + +PA+KGTKADP + C+S C+Y CTK K ++ +SRQECIPEC++ CA K Q +IG P
Sbjct: 39 EQPSSRKAFLQSSAALLPFVVASPAFAAK---EVDPAVKGTKADPAYQNCVSQCLYDCTKPKGDEQKSRQECIPECKKQCATDKQQLMIGTP 127
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A7S3QJL1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJL1_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.450e-14 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 211 PTSRKDVLGAVLGAAAMSSFAFVAAADAKD-NPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAP 471
P +R L + AA + A V ++ AKD +PALKGTK DP + CLS CI+ CTK K ++ +SR ECIPEC+ CA +K Q +IG P
Sbjct: 27 PLNRVSFLKSSFAAAGLVLTADVNSSVAKDIDPALKGTKNDPAYQACLSQCIFECTKPKGDEQKSRSECIPECKTKCATSKQQLMIGTP 115
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A1Z5JPE7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPE7_FISSO) HSP 1 Score: 80.1 bits (196), Expect = 1.550e-14 Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 196 EAAELPTSRKDVLGAVLGAAAMSSFAFVAAADAKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAPR 474
+A L +R L VLGAAA ++ A A A D PA+KGTK DP + CLS C+Y CTK K + +SRQEC+ CAKTKAQ ++G P+
Sbjct: 17 QAWSLSGTRAQFLQHVLGAAATATIALPAYAKEVD-PAIKGTKKDPNYEKCLSVCMYDCTKPKGSEQKSRQECLXXXXXKCAKTKAQLMLGTPK 109
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: K0SIG8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIG8_THAOC) HSP 1 Score: 83.2 bits (204), Expect = 2.220e-14 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 301 NPALKGTKADPEFVTCLSDCIYFCTKSKE-QSRSRQECIPECRQTCAKTKAQGLIGAPRT*FFFKLA 498
+PALKGTKADPE+ +CLS CIY CTK K + ++R EC+PEC+ CA TK Q L GAP+ F K A
Sbjct: 68 DPALKGTKADPEYQSCLSTCIYECTKPKGVEQKTRAECLPECKSKCATTKQQLLTGAPKNIFTKKTA 134
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A7S2XYH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.340e-13 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 250 AAAMSSFAFVAAADAKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAP 471
AA ++ A V+A K+ L GTK DP F CLS CIYFCTK K ++R R EC+PEC++ CA TK QGL+G P
Sbjct: 107 AALVAGAAPVSAKKVKEE--LIGTKDDPTFKNCLSQCIYFCTKPKGTETRERSECLPECKKQCATTKEQGLVGKP 179
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A6U3ZBC6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZBC6_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-13 Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 301 NPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAP 471
+P++KGTKADP + C+S C+Y CTK K ++ +SRQECIPEC++ CA K Q +IG+P
Sbjct: 71 DPSVKGTKADPAYQACVSQCLYDCTKPKGDEQKSRQECIPECKKQCATDKKQLMIGSP 128
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: W7TA95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TA95_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.220e-12 Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 259 MSSFAFVAAAD--AKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAPR 474
++ F A AD A +PA GTK DP + CLS CIYFC K K ++R+R +C+P+C+ CA+T AQ L+G P+
Sbjct: 83 LTPFVLTAGADVAAAVDPARVGTKKDPAYEKCLSSCIYFCLKPKGAETRTRSDCLPDCKAKCAQTDAQKLLGVPK 157
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Match: A0A6V2SB59_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2SB59_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 2.260e-10 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 283 AADAKDNPALKGTKADPEFVTCLSDCIYFCTKSK-EQSRSRQECIPECRQTCAKTKAQGLIGAPR 474
AA AKD +GTK DP+F C+S C+YFCTK K +++ R ECI C++ CA +K Q L+G+P+
Sbjct: 69 AALAKDGK--EGTKDDPKFQNCVSKCVYFCTKPKGSETKERSECIKPCKEQCATSKEQLLMGSPK 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2858.1 >prot_P-fluviatile_contig16.2858.1 ID=prot_P-fluviatile_contig16.2858.1|Name=mRNA_P-fluviatile_contig16.2858.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=150bp MMVPLFMKCAVAVATLVGGGSAFSVAASSRSTAVASQQQQSRHMMMAAAGback to top mRNA from alignment at P-fluviatile_contig16:2597194..2601065- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2858.1 ID=mRNA_P-fluviatile_contig16.2858.1|Name=mRNA_P-fluviatile_contig16.2858.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3872bp|location=Sequence derived from alignment at P-fluviatile_contig16:2597194..2601065- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:2597194..2601065- >mRNA_P-fluviatile_contig16.2858.1 ID=mRNA_P-fluviatile_contig16.2858.1|Name=mRNA_P-fluviatile_contig16.2858.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=900bp|location=Sequence derived from alignment at P-fluviatile_contig16:2597194..2601065- (Porterinema fluviatile SAG_2381)back to top |