mRNA_P-fluviatile_contig1.200.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.200.1
Unique NamemRNA_P-fluviatile_contig1.200.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A6H5JJZ7_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE)

HSP 1 Score: 681 bits (1756), Expect = 2.880e-222
Identity = 434/662 (65.56%), Postives = 463/662 (69.94%), Query Frame = 2 
Query:  602 RGGGEIVR---DITSFSPYAARLGGG-----NRPGDDVGRAAARLQALSFEHPGGYLESDE--SLQSPAKKHQRDKADAPAAAASGVEGVARRREAMQFFREGDSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEVGKQNSVGLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAIGSGGSVATEREKRTLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPL---GGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEEHFDENT-NIVNVSLSVLGPPPGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAGCCPSGRVVSVLEGGYSLEARVSRAKAAQQARANVKRA 2545
            RGGGE  R   DI SFSPYAARLG G     N PGD+VGRA ARL  L FEH  G    D+  +++SPAKK                                    XXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXX              XX                                       A     + ATER  RTLVVYPPECLLHM VE+HENHQEKPKRL+LLCG++GALRR  F+GLEW D S + PAL+TDLLRVHEYDYL    ERCAGA PSS P  P   +    L   G                  XXXX        FG RF ADVGYVDVDTRVSRESY AA  AAGAVILAVDRVVQG+NPNAFVAVRPPGHHAGPSGSVP+SSFWKNPGMNSSGFCL+NNAA+GAAYAR RYGRSGE+SRVAIVDIDIHHGNGTEEIVR CLRPM TRLPLPPSWPPMTKTVYKPWLD+ DADNV FGSVSLQDKDLFYPASGTE+E F++N  NIVNVSLS LGP PGDEPKKRAL KTK+ EYT KA  EFKQKCQRTLLARLK+FSPDLLIISAGFDGHVEDYYHYLSNE YEW+T +LA CCP+GRVVSVLEGGYSLEAR+SRAKAAQQARAN KRA
Sbjct:  117 RGGGERSRRGVDIASFSPYAARLGWGGSGITNSPGDEVGRAMARLAGLQFEHGDGDDGDDQEWAMESPAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIXXXXXXXXXXXXXXXXXXXXXXVIPVENMIVEGMPAQDMAITSAPFSKVGGLRQEGGDESMASPPSKTAATER--RTLVVYPPECLLHMGVEDHENHQEKPKRLDLLCGEQGALRRTTFQGLEWVDPSFVEPALITDLLRVHEYDYL----ERCAGAPPSSTPLGPDTAAVDHHLRHHGRNQLPXXXXXXXXXXXXXXXXXAAGDGRGGFGRRFEADVGYVDVDTRVSRESYGAARTAAGAVILAVDRVVQGKNPNAFVAVRPPGHHAGPSGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVR-CLRPMNTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEDERFNDNDDNIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARMSRAKAAQQARANNKRA 771
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: D8LN83_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 2.910e-190
Identity = 424/866 (48.96%), Postives = 456/866 (52.66%), Query Frame = 2 
Query:  626 DITSFSPYAARLGGG-----NRPGDDVGRAAARLQALSFEHPGGYLESDE--SLQSPAKKHQRD-----KADAPAAAASGVEGVARRREAMQFFREGDSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEVGKQNSVGLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAIGSGGSVATEREKRTLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKG-LEWADQSSITPALVTDLLRVHEYDYLLHIQ---------------------------------------------ERCAGAS--------------------------PSSVPQRPP-------------GES------------STTPLGGKS--------------TAVASFRKVSE-----------------------------------------------EGEAXXXXXXXXXXRE------------------FGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEEHFDEN-TNIVNVSLSVLGPPPGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAGCCPSGRVVSVLEGGYSLEARVSRAKAAQQARANVKRA---ETXXXXXXXXXXXXXXXXXXXXXXAKPALRERRN 2647
            DI SFSPYAARLG G     N PGD+VGRA ARL  L FEH  G    D+  +++SPAKKH  D     K  A  A   GV GVARR                                                                                                                                     VE+HENHQEKPKRLELLCG++GALRR  F+G LEW D S I PAL+TDLLRVHEYDYL+HIQ                                              R +G                            P S+   PP             GE             S +  GG+               +A+  +RK S                                                E +A          R                   FG RF ADVGYVDVDTRVSRESY AA  AAGAVILAVDRVVQG+NPNAFVAVRPPGHHAGPSGS P+SSFWKNPGMNSSGFCL+NNAA+GAAYAR RYGRSGE+SRVAIVDIDIHHGNGTEEIVR CLRPMTTRLPLPPSWPPMTKTVYKPWLD+ DADNV FGSVSLQDKDLFYPASGTEEE F++N  NIVNVSLS LGP PGDEPKKRAL KTK+ EYT KA  EFKQKCQRTLLARLK+FSPDLLIISAGFDGHVEDYYHYLSNE YEW+T +LA CCP+GRVVSVLEGGYSLEARVSRAKAAQQARAN KRA   ET  XXXXXXXXXXXXXXXXXXXX  PALRERRN
Sbjct:  136 DIASFSPYAARLGWGGSGSTNSPGDEVGRATARLAGLQFEHGDGDDGDDQEWAMESPAKKHHHDHDTYRKDSASPAPTGGVSGVARR------------------------------------------------------------------------------------------------------------------------------------GVEDHENHQEKPKRLELLCGEQGALRRTTFQGGLEWVDPSFIQPALITDLLRVHEYDYLVHIQGAVVYALGLLGNASLSALEEYRKGSAANGFPPPSPXXXXXXXXXXXRLSGGGDGDENLFASDPFQYASNAEVEAYAPEPQSMCGDPPCFTGWPINIHESRGEQNVSLRNPWTKARSRSSRGGEGAPHMLLSFGSHASISALEEYRKGSAANGFPPPSPXXSGGPQTSGDRLNGGGDGDENLFASDPFQYASNAEPPETDAWGFQEAVENGRPSIRPSKKKEEAAGDARGGFGRRFEADVGYVDVDTRVSRESYGAARTAAGAVILAVDRVVQGKNPNAFVAVRPPGHHAGPSGSAPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVR-CLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQARANNKRANKPETAAXXXXXXXXXXXXXXXXXXXXXXPALRERRN 868
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A836CER0_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA)

HSP 1 Score: 362 bits (928), Expect = 1.070e-105
Identity = 220/508 (43.31%), Postives = 282/508 (55.51%), Query Frame = 2 
Query: 1181 SVATEREKRTLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRSGEVS-----RVAIVDIDIHHGNGTEEI---------------VRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGT----------EEEHFDENTNIVNVSLS-VLGPPPGDEPKKRALAKT-------------------------------------KLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAGCCPSG--RVVSVLEGGYSLEAR 2494
            + A E  K TL++Y P+CL H+A    E+HQE P R++ LCG  GAL   AF  L+W D ++  PA ++DLLRVHEYDY+  +Q +C  A+            +  P      A+   R V + G A             G+ + +  GY+D DT ++ +S+A A  AAGAVI AVDRV+ G N NAFV VRPPGHHAGPSGSVP  +FW+NP MNSSGFCL+NN AVGAAYA +RYGR G+ +     RVAIVD DIH GNGTE+I               + R LRP   RLPLPPSWPP     YKPWLDE+DA+NV+F S++L     FYPASG           +E H     +I+N +L+ V G  PGD P +  LA+                                      + A+    A  + +  C+  LL RL  F+PD+L +SAGFDGH ED YH+ +N+ Y W+T  L  C  +G  RVVSVLEGGYSL  R
Sbjct:  186 AAALEPVKPTLLLYVPDCLEHVAWATREHHQECPARMDALCGPAGALHGPAFAALQWGDGAAARPATMSDLLRVHEYDYIALLQAKCEEAAKFEQRSATDAGKAADPA-----ALGGTRGV-DRGAAG------------GAEWGSPPGYLDADTLITAKSFAVARKAAGAVIEAVDRVMSGANKNAFVVVRPPGHHAGPSGSVPGPNFWRNPDMNSSGFCLVNNVAVGAAYAMARYGRGGQGASGGRFRVAIVDFDIHQGNGTEDIHXXXXXXXXXXXXXXIVRSLRPRRRRLPLPPSWPPAFAATYKPWLDEDDAENVMFASINLVQGHDFYPASGHASAGGGDGDGDELH---GGHIINAALAPVGGVAPGDLPPRARLAQVHNTSQQPQTNSAXXXXXXXXXXXXXXXXXXXXXXXPARAAKLRALASLQLRASCEEALLPRLAAFAPDVLFVSAGFDGHHEDMYHWNTNDDYAWLTRRLMECAAAGGGRVVSVLEGGYSLAPR 672
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A4D9CVT0_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVT0_9STRA)

HSP 1 Score: 336 bits (861), Expect = 1.100e-94
Identity = 222/559 (39.71%), Postives = 272/559 (48.66%), Query Frame = 2 
Query: 1205 RTLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASP-------------------------------SSVPQRPPGESSTTPL---------------------------------------------------------------------------------------GGKSTAVAS--------FRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRS--GEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DEEDADNVLFGSVSLQDKDLFYPASGTEEEHFDENTNIVNVSLSVLGPP---PGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAGCCP--SGRVVSVLEGGY 2479
            RTL++YPP CL H  +    NHQE   RL +LCG +G LRR  F  LEWAD +S+ PA  +D+LRVHEYDY+ H++  C    P                               S  P+  P  S T P+                                                                                       GG+   V +         R+    GEA             G +      ++D DTRV  +S+  A +AAGAVI AVD+V  G     FVA RPPGHHAGP G+VPS  FWK P M SSGFCL+NN A+GAAYAR  YGR+  G  +RVAIVD DIHHGNGTE+IVR  L+P    LPLP SW P    ++KPWL +EEDA +V FGS++L D   FYP SG E ++     NIVNV L  L PP   PG   K + L   K+ EY  +A  EF++K    LL +LK F+PDLL ISAGFDGHVED+YHYL+ E Y WIT  L       SG+V+SVLEGGY
Sbjct:  272 RTLIIYPPACLEHETL----NHQESKDRLLVLCGPQGVLRRPRFASLEWADGASVLPATTSDILRVHEYDYIRHLRAICQALPPVPHHSKPGYGEVGGATIEEGEGEEVASSLLASLPPEFQPEHSPTPPVDLVPAPPVRSSPAFPSSGASSPAEKDEDETXXXXXXXXXXXXHRRANNATPSTCAPILKHHTSIRDFPAEKREVVGEEREKGEGSPEGGEGLGVDAGGHPSGRRLRRADRGGEAFEKKERAGSLSGHGGQETVSQ-FLDSDTRVCHDSFRVACVAAGAVIQAVDQVAAGRR-RVFVATRPPGHHAGPRGAVPSHCFWKAPSMTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVR-ALQPSRRLLPLPASWAPEHYQIFKPWLSEEEDAASVFFGSINLVDGSHFYPCSGREMDNDQAAPNIVNVELRPLRPPQAAPGTG-KAKMLGPRKVKEYCQRASGEFREKVSSMLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 822
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A8K1C2K1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K1_PYTOL)

HSP 1 Score: 326 bits (836), Expect = 2.950e-93
Identity = 193/456 (42.32%), Postives = 264/456 (57.89%), Query Frame = 2 
Query: 1208 TLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADV---GYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRY------------------GRSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGT----EEEHFDENTNIVNVSLSVLGPPPGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAG----CCPSGRVVSVLEGGYSLE 2488
            TLVVY P CL H     ++ HQE  +RL +LCG +G L++  F+ L+WA+   + PA + D+LRVH + Y+ H++  C G     +P++     S  PL  +S   AS +  S+                     V +    G  D D+ +SR SY AA +AAGAV  A+D+VV+ E  NAFV VRPPGHHAGP+G V S  F + P M + GFCL+NN A+GA YA S Y                  G   E++R+AIVD DIHHGNGTEEI+R  L P   + PLP SW P++   YKPW DE D DNV F S+ L D+D FYP SG     +     +  NI+N+ LS LGP   +E +++   K K A    +A  +F++K  + L+  L+ F PDL+++SAGFDGH +D+Y+YL+ + Y W+TT L G    CC  GR+VSVLEGGY++E
Sbjct:  210 TLVVYQPTCLDH----HNDTHQENRERLSVLCGPQGILQKPRFRSLKWANLRELKPARLNDVLRVHSFQYIRHLERLCDG-----LPEQN-DRYSVGPLYLESHRTASKKDKSKPKTTLSPLEWMKTEHAKRCYEVTNPPSSGLFDTDSPISRRSYDAARLAAGAVCHAIDKVVRRETKNAFVVVRPPGHHAGPNGCVESEGFHRRPEMCTCGFCLLNNVAIGAGYAMSTYSTPYYSKTSPSRSSSKDQGEHAEITRIAIVDFDIHHGNGTEEIIRN-LVPHDQKYPLPSSWAPLSFPSYKPWRDENDIDNVFFSSIHLFDEDNFYPCSGKGPQGDSAELQQVENILNLPLSFLGPKYLEE-REKLTVKAKKA-LMDQASRQFREKVSKKLVPALRAFQPDLILLSAGFDGHADDFYYYLTEDDYAWVTTELTGVADECC-EGRLVSVLEGGYNVE 651
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A0W8DNI8_PHYNI (ATP-binding Cassette (ABC) Superfamily n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DNI8_PHYNI)

HSP 1 Score: 310 bits (795), Expect = 1.060e-87
Identity = 187/454 (41.19%), Postives = 252/454 (55.51%), Query Frame = 2 
Query: 1208 TLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYG--------------------RSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEE----HFDENTNIVNVSLSVLGPPPGDEPKK-RALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWIT---TSLAGCCPSGRVVSVLEGGYSL 2485
            TL+VY P CL H     +++HQE  +RL +L G  G L ++ FK L+WA+ + + PA + D+LRVH  +Y+ H++  C G  P    +   G       G K    A + +     +            E G +     G  D+D+ +S+ SY AA MAAGAV  A+D+V+  E  NAFV VRPPGHHAGP+G V    F   P M + GFCLINN  +GA+YA S Y                     +   + RVAIVD DIHHGNGTEE++R  + P     PLPPSW P+  + YKPW DE D DNV F S+ L D D FYP SG          +++ NIVN+ L VLGP   DE  K  + AK  L E ++K    F+    + L+  L  F PDL+++SAGFDGH +D+Y++LS + Y WIT   T++A  C  GR+VSVLEGGY++
Sbjct:  128 TLLVYQPTCLDH----HNDSHQESRQRLCVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERAC-GNLPEQNKKYLVGTLYDKHKGDKELTYAEWLQTEHALKCF----------EVGDQ--PSAGSFDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLI-PHKQNYPLPPSWAPVQFSSYKPWRDENDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSKNIVNLPLKVLGPKYLDERLKLTSKAKRSLMEQSSKT---FRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYNV 560
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: K3WTA3_GLOUD (Hist_deacetyl domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTA3_GLOUD)

HSP 1 Score: 311 bits (797), Expect = 1.280e-87
Identity = 185/446 (41.48%), Postives = 252/446 (56.50%), Query Frame = 2 
Query: 1208 TLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRS-----------GEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEE----HFDENTNIVNVSLSVLGPPPGDEPKK-RALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAG----CCPSGRVVSVLEGGYSL 2485
            TL+VY P CL H     ++ HQE  +RL +LCG  G L ++ FK L+WA+ + + PA + D+LRVH ++Y+ H+ ER  G  P                  ++ +V      +++             + +        G  D+D  +S+ SY AA +AAGAV  A+D+V+  +  NAFV VRPPGHHAGP+G V + +F + P M + GFCL+NN A+GAAYA S Y  S             + RVAIVD DIHHGNGTEE +R  L P     PLPPSW P+  + YKPW DE+D +NVLF S+ L D D FYP SG+          ++ NI+N+ L  LGP   +E  K  A AK  L E  +KA   F+      LL  L  F PDL+++SAGFDGH +D+Y++LS + Y WIT  +A     CC  GR+VSVLEGGY++
Sbjct:  239 TLLVYQPTCLDH----HNDTHQENRERLGVLCGPEGVLHKDRFKDLQWANLNELKPARLNDMLRVHSFEYIQHL-ERVCGLLPEQD---------------EAYSVGRLYDENKDLSYSDWINSEKAKKCYTVTNPPSSGTFDMDAPISKSSYLAARLAAGAVCHAIDKVLTHDAKNAFVVVRPPGHHAGPNGCVEADTFHRRPEMCTCGFCLLNNVAIGAAYALSTYSASYYTSHNGKNASKPIERVAIVDFDIHHGNGTEECIRN-LTPHKQNYPLPPSWAPLQFSSYKPWRDEKDQENVLFASIHLYDDDNFYPCSGSGPHGCSPELRDHPNIINMPLDTLGPKYLEERLKLTAKAKKSLMEQASKA---FRHNVTTRLLPALTKFHPDLILLSAGFDGHADDFYYFLSEDDYGWITEQIAAVADECC-DGRIVSVLEGGYNV 659
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: D0N3Q6_PHYIT (Histone deacetylase, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N3Q6_PHYIT)

HSP 1 Score: 307 bits (786), Expect = 1.380e-86
Identity = 185/455 (40.66%), Postives = 252/455 (55.38%), Query Frame = 2 
Query: 1208 TLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRY---------------------GRSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEE----HFDENTNIVNVSLSVLGPPPGDEPKK-RALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWIT---TSLAGCCPSGRVVSVLEGGYSL 2485
            TL+VY P CL H     +++HQE  +RL +L G  G L ++ FK L+WA+ + + PA + D+LRVH  +Y+ H++  C G  P    +   G       G K     ++ +                 + FG       G  D+D+ +S+ SY AA MAAGAV  A+D+V+  E  NAFV VRPPGHHAGP+G V    F   P M + GFCLINN  +GA+YA S Y                      +   V RVAIVD DIHHGNGTEE++R  + P     PLPPSW P+  + YKPW DE D +NV F S+ L D D FYP SG          +++ N+VN+ L VLGP   DE  K  + AK  L E ++KA   F+    + L+  L  F PDL+++SAGFDGH +D+Y++LS + Y WIT   T++A  C  GR++SVLEGGY++
Sbjct:  189 TLLVYQPTCLDH----HNDSHQESRQRLCVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERAC-GNLPEQSKKYLVGTLFDKEKGDKELTYDAWLQTKHA------------LKCFGVGDQPSGGSFDMDSPISKSSYMAARMAAGAVCHAIDKVLSNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYYTPYYTHPAVSNMASETLVATRKRVNVQRVAIVDFDIHHGNGTEEVIRNLI-PHKQNYPLPPSWAPVQFSSYKPWRDERDPENVFFSSIHLYDDDNFYPCSGVGPHGCSPELEKSKNVVNLPLKVLGPKYLDERLKLSSKAKRSLMEISSKA---FRDTVTKKLVPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITEQITAVAEDCCDGRIISVLEGGYNV 622
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: T0R736_SAPDV (Hist_deacetyl domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R736_SAPDV)

HSP 1 Score: 303 bits (775), Expect = 2.130e-86
Identity = 196/452 (43.36%), Postives = 244/452 (53.98%), Query Frame = 2 
Query: 1184 VATEREKRTLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGY-VDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRYGRS---------GEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDL-FYPASGTEEEHFDE----NTNIVNVSLSVLGPPPGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSL---AGCCPSGRVVSVLEGGYSL 2485
            V  E    TL+VY P CL H        HQE  +R+  LCG  G L    F+ L WA    + PA + DL RVH   YL H++  CA   P                     A  S +   E   +           +     + +    +D D  +S+ES+  A  A GAV+ AVD VV G + NAFV VRPPGHHAGP G V + +F K+PG  S GFCL+NN A+GAAYA + YG S           V RVAI+D DIHHGNGTEEIVR  LR    R PLPPSW P T   Y PW D++DADNV F S+ + D+   FYP SG      +E    NT IVN+ L+ LG        KR   +T+L E+  +A +EF+ K    LL  L+ F+PDL++IS+GFDGHV+DYYH L+   YEWIT  L   A  C  GR+VSVLEGGYSL
Sbjct:   95 VLDEEGDATLIVYQPSCLDHHT----GRHQENRQRVAALCGPHGVLNLPRFQHLRWAPLDQLVPARLVDLERVHSRAYLRHLEATCALLPPQD-------------------ANLSIQNEFEGHRSHKSWIQTTKAVKCHEDTICNAAVDLDPDMPISKESFMTARYAVGAVLHAVDEVVCGRSRNAFVVVRPPGHHAGPYGCVENDAFHKSPGGCSCGFCLLNNVAIGAAYAMTTYGPSHYSKASISHATVRRVAIIDFDIHHGNGTEEIVRN-LRLHDHRYPLPPSWAPKTFPSYMPWRDDDDADNVFFASMHVYDETTAFYPGSGRGPHGRNELASCNT-IVNIPLTNLG-----ASGKRGTERTRL-EHMERASSEFQSKATEVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSL 515
[Close]
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Match: A0A3F2RKP9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKP9_9STRA)

HSP 1 Score: 306 bits (785), Expect = 2.560e-86
Identity = 189/458 (41.27%), Postives = 250/458 (54.59%), Query Frame = 2 
Query: 1208 TLVVYPPECLLHMAVEEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRVHEYDYLLHIQERCAGASPSSVPQRPPG---ESSTTPLGGKSTAVASFRKVSEEGEAXXXXXXXXXXREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVILAVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLINNAAVGAAYARSRY------------GRSGE---------VSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEE----HFDENTNIVNVSLSVLGPPPGDEPKK-RALAKTKLAEYTTKAGTEFKQKCQRTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWIT---TSLAGCCPSGRVVSVLEGGYSL 2485
            TL+VY P CL H     +++HQE  +RL +L G  G L +  F  L WA+ + + PA + D+LRVH ++Y+ H++  C G  P    +   G   +  T  +  K      + K                 + F        G  D+D+ +S+ SY AA MAAGAV  AVD+V+  E  NAFV VRPPGHHAGP+G V    F   P M + GFCL+NN  +GA+YA S Y              SG          + RVAIVD DIHHGNGTEE++R  + P     PLPPSW P+  + YKPW DE D DNV F S+ L D D FYP SG          +++ NIVN+ L  LGP   DE  K  A AK +L E  +KA   F+    + L+  L  F PDL++ISAGFDGH +D+Y++L+ + Y WIT   T++A  C  GRVVSVLEGGY++
Sbjct:  120 TLLVYQPTCLDH----HNDSHQESRQRLCVLGGPEGVLHKERFNDLTWANLNELRPAQLDDILRVHTFEYIQHLERAC-GNLPEQNSEYLVGTLYDKQTDEIKSKELTFTEWLKTENA------------LKCFEVEDQPSGGSFDMDSPISKSSYMAARMAAGAVCHAVDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPDMCTCGFCLLNNVCIGASYAMSNYCAPYYTPPTPGSSNSGSLLEPRKRVGIKRVAIVDFDIHHGNGTEEVIRNLI-PHKQNYPLPPSWAPVQFSSYKPWRDETDPDNVFFSSIHLYDDDNFYPCSGAGPHGCSPELEKSKNIVNLPLKALGPKYLDERVKLSAKAKRQLMEQASKA---FRDNVTKKLIPALTKFRPDLIMISAGFDGHADDFYYFLTEDDYSWITEQVTAVAEDCCDGRVVSVLEGGYNV 556
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJZ7_9PHAE2.880e-22265.56Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LN83_ECTSI2.910e-19048.96Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A836CER0_9STRA1.070e-10543.31Histone deacetylase domain-containing protein n=1 ... [more]
A0A4D9CVT0_9STRA1.100e-9439.71Hist_deacetyl domain-containing protein n=1 Tax=Na... [more]
A0A8K1C2K1_PYTOL2.950e-9342.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8DNI8_PHYNI1.060e-8741.19ATP-binding Cassette (ABC) Superfamily n=11 Tax=Ph... [more]
K3WTA3_GLOUD1.280e-8741.48Hist_deacetyl domain-containing protein n=1 Tax=Gl... [more]
D0N3Q6_PHYIT1.380e-8640.66Histone deacetylase, putative n=3 Tax=Phytophthora... [more]
T0R736_SAPDV2.130e-8643.36Hist_deacetyl domain-containing protein n=1 Tax=Sa... [more]
A0A3F2RKP9_9STRA2.560e-8641.27Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2560693..2574325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score609.8
Seed ortholog evalue2.2e-171
Seed eggNOG ortholog2880.D8LN83
EggNOG free text desc.NAD-dependent histone deacetylase activity (H3-K14 specific)
EggNOG OGsCOG0123@1,KOG1343@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone deacetylase
Ec32 orthologEc-05_003890.1
Exons16
Model size4041
Cds size2880
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.200.1prot_P-fluviatile_contig1.200.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 2562391..2573366 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815303.741301-UTR-P-fluviatile_contig1:2560692..25608051622815303.741301-UTR-P-fluviatile_contig1:2560692..2560805Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2560693..2560805 +
1693561449.6563902-UTR-P-fluviatile_contig1:2560692..25608051693561449.6563902-UTR-P-fluviatile_contig1:2560692..2560805Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2560693..2560805 +
1622815303.7503848-UTR-P-fluviatile_contig1:2562301..25623901622815303.7503848-UTR-P-fluviatile_contig1:2562301..2562390Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2562302..2562390 +
1693561449.6652274-UTR-P-fluviatile_contig1:2562301..25623901693561449.6652274-UTR-P-fluviatile_contig1:2562301..2562390Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2562302..2562390 +
1622815303.9662082-UTR-P-fluviatile_contig1:2573366..25743251622815303.9662082-UTR-P-fluviatile_contig1:2573366..2574325Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2573367..2574325 +
1693561449.8113127-UTR-P-fluviatile_contig1:2573366..25743251693561449.8113127-UTR-P-fluviatile_contig1:2573366..2574325Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2573367..2574325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815303.7600315-CDS-P-fluviatile_contig1:2562390..25628841622815303.7600315-CDS-P-fluviatile_contig1:2562390..2562884Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2562391..2562884 +
1693561449.6725016-CDS-P-fluviatile_contig1:2562390..25628841693561449.6725016-CDS-P-fluviatile_contig1:2562390..2562884Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2562391..2562884 +
1622815303.7723293-CDS-P-fluviatile_contig1:2563150..25633121622815303.7723293-CDS-P-fluviatile_contig1:2563150..2563312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2563151..2563312 +
1693561449.6799524-CDS-P-fluviatile_contig1:2563150..25633121693561449.6799524-CDS-P-fluviatile_contig1:2563150..2563312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2563151..2563312 +
1622815303.7818177-CDS-P-fluviatile_contig1:2563873..25642601622815303.7818177-CDS-P-fluviatile_contig1:2563873..2564260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2563874..2564260 +
1693561449.6872537-CDS-P-fluviatile_contig1:2563873..25642601693561449.6872537-CDS-P-fluviatile_contig1:2563873..2564260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2563874..2564260 +
1622815303.8209343-CDS-P-fluviatile_contig1:2564959..25650541622815303.8209343-CDS-P-fluviatile_contig1:2564959..2565054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2564960..2565054 +
1693561449.6950707-CDS-P-fluviatile_contig1:2564959..25650541693561449.6950707-CDS-P-fluviatile_contig1:2564959..2565054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2564960..2565054 +
1622815303.8337283-CDS-P-fluviatile_contig1:2565354..25654461622815303.8337283-CDS-P-fluviatile_contig1:2565354..2565446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2565355..2565446 +
1693561449.7048075-CDS-P-fluviatile_contig1:2565354..25654461693561449.7048075-CDS-P-fluviatile_contig1:2565354..2565446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2565355..2565446 +
1622815303.8499959-CDS-P-fluviatile_contig1:2566005..25662781622815303.8499959-CDS-P-fluviatile_contig1:2566005..2566278Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2566006..2566278 +
1693561449.7145133-CDS-P-fluviatile_contig1:2566005..25662781693561449.7145133-CDS-P-fluviatile_contig1:2566005..2566278Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2566006..2566278 +
1622815303.8621786-CDS-P-fluviatile_contig1:2566889..25669661622815303.8621786-CDS-P-fluviatile_contig1:2566889..2566966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2566890..2566966 +
1693561449.724133-CDS-P-fluviatile_contig1:2566889..25669661693561449.724133-CDS-P-fluviatile_contig1:2566889..2566966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2566890..2566966 +
1622815303.8740811-CDS-P-fluviatile_contig1:2567736..25678411622815303.8740811-CDS-P-fluviatile_contig1:2567736..2567841Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2567737..2567841 +
1693561449.7335696-CDS-P-fluviatile_contig1:2567736..25678411693561449.7335696-CDS-P-fluviatile_contig1:2567736..2567841Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2567737..2567841 +
1622815303.8849137-CDS-P-fluviatile_contig1:2568381..25684651622815303.8849137-CDS-P-fluviatile_contig1:2568381..2568465Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2568382..2568465 +
1693561449.7472548-CDS-P-fluviatile_contig1:2568381..25684651693561449.7472548-CDS-P-fluviatile_contig1:2568381..2568465Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2568382..2568465 +
1622815303.8955705-CDS-P-fluviatile_contig1:2569365..25695261622815303.8955705-CDS-P-fluviatile_contig1:2569365..2569526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2569366..2569526 +
1693561449.7558534-CDS-P-fluviatile_contig1:2569365..25695261693561449.7558534-CDS-P-fluviatile_contig1:2569365..2569526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2569366..2569526 +
1622815303.9070451-CDS-P-fluviatile_contig1:2570276..25703611622815303.9070451-CDS-P-fluviatile_contig1:2570276..2570361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2570277..2570361 +
1693561449.7631333-CDS-P-fluviatile_contig1:2570276..25703611693561449.7631333-CDS-P-fluviatile_contig1:2570276..2570361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2570277..2570361 +
1622815303.9171827-CDS-P-fluviatile_contig1:2570766..25708481622815303.9171827-CDS-P-fluviatile_contig1:2570766..2570848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2570767..2570848 +
1693561449.7704825-CDS-P-fluviatile_contig1:2570766..25708481693561449.7704825-CDS-P-fluviatile_contig1:2570766..2570848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2570767..2570848 +
1622815303.933556-CDS-P-fluviatile_contig1:2571310..25713651622815303.933556-CDS-P-fluviatile_contig1:2571310..2571365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2571311..2571365 +
1693561449.7781646-CDS-P-fluviatile_contig1:2571310..25713651693561449.7781646-CDS-P-fluviatile_contig1:2571310..2571365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2571311..2571365 +
1622815303.943696-CDS-P-fluviatile_contig1:2572313..25724801622815303.943696-CDS-P-fluviatile_contig1:2572313..2572480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2572314..2572480 +
1693561449.7950609-CDS-P-fluviatile_contig1:2572313..25724801693561449.7950609-CDS-P-fluviatile_contig1:2572313..2572480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2572314..2572480 +
1622815303.955594-CDS-P-fluviatile_contig1:2572805..25733661622815303.955594-CDS-P-fluviatile_contig1:2572805..2573366Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2572806..2573366 +
1693561449.8039944-CDS-P-fluviatile_contig1:2572805..25733661693561449.8039944-CDS-P-fluviatile_contig1:2572805..2573366Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2572806..2573366 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.200.1

>prot_P-fluviatile_contig1.200.1 ID=prot_P-fluviatile_contig1.200.1|Name=mRNA_P-fluviatile_contig1.200.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=960bp
MGPSPPRHRRSSSPARRASSPRSRRSSSPPRSWSPSLPPPSLLAPPSVVY
AAADLNRGPAHVVTSTTPIAGGGETLTDVTGEAAGRIDDWMSQKRRESSC
AGNRSGGNGGGAGDRTEATDPMDTENEGGEDGGRGGGEIVRDITSFSPYA
ARLGGGNRPGDDVGRAAARLQALSFEHPGGYLESDESLQSPAKKHQRDKA
DAPAAAASGVEGVARRREAMQFFREGDSLPPPPCQQQQQQYHQPVVGKPS
DTDDITAAATAPTAAAVEVGKQNSVGLVAAATGTAAAPGTYYPAAASAAS
ASASLARNGGGLRQQEGGGHAIGSGGSVATEREKRTLVVYPPECLLHMAV
EEHENHQEKPKRLELLCGDRGALRRNAFKGLEWADQSSITPALVTDLLRV
HEYDYLLHIQERCAGASPSSVPQRPPGESSTTPLGGKSTAVASFRKVSEE
GEAAAAKRRRQQQREFGSRFVADVGYVDVDTRVSRESYAAATMAAGAVIL
AVDRVVQGENPNAFVAVRPPGHHAGPSGSVPSSSFWKNPGMNSSGFCLIN
NAAVGAAYARSRYGRSGEVSRVAIVDIDIHHGNGTEEIVRRCLRPMTTRL
PLPPSWPPMTKTVYKPWLDEEDADNVLFGSVSLQDKDLFYPASGTEEEHF
DENTNIVNVSLSVLGPPPGDEPKKRALAKTKLAEYTTKAGTEFKQKCQRT
LLARLKDFSPDLLIISAGFDGHVEDYYHYLSNETYEWITTSLAGCCPSGR
VVSVLEGGYSLEARVSRAKAAQQARANVKRAETAAATAVTAAAAAASSGP
SGTSGAKPALRERRNRTRAAASSSSAANAHPGPALPIPPPTAGAAAAAAA
PAVIPPAAADVLVGAPPTPPSIPALPVVRTVSTLSSLSLSGDHTSGSVLG
AVARDTSGTGGAAGPGGGGFDASGGGRMEKKGSRKNLAAAAAAAAREEED
AALQPGTAA*
back to top

mRNA from alignment at P-fluviatile_contig1:2560693..2574325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.200.1 ID=mRNA_P-fluviatile_contig1.200.1|Name=mRNA_P-fluviatile_contig1.200.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13633bp|location=Sequence derived from alignment at P-fluviatile_contig1:2560693..2574325+ (Porterinema fluviatile SAG_2381)
AAGGTGCTCTGCTTGCGCTGAAGCCCGAGAACCGACCCTTCCAAAGCGGG
CGTTCAAGCACTGGTTCAACTGACCAAGTGCTTTGCTTGATTTATTTTGT
GGGTGGCTGTGAGGTGAGCGTTAGACTAGGAGGAGAGCAAGTACAGCAGC
GTTGATTTTGAAATTTGTATTTTTTGCTCTTCCAGATAGCTAGTGAGTAG
CACGCGCGCGGCGGTCACACTCGATCCCAAGCGCGTATGTCGCGTTCATG
GTTCTTTTTGACAGTTGATGGCCGCACGCCGCGGAACGCCGCGCGACTAC
CTAGCAAGACAATATTTTTTATGTGGGTGTGGAATCACTCTAGGCTGCCA
GAGTAGAACGAACCCGACTAATGCTTGCATTTTGTGGGGCCCGAAACATG
TGTGTTCCGTACACACGGCGCGATAAGCTTATGTCGCCAGTTTCGAGAGT
CCGACTGATGCTTGTATTTTGTGGTCTGTTGTGTGTTTTTATACACACGG
CACGACGGGCATATGGCGATGGCGCGTAAATTACGCAACGGCTCAACTTT
CCTTGTCAGGCAAGCTCGACAGCGCGCGAATGTGCGTTGTCGGTGGGCCA
GGTATTTCTTGTGTGGATAGCAGGCGGCATGGACCATCTCGTTCTGGCGG
TTCAGTTTCAAGTGCTGCTGCTATTTTTCATGGTGTAGAGGAGAACGGCC
TCATCATTTGCGACGGCCGCATGAAGGTGCTAATGATATTCTTCCGCATC
CGGTAAAATTTACAGGTAGGCTATCAATCTATTCACGACAACGAAGTTTC
CAAAAAGAAAAACAAGTTTGCCACCGAATTTGGCTTTCAGGAAGCTTCGG
GAGCAAAAAACATACAAACGAGGGGTAAATCTTTCGTGCGATGTGAGAAG
GTGACGGCGATCCGCAGGAGGAACCATTGGAGAGGGAATGAGAGGCACAC
AGGGGCATTCGAACGTCGCCGACTTAGCCCACAAACTCTTGCAGACAGAC
CAGAACGAAACACGAATACCAGCCCCTGCGGAGCGCGGTTTCTTAGCAGC
TGCCTCAACTCAAAAGACGACACGGCAGGCTCGTGCACACGCGCACACGC
ACAAGTCATGGTTGATCGGGCTGCCTCATGCGCGGATTAAAATGATGCGT
GCGTGAGGCATGTGTGGCTGTGTGATGGGAGGAAGTGGGTTGACAGCCAG
TCGCGCGTCCGCTCGTGTGGTATGTGCCGCGAAATGTGGTCCATTTTCAA
CTTTAAAATCTTCAACTGATAGCGCCTGCGCACAGTTGATTGGTCAACCT
CTGTTTTTTTTTGTTGCACCGAGGTTCTTGCTGAGCAAAAGTTACTCTTG
CGCAAACACGTTCATGCCCGCGATGTCTCCCGGCGCGTTTTTTCTCGCCA
CGTGCTGAAGATTATTTAATGCGGAGGTTTCCCCTACCCCCCCGTCCCCC
CCAAGTGCCCTCTCCTTTGAAGAGTGGCGTTGGGTCGGCAACCACGTCAC
CACAGTTGCGATGCAAACACGAGAGTCATTCCCCCGCACTGCCCAGCGCC
TCTCCGCACTCCCTTCACCCCCCGCGCGGATTCGCATATCGGACGAACTC
CCTCAGCAGGCAAGCGCGAGATTCATCTTTCGTTTGAGCCTCTGGGCGCC
GTCGAAGAGAAACCGGGCGCTCGTCAGAGTCTGCGTGTGAGACCGGAGAT
GGGGCCATCCCCGCCCCGCCACCGCCGGTCGTCTTCCCCCGCCCGCCGGG
CGTCCTCTCCGCGATCCCGTCGCAGCTCGTCGCCGCCGCGGTCGTGGTCG
CCGTCGCTGCCGCCGCCTTCTCTTCTCGCCCCTCCTTCCGTCGTCTACGC
CGCGGCCGACCTCAACCGGGGGCCGGCCCACGTCGTGACCTCGACAACAC
CAATCGCCGGCGGCGGCGAGACCTTGACCGATGTGACCGGCGAGGCTGCC
GGCAGGATCGACGACTGGATGAGCCAGAAGCGGCGGGAATCGTCGTGCGC
CGGCAACCGAAGCGGTGGCAACGGCGGCGGTGCCGGTGACCGGACGGAGG
CGACGGACCCGATGGATACGGAGAACGAGGGCGGCGAAGACGGGGGGCGG
GGCGGCGGAGAGATTGTCAGGGACATCACGTCGTTTTCGCCGTACGCGGC
CCGCCTCGGGGGCGGAAACCGCCCAGGGGATGACGTGGGCAGGTAAGATC
TGGAACCTCAACACAAAGTGTGCAGCTGGAAATGGAGATTGGCGGCGAAG
CTTATTTATTCTCAAATGAAACTTGACCGGGACCATAAACAGCGCAATCT
TCGTAGATATCTCGTTTCTTCACAGGTATTTCGTTTCATCTCGAAGGCGG
GAATATGTCGAATCTGTGTCGACCATCTCCTTTGTGATCTCCTCTCCCCG
CTCCCTCTCTCCACCCTCCCCCCCGGCTCCCCCGCTTGACCCGGACTTCT
ATTTGCAGGGCCGCGGCGCGTCTTCAAGCCCTCAGCTTCGAGCACCCGGG
CGGATACTTGGAGAGTGACGAGTCTCTGCAGTCCCCGGCCAAGAAGCACC
AGAGGGACAAGGCAGACGCGCCGGCCGCCGCCGCCTCAGGCGTGGAAGGT
GTTGCGCGCAGGCGAGAAGCGTTTGGGGGTGAATACGTAGCGTTTATGTC
CGCCGCTCTGCGCCCCCACCCCCTCCACCCCTTCTCGCGTTCTCTCGCTG
TGAGTTCCTTGTTATGCCTTTTCCTGTCGTGGCTCATCACGACGCCTTTG
TTGCCGTCTCGCCCTCTCTCTCTCTCTCTCTCTCTCGCCCTCTCCCTTCG
ATCTCTTGAATCTCTGTTCAAGGTCGCTTTTTTTGTTGCTCCATCACTTC
GCCGGTGTTTTTCACGCCTGTCTTGCTCTCCATATCTCTGGGCGGTAAGT
TGGCTTTTCCTCAACTCGACTCTCTCATCCGTAGAAAGGGAGAAGAATCA
CGCTCGGAGGCAACGCGTGGTACGAACCCCCTCAACGGGTACAAAAAGCC
TCGTTCGTCGAACCTATTTTGCATTCGAAGAGGGTCCGTCACCGGCTCAT
TGTTGACCTTGGCGGGGCCCGTTCCTGATCCGGCTCAACAACCCAACCTC
GACAAGAACCAAGACCCGACCCTTCCAGCGTCATTTTCCACACGCTCGTG
CATCTGCCACGGTTTCTTTCACCGAAAACAGAATGCAATTTTTCCGAGAG
GGGGATTCGCTGCCGCCGCCGCCGTGCCAACAGCAGCAGCAGCAGTACCA
TCAACCTGTCGTCGGCAAGCCGTCGGATACCGATGACATAACAGCAGCAG
CAACGGCACCAACAGCAGCTGCTGTGGAGGTGGGGAAACAGAATTCCGTT
GGTTTGGTGGCGGCAGCAACGGGCACCGCTGCTGCACCGGGGACGTACTA
TCCCGCCGCGGCTTCTGCTGCTTCTGCTTCTGCTTCTCTCGCGAGGAACG
GCGGCGGATTACGACAGCAGGAAGGAGGGGGGCACGCTATTGGGTCGGGG
GGTTCCGTCGCGACCGAAAGGGAGAAGCGCACCCTGGTGGTTTATCCGCC
GGAGTGCCTCCTGCACATGTGAGGGCATTTCGTAGTATCAGCCAATCCAG
AACCCACACAAAGCCTCGTCTGCTGCCGGGACGTCGTTTGCGGTTCCGGA
CTCGGTTGCGGCAGCTTCACCCTGTTCTGTGTAGCCGTGATGCATCCATC
TTTTTGGAGCATACAAACGCCGTTTCTCGGATACAAATGCCCCTGCCGGC
ACGCAACGGCGGCCGATGCCTCCCCCTCCGCGGGGCATTCTTTTACAGCA
ACATTGGCAGGTGTACGCTGTAAATGACTTGCCTCATCCCTACCCCCCCT
CACCTGTGTTGCTGGCAACTGCCAGCGAGGAGGAGGCAGGGGAGAGCGTG
TACGGAGCCCCCAAGGTTTTTGCCTGGGGCGCAACATCACAAAATCCGTC
GGCCAAATGCGTTGAAAGCACTCCTCTTTTCTTTAGCTCAAGGCACCGCC
TGCGCCCTCCCCCCGACTTATCGATTAGTATGTGGTGGGTCGAAAGCAAG
CTCTATCCAAATTCTGAACATGTTTTGTGTTTCATTCTTCTGAACGTGGC
CCGATACCAGGTCTGCGTCGACTAATCTTGTCACTGTGTTGAATCAAGCC
GGGACATACTTGCGAGGCATGTTGTGCACCAGGAGGGGCGATGCCTAAGC
ACACATCTATTTCGCATTTTGCTTGCTCCCAACGGTTGATTGCACGTTGC
ACGACGCCACGTCGCAGGGCTGTCGAGGAGCACGAGAATCACCAGGAGAA
GCCCAAGCGGCTGGAGCTGTTGTGCGGAGATCGGGGCGCTCTCCGTAGGA
ACGCCTTTAAAGGTCGGGGCCGGTAGCCAGTCCTGTGAAGGCTGGGGCTC
CAAAATGGAAGCGCTATCTATCTTTGAGTGTCGGGTGCCATTTCGTTTTT
GGGACGGGTGGATAGATGAACGGATGGACGGCAGAGTGTTCGTGTTTGTG
ACGGGTTTCTTGCTGGCCGCGGGGCAGGGGTGCCGTGAAGTCAGAAGTGA
TCGCACACGCCCCTGCGCCGAACGGTTCCTCAAAAATGCCTCCTTCTGCC
CGTTGCTATTTTATGCAAACGTATTCATCCGCTCGCTTGCGTCCACTCGT
GGGGCATCTCAGGGCTGGAGTGGGCGGACCAATCATCGATCACCCCGGCT
CTCGTCACCGATTTGCTGAGGGTGCACGAGTACGACTACCTGCTGCACAT
ACAGGTACACATCGAATTTTCAGTGGGCGAAGGCTCTTCAAACTTCCGGA
ATTTCTCTCTCGCTGCTTGGGCACTCGTTTCTTGTTCCGTCTATTTGAAT
TTTGTTTGTTCAGGGTCGATATTTTCCTTCCGGTTCTTGTCGATGTTGGA
TCAGTCGCCAACCAATACTTGGCAGTCGATGTCTCCATCCCCGATGTCTC
CATCCCCTCCCCCCCCCCTCCTCCTCGATCCCCTCCCTCTTCTCCTCTCT
GGTTCGGCGTCCTGCGTACACCCTGATTTTATTTTCGGCTGATGTATCCC
CCGTTCTGCACATATTTTTTCTGTCACCCTGTGCGCCGATCGCCCGATCT
ACCCACGTGCCCCGACGTCCGAGAGACAGAGCCCCCCTCGTCCACGTCAT
CCTCACTCTCCCCGCCTTACCCTTGCTTCGCCAACAGTTACTTCACTGCT
TCCTTCGACCGATCGTTGGCCCAGTCTTTCGCCATGTTTATTTTTTTCTC
TCATGTTTTTTTTTTTTTTTTCTGCTATATTTTCTTCTTTCCGGCGGTGG
TTGGGGTTTCCAGGAACGATGCGCGGGAGCATCGCCGTCGAGCGTCCCGC
AACGGCCGCCCGGTGAATCAAGCACGACACCCCTGGGCGGCAAGAGCACG
GCGGTGGCGAGTTTTCGTAAAGTTTCCGAGGAGGGCGAGGCGGCGGCGGC
CAAGAGGCGGCGGCAGCAGCAGCGGGAGTTCGGTTCGAGGTTTGTGGCCG
ACGTGGGGTACGTGGACGTGGACACGCGAGTGTCGAGGGAGTCTTACGCG
GCGGCGACGATGGCCGCCGGTGCCGTCATCCTGGCGGTGAGTCGAGGGAG
GGGACGGGAGGGAAAGGGAGGGAGCGGGGAAAGAAAGTGAGAAGCGGGTG
GGGAAGGGATGGCAGGAGAGGGGAATGGAGGCGGACAGAGGGGGGAAGGT
GGGGGAGGAAGGGGAGGGGAAGAATAAGGACAAGGCTAGAGAGGCTTGGT
TGCACCCTCCATTGTCCCGGCTGCCGAGAACGATATCCATGGGCAGAAGG
CCGGCATGCTGTCCTATTTCGAAGGCTCTGTCTTGATTGGACCGCGAGGT
CCTAAGGTCAGGTCGATGATTGCGTATGGCCTCTGCTGTGTTGCTCTCCT
TCTTCATCTTCCTGTCTCTCCCTCTCCCTCCCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTAGACTATATGGTTCA
CGTTTTCGGTCTTGTTTCCGTGGCAACGTTTTCGATTTCAGATTTTACAG
GTTTGGCTGCGACGTTTGCCCTCGTTCCATGTTCGTTCCCGTGCTCCGTT
TCCCGCCTTCCGTCGTGCGTTTTGCGTCATCGCACCGCCCGGCCCAGGTG
GACCGAGTGGTGCAAGGTGAGAACCCGAACGCGTTCGTGGCAGTTCGCCC
GCCGGGACACCACGCCGGTCCATCGTGAGTTGGCTGCAGTCGCGTCTCAC
CCTGCGTTTTGTGGCGTTCGTTTCTGCATTTGGATGCATGCCGGAGAGCG
ACAAGTAGGTTGCGTTCTGTGTTTGGGTCGAATGGGCTGCCTGCCCGGTG
CACCTGCTAGAGTGCTTCAGTTTCAGCGTGTTGCGCGCTGCATGTATCTT
ATTTGCGTTATTTTTCAAGGACGCATGATGCGAATGGTACACCACTATGT
TTGCTTTCAGCACCGAATAAGGTGTCAATTGCGAAGAGCGTGAAGTGCGG
CTAGTGCTGGCGTTGGAAGATAAGTGCCTTCGTCGAAATTTGTGAAAACC
GTAGGCGCGGTAAAGCGTACTGCTGTATCCTGGATTCGAGCCACAGCAGT
TCACCGTGCACGGGTTGACGCGATGAGGTGTTGCGCGCATGCATTCCTCC
CCCAGGTCAGCCTTACTTCATTGAACCACAGAAATGACACGGGGTTCGTG
AAGTAAGTCCCGGGGTCCCGGTGACAATATATATCAAAACGACCCCCCCG
TTTTTTGTGATCCACCTCGCCGCCACCGCCGGTGGAGTGACGAGGTCTAC
GGAGAACGGCTTGGCCTTGTGGTCCGTCACCTTGGGTGCGTCCTTATCGT
TCCGCCAGAAAGTAGAAAAAAAAAAAATCCGTTCTACGCAAGACTTTCCG
CTCTCGTCCTGCTTCGTCCTTCCCGTTTCGTTTGATTACGTTGTCGTGCG
CGATGCTCTCGGATTTATTTGTCGCGTGTCGTTCGATTTTTCAGCGGGTC
TGTGCCGTCATCATCCTTCTGGAAGAACCCCGGGATGAACAGCAGCGGCT
TCTGCCTTATCAACAACGCGGCCGTCGGGGCGGCGTACGCCAGGTCGAGG
TGCGGCAAAAGCAGTAAAGGGGGAGAGGTgGGGGGGGAGAAAGATCAGGC
AAATATTAATAGAGACTGCGAGAGGCGAAGCGAAGCAGGCAGTCAAGTTT
TGGCGTGTGTGTTCGAGCAAAACGGTGCTTGTTGTGTCAAAACACATCCA
GCATGCGCCAAAGTGGGGGTCGTTGTGGCGCCTGTCTCTGTCAGAGCGCC
GCGGAAGCAGTACACGCACACCAGACGGTCGCGCTCTGCTAATGTTTCCT
GGCGATGCACCACCGGCCCGGAATGTACTTCTCTTTGACCGCGTGCATGA
CTCGGCGAGACAGACTCGGGGCTCATGGCACATTGACGCGTTCTACCGCG
GAGAGAGTGAAATGAGCCGCTCGTTTTGTTATGTTTTTGCGAGTAGTAAG
GCGGAGGGAGATCCGCCCGGCGTCATGCTGGATGGAAATGGAAAAACAAA
CTTGGAGAGCTTTTCGAGGAGAGGGGACAGTTCTGGCTGACCCGTGCTCC
TTTTTTTGTGTTTCGGTCTTGCTGTACTCATTGCGGAAGGTACGGGAGGT
CCGGCGAGGTGTCGCGAGTGGCGATCGTCGACATCGACATCCACCACGGC
AACGGCACGGAGGAGATCGTCAGGTGACGAGCAGCAGCAAGTAGCCGAGA
GGCAGAGGAAGCCCGCAGGTTTTCGATCTGACCCTGTACGAACCATGTCT
GGAATGCAATGCACCCGATTTGGCGGTGTCAAATAACATGTGTATGCGGT
CGCGGGGTGACCCGATCTTCGCTGCCCAAGCCCCTCTCCGAACACATCCG
GCTCGTACACACCTCAGCGGAGGAGCCGTTCGTGTATACGGCACACCCTA
GGGGCCGACATTTCCAGGTTTATTTGCTCTGCATTCCCCACCAAGATGCC
GACGCAGCATGAAGTGACTTCGGAGATCTCTCCATGAGATCGTTTCGAGC
GTCACCTACTTTTTACCCGCAACGGCCAATGTCACCGGATTTGTTCCCAG
CTCCGTCCTTGACTCGGCCCCGGCACTTGTCTTGCTGGGCGTCAATCGAG
CTTATTATGCCGTCCTCAATGGGGTAAGGAGGTACTCTCTATTTGCCGTC
GATTACGGTATACATTCTGTTGTCGCTACCGCCGCCGCCGCCGCCGCCGG
TCGCGGATTGTAGTCGGCGTTTTCACTCCGAGGGCGGCGCTTGAGATGAA
AATCCATGTACCTGCTGTTGTCTCGCTGCGTCCGTGGTTGGTGTGGAGTA
TGTGACGTACGACGCGCGACACTTGCAACCACCTTTTCATGTGAATTTTG
CGGATGTGCAATTATTCGCGAGTGCATGACTGAGCGCTGGCAGGCTAGCA
AGCATTTCGTTTTGAAAGACCCCCATCGTCTGTTTCTAAGATCAACCCAT
GGTGTATGCTGGCAAGCGTTTCCTCTTCACCGACCGATTATTGCCTTGGT
GCAACGGCAAGGCTGTTTGCTTCGCGAGCGTGGCTCCTTCGTTGACTTTC
GCCATCGTCTTACTCAACACGAGAAGGTGTCTGCGGCCGATGACGACGCG
GCTCCCCCTGCCGCCTAGCTGGCCACCCATGACCAAGACGGTGTACAAGC
CGTGGCTGGACGAGGAGGACGCGGACAACGTCCTGTTCGGGTCCGTAAGC
CTGCAGGACAAGGATCTCTTCTACCCGGCCTCAGGTTCGAAAGAACGGAA
CAATCAAATCGAGGAATTATAACGGTTTGATTGTAGTCCACCCGCTCTTT
TGTTGACACTCTCGTTGAGTCCGCACGAGTTGTCGGTTATTGTTGCTGTC
GTTCTTGACAGGGATCGGGATCTCTTCTACCCGGCATCGGGTTCGTCGGC
AGGTTGGTCGGTCCGCTCTTAGGAGGTTAAGGTTTCCGTCACCTGTTGTT
GGCGGTTGGTCCGCTCTTGTTAACATTTTTTGTCGTCTCAGCGACAACTT
GTTCCCTTGTCGGTCCAGGGTGCCGGTCTTCTGTTGCCGACAGTCCCTTG
GATGTGACATGTGTTCTCATAATTTTTATCCACTCTCCGGCAAATTGGCA
ATCACCTCCGAGATTGCACCCGCGTGATGCCCTTGCCGTCCAGCTCGCCC
ACGATGCCAGCACCACAATCAATCCTTGGTTTGGGATTGATCGCCAGGGA
GGGGCCGTCTCGATGACAACGTCAAACAAAAAACCCTTCCGCAACCCTCC
ATGCCTCTCCCTTACGATTCGAAAATGCAGCGGTCGTTACTCCTCGCCAG
TATCCGCCACAAGTTGGGAACAACCGCGCCGCCGATGTTCTGTTTCCCAG
GCCCCTCCTCACGCACGGCCCCCCCGCCCTTTGAGCGCCTGCTGTCCGTC
CCTCTCGACTTCCGTTTTTTTCGTGATCGCAAGAAAAAGCGACAACCTCA
TCGACCGCCACTGTCGTCGTCCGTTACTCCGCAGGCACGGAGGAGGAGCA
CTTCGACGAGAACACGAACATCGTGAACGTCTCCCTGTCAGTTCTGGGAC
CGCCGCCCGGGGACGAGCCGTAAGTTTTGCCGCTGCAACCCTCTGCCGCT
TACCAGCCCCCCCCCCTCCCCCCAAAGAAGCAGCCGTTTGATGCCGGCCT
GGGTGTATCTCTTGTTTGCACGTATGCCGTGTGCTTTGTACGACGGTGGG
GGATGAGGCAGGATTGTGTATTGCGCGGGGTGTCGAGCGGTGGATTGTGC
CCCTCTGAAGCTTACCCCCAGGGTAGACAACCTCCCGGAGTAGCGGCTGA
TTGCTGCCCGCCTGGGTGTATCTATCGTTTGCGCGTTTGCCTTGTGCTCC
TCACTACAACCGTGCGGGATGAGGCAGGACTGTGTGTTTGGACCGCTACC
CCTAGAGAAGTTTTTGTGTGCTGCAGTCCTTCCATCTATCGCGTTTTGTT
GGATTTGTCCGCGGAAAATCGCAGGAAGAAGCGCGCGCTGGCGAAGACAA
AGCTGGCCGAGTACACCACCAAGGCAGGAACCGAGTTCAAGCAAAAGTGT
CAGAGGGTGAGAGCCAGAGGCGTTCTTGCCTCGCCGGCCGGGAGTTGTAA
TCTCATGCTCCAATGCCGTTTCGTGCCGTGTTCTAAACTCCCTTCAGAGA
TATTGGAGAACGCGTCATTGTGGGGTTTGTAGGCGGTTGTTGCCGCCGCC
GCCGCCGTAGCAGCTACCCCTGCTCTGTCTACTCGGTCGCCTCATATTGC
TTTTGTTCATATTTCGTCTGTTTTATCTTTACCTCTCCCTGTCTCTCTCT
TTCTCTCCTTCCCTCTCTCTCTCTCGTTCCCTCCCTCTCTCGCTCTCTCC
CTCCCCCTCTCTCTGCTCCCTCTGCCGCTCTCTCCCTGGCTCTCTCTGTC
GCTGTCTGTCCCTGTCTCTCGATTTGTTTCTTCATAATTTGGTTAATTGT
TAAAAAATTCATTGTATCGTTTGTGCGACTGTGCAACTGGGCCGTTCGTG
CGGCATTGCTTTTTCAAGACTCTCCTGGCGAGGCTCAAGGACTTCAGCCC
AGACTTGCTCATCATCTCCGCCGGTGAGTAAAAAACAAACTAGATAAACG
CGACCGACACACAAGACGACTGGGAATGGACGTGACTCAAAACGACGTTC
CATACAGATCGCGCCCCGATCTACTCCTGCCCCGGTCCCGCGCTTGGAGA
GAGTCGGGGATGAAGGCACAGGACGCTGAGAACGGTTGGTCGCTTGAGAC
TTTTGTGAGTGTCACAATTTTTGCCCCTAATACTTGCCATCCACAGCCCT
TGGGAAGCAACCAAAGACAGACCAAGAGGCACTGAGCTGAAGACCCTCAA
GTATACACTGTTTGTCGGCCGTTGCCTCTGCCTGCTTCATTCCCATGCCG
ATTTGAACTCGATGTGCCCTCCAGGAGGTTTGTGAGTTTTCGTGGTTTGT
TCACCTACCGGCGTCAACGCCTCTGATCAAAAGAAACACAGGAGAGAACG
ACAGAGGCAACGATCGAGATGAGGAAAGCGATGTGGTGACCACGCCCCCC
TTTTTTCTTGTATCGCATTAATTCAAAGAGTTCGAAGGGCGCCTTGCCAC
CCATGCCATCTTGCCTGGACATCTGAACCGTGCTCGCACAGAAGGTTCCT
CTCCCTGAGGCCCCCACTCCCTTCCTCCCGCGGTGCTGACCGATAGTTAT
TATTACGAGAAGAGTCTCAGCCACCTCTTTCCCACTTGCATACACCCTAC
GCGCTATCCGCCGGCAAGAACGCAAGCGATGAAAAGTCGCTCACGCTGGG
ATTTGAACCCATGAAGTTGCCTGCTGGAAGGTTACGGGGATACCAAGTAG
ACCACCTTCCTGCCTCTGCTTTTTGCTTGTGGCTCTGCTTCATGTATGCA
TGCTTTTGAGTCTAAACTTCGCGCGTTTCTGTCATTTTGGGCAAAATCAT
GGCAACATGAATACGTGCCTCACCGTCGCTTCTTTTTTTTTCGATCGTTT
TGGAAAAACACAAAATTAAAGGCTTCGACGGGCACGTCGAGGACTACTAC
CACTACCTCTCGAACGAGACCTACGAGTGGATCACCACCTCCCTCGCTGG
CTGCTGTCCGTCGGGCCGTGTGGTGTCCGTGCTGGAGGGCGGCTACTCGC
TGGAGGCCAGGGTGTCTCGCGCGAAGGCGGCCCAGCAGGTGAAAACGCAA
TGGCATCGCCGCCTTGTACGACGCCTTGCATTTTAGTACAAGCCGTCCGC
ACGTCCTGCGGTTTGATTCAAGTAATTGGTCAATCGCCCGCAGCGGTGGC
AGGTGATTGGGTGTGTTGCCGAGATTTCCGCGGTCTGGATTTGAAAATCC
ATCGTCCCACCTCGGTGCTTTTGAACGCACCTGTCATGCGGTTGCGCGGG
TTTGGTGGTCGTTTGCTCGAATTCTCGTGCAAGTGTGTATCCCTCCATTC
CCCAACATCCACAATCCTGCTGTTTCCTTCTTCTCTGTATTTCTTTTGGA
TCTCCCTTCCCAGGCGCGAGCCAACGTCAAAAGAGCGGAGACCGCCGCAG
CGACTGCTGTGACGGCAGCGGCGGCGGCGGCATCGAGCGGCCCCAGCGGC
ACCTCTGGGGCAAAGCCGGCCCTGCGTGAACGCCGCAACCGCACCAGGGC
AGCTGCTTCTTCGTCGTCGGCTGCGAACGCCCACCCGGGCCCCGCCCTTC
CCATCCCTCCTCCTACCGCCGGCGCCGCCGCTGCTGCTGCTGCTCCTGCT
GTGATTCCGCCAGCGGCGGCGGACGTGTTGGTAGGGGCACCCCCGACGCC
GCCGTCGATCCCTGCTCTCCCCGTCGTGCGAACGGTGAGCACATTGTCGT
CTTTGTCCCTGTCGGGCGACCACACCTCGGGGAGCGTCTTGGGGGCCGTC
GCTAGGGATACTTCCGGCACGGGGGGGGCGGCGGGCCCTGGAGGGGGCGG
CTTCGACGCCAGCGGCGGCGGCAGAATGGAAAAGAAAGGTTCTCGGAAAA
ATCTCGCGGCGGCGGCGGCGGCCGCGGCACGGGAGGAAGAGGATGCGGCG
CTGCAACCGGGGACGGCGGCTTAGTTTGTGGTGTGGTGTCGCACGTATCG
GCGCTCATGCGGCTGGCCTCCTCGGGGCAAGGGTATCGCCAGCAGCAGCA
GCACCCCCACCCACCCCACCACCAGCACAAACCGGCCCACGCGGCGGCTG
TGTCGTCGGCTTCTTTCCCTCCGGGTGCCGCGCCCCTCGGGAACAAGGGT
AGCAATAAAATCTTTCCGGCGAATCGAACTGGGGCGGAGATCGGCGGCGG
CGACGGTGGCGTGGCCGTGAAAGTCGAGGCGACCGGGGCCCTGTAGAATC
TCACTCGACAAAAACGAGCGGGTGCTTCTTTTCACAGTCCAAGATAGTAC
TACGTTTTCCTGTCCTACTCTGATGCACGGCGGTCTGGAGGAGATTGCCT
GAATTGTGATTGGTAGTATGCTTGTGGTTGGTTTTTGCTTCGCGGACGGC
CGGGCTCTCTGCGCCGTGTGCACATTACGTTAGATGACTTTGAAAAACAT
GTGTATTGCAGTTGTTCGCGAACAGGGTTTTGGTGGGTAGGATCGATCAA
TTTTGTCTGTCCGCAATGGCGTTTTCGTTTGCGTTACGTCTGTCGTGTCT
TGGGACGGTGATGGGAGGCCTCGTCGGCGCACGAGGTGTTCTCCGTCGTC
GAACGTTTCCCCTCGTGTACCCACCTGCAGTCTTTCTAGCCGCAAGTGGG
ACGTGTGTCATCGATAGCGGCGAGAGGAGGTGCCCACAGTTTGCTTATTG
GCCAACTTTTCGGAAGGATATTTGAAAATTCCGCGCGTTCCACCGTTGCT
GGCCTCGTAGATTTCGGAGCCACCATTATCCTTGTCGCCACTGGTCGATG
TGTTGAGTGAAAGAACGTTGAAAATTGGAAGTTCAAAAATTTCTTTCGCC
CCAAGTGCGAAGTTTGTTGCCCCACAAATCCACACCGTAGTTTTGCTGCT
GTGGCTCCTTGAAGGCGTGTGTGCCTGCATGAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:2560693..2574325+

>mRNA_P-fluviatile_contig1.200.1 ID=mRNA_P-fluviatile_contig1.200.1|Name=mRNA_P-fluviatile_contig1.200.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5760bp|location=Sequence derived from alignment at P-fluviatile_contig1:2560693..2574325+ (Porterinema fluviatile SAG_2381)
ATGGGGCCATCCCCGCCCCGCCACCGCCGGTCGTCTTCCCCCGCCCGCCG
GGCGTCCTCTCCGCGATCCCGTCGCAGCTCGTCGCCGCCGCGGTCGTGGT
CGCCGTCGCTGCCGCCGCCTTCTCTTCTCGCCCCTCCTTCCGTCGTCTAC
GCCGCGGCCGACCTCAACCGGGGGCCGGCCCACGTCGTGACCTCGACAAC
ACCAATCGCCGGCGGCGGCGAGACCTTGACCGATGTGACCGGCGAGGCTG
CCGGCAGGATCGACGACTGGATGAGCCAGAAGCGGCGGGAATCGTCGTGC
GCCGGCAACCGAAGCGGTGGCAACGGCGGCGGTGCCGGTGACCGGACGGA
GGCGACGGACCCGATGGATACGGAGAACGAGGGCGGCGAAGACGGGGGGC
GGGGCGGCGGAGAGATTGTCAGGGACATCACGTCGTTTTCGCCGTACGCG
GCCCGCCTCGGGGGCGGAAACCGCCCAGGGGATGACGTGGGCAGATGGGG
CCATCCCCGCCCCGCCACCGCCGGTCGTCTTCCCCCGCCCGCCGGGCGTC
CTCTCCGCGATCCCGTCGCAGCTCGTCGCCGCCGCGGTCGTGGTCGCCGT
CGCTGCCGCCGCCTTCTCTTCTCGCCCCTCCTTCCGTCGTCTACGCCGCG
GCCGACCTCAACCGGGGGCCGGCCCACGTCGTGACCTCGACAACACCAAT
CGCCGGCGGCGGCGAGACCTTGACCGATGTGACCGGCGAGGCTGCCGGCA
GGATCGACGACTGGATGAGCCAGAAGCGGCGGGAATCGTCGTGCGCCGGC
AACCGAAGCGGTGGCAACGGCGGCGGTGCCGGTGACCGGACGGAGGCGAC
GGACCCGATGGATACGGAGAACGAGGGCGGCGAAGACGGGGGGCGGGGCG
GCGGAGAGATTGTCAGGGACATCACGTCGTTTTCGCCGTACGCGGCCCGC
CTCGGGGGCGGAAACCGCCCAGGGGATGACGTGGGCAGGGCCGCGGCGCG
TCTTCAAGCCCTCAGCTTCGAGCACCCGGGCGGATACTTGGAGAGTGACG
AGTCTCTGCAGTCCCCGGCCAAGAAGCACCAGAGGGACAAGGCAGACGCG
CCGGCCGCCGCCGCCTCAGGCGTGGAAGGTGTTGCGCGCAGGCGAGAAGC
GGCCGCGGCGCGTCTTCAAGCCCTCAGCTTCGAGCACCCGGGCGGATACT
TGGAGAGTGACGAGTCTCTGCAGTCCCCGGCCAAGAAGCACCAGAGGGAC
AAGGCAGACGCGCCGGCCGCCGCCGCCTCAGGCGTGGAAGGTGTTGCGCG
CAGGCGAGAAGCAATGCAATTTTTCCGAGAGGGGGATTCGCTGCCGCCGC
CGCCGTGCCAACAGCAGCAGCAGCAGTACCATCAACCTGTCGTCGGCAAG
CCGTCGGATACCGATGACATAACAGCAGCAGCAACGGCACCAACAGCAGC
TGCTGTGGAGGTGGGGAAACAGAATTCCGTTGGTTTGGTGGCGGCAGCAA
CGGGCACCGCTGCTGCACCGGGGACGTACTATCCCGCCGCGGCTTCTGCT
GCTTCTGCTTCTGCTTCTCTCGCGAGGAACGGCGGCGGATTACGACAGCA
GGAAGGAGGGGGGCACGCTATTGGGTCGGGGGGTTCCGTCGCGACCGAAA
GGGAGAAGCGCACCCTGGTGGTTTATCCGCCGGAGTGCCTCCTGCACATA
ATGCAATTTTTCCGAGAGGGGGATTCGCTGCCGCCGCCGCCGTGCCAACA
GCAGCAGCAGCAGTACCATCAACCTGTCGTCGGCAAGCCGTCGGATACCG
ATGACATAACAGCAGCAGCAACGGCACCAACAGCAGCTGCTGTGGAGGTG
GGGAAACAGAATTCCGTTGGTTTGGTGGCGGCAGCAACGGGCACCGCTGC
TGCACCGGGGACGTACTATCCCGCCGCGGCTTCTGCTGCTTCTGCTTCTG
CTTCTCTCGCGAGGAACGGCGGCGGATTACGACAGCAGGAAGGAGGGGGG
CACGCTATTGGGTCGGGGGGTTCCGTCGCGACCGAAAGGGAGAAGCGCAC
CCTGGTGGTTTATCCGCCGGAGTGCCTCCTGCACATGGCTGTCGAGGAGC
ACGAGAATCACCAGGAGAAGCCCAAGCGGCTGGAGCTGTTGTGCGGAGAT
CGGGGCGCTCTCCGTAGGAACGCCTTTAAAGGGCTGTCGAGGAGCACGAG
AATCACCAGGAGAAGCCCAAGCGGCTGGAGCTGTTGTGCGGAGATCGGGG
CGCTCTCCGTAGGAACGCCTTTAAAGGGCTGGAGTGGGCGGACCAATCAT
CGATCACCCCGGCTCTCGTCACCGATTTGCTGAGGGTGCACGAGTACGAC
TACCTGCTGCACATACAGGGCTGGAGTGGGCGGACCAATCATCGATCACC
CCGGCTCTCGTCACCGATTTGCTGAGGGTGCACGAGTACGACTACCTGCT
GCACATACAGGAACGATGCGCGGGAGCATCGCCGTCGAGCGTCCCGCAAC
GGCCGCCCGGTGAATCAAGCACGACACCCCTGGGCGGCAAGAGCACGGCG
GTGGCGAGTTTTCGTAAAGTTTCCGAGGAGGGCGAGGCGGCGGCGGCCAA
GAGGCGGCGGCAGCAGCAGCGGGAGTTCGGTTCGAGGTTTGTGGCCGACG
TGGGGTACGTGGACGTGGACACGCGAGTGTCGAGGGAGTCTTACGCGGCG
GCGACGATGGCCGCCGGTGCCGTCATCCTGGCGGAACGATGCGCGGGAGC
ATCGCCGTCGAGCGTCCCGCAACGGCCGCCCGGTGAATCAAGCACGACAC
CCCTGGGCGGCAAGAGCACGGCGGTGGCGAGTTTTCGTAAAGTTTCCGAG
GAGGGCGAGGCGGCGGCGGCCAAGAGGCGGCGGCAGCAGCAGCGGGAGTT
CGGTTCGAGGTTTGTGGCCGACGTGGGGTACGTGGACGTGGACACGCGAG
TGTCGAGGGAGTCTTACGCGGCGGCGACGATGGCCGCCGGTGCCGTCATC
CTGGCGGTGGACCGAGTGGTGCAAGGTGAGAACCCGAACGCGTTCGTGGC
AGTTCGCCCGCCGGGACACCACGCCGGTCCATCGTGGACCGAGTGGTGCA
AGGTGAGAACCCGAACGCGTTCGTGGCAGTTCGCCCGCCGGGACACCACG
CCGGTCCATCCGGGTCTGTGCCGTCATCATCCTTCTGGAAGAACCCCGGG
ATGAACAGCAGCGGCTTCTGCCTTATCAACAACGCGGCCGTCGGGGCGGC
GTACGCCAGGTCGAGCGGGTCTGTGCCGTCATCATCCTTCTGGAAGAACC
CCGGGATGAACAGCAGCGGCTTCTGCCTTATCAACAACGCGGCCGTCGGG
GCGGCGTACGCCAGGTCGAGGTACGGGAGGTCCGGCGAGGTGTCGCGAGT
GGCGATCGTCGACATCGACATCCACCACGGCAACGGCACGGAGGAGATCG
TCAGGTACGGGAGGTCCGGCGAGGTGTCGCGAGTGGCGATCGTCGACATC
GACATCCACCACGGCAACGGCACGGAGGAGATCGTCAGAAGGTGTCTGCG
GCCGATGACGACGCGGCTCCCCCTGCCGCCTAGCTGGCCACCCATGACCA
AGACGGTGTACAAGCCGTGGCTGGACGAGGAGGACGCGGACAACGTCCTG
TTCGGGTCCGTAAGCCTGCAGGACAAGGATCTCTTCTACCCGGCCTCAGA
AGGTGTCTGCGGCCGATGACGACGCGGCTCCCCCTGCCGCCTAGCTGGCC
ACCCATGACCAAGACGGTGTACAAGCCGTGGCTGGACGAGGAGGACGCGG
ACAACGTCCTGTTCGGGTCCGTAAGCCTGCAGGACAAGGATCTCTTCTAC
CCGGCCTCAGGCACGGAGGAGGAGCACTTCGACGAGAACACGAACATCGT
GAACGTCTCCCTGTCAGTTCTGGGACCGCCGCCCGGGGACGAGCCGCACG
GAGGAGGAGCACTTCGACGAGAACACGAACATCGTGAACGTCTCCCTGTC
AGTTCTGGGACCGCCGCCCGGGGACGAGCCGAAGAAGCGCGCGCTGGCGA
AGACAAAGCTGGCCGAGTACACCACCAAGGCAGGAACCGAGTTCAAGCAA
AAGTGTCAGAGGGAAGAAGCGCGCGCTGGCGAAGACAAAGCTGGCCGAGT
ACACCACCAAGGCAGGAACCGAGTTCAAGCAAAAGTGTCAGAGGACTCTC
CTGGCGAGGCTCAAGGACTTCAGCCCAGACTTGCTCATCATCTCCGCCGA
CTCTCCTGGCGAGGCTCAAGGACTTCAGCCCAGACTTGCTCATCATCTCC
GCCGGCTTCGACGGGCACGTCGAGGACTACTACCACTACCTCTCGAACGA
GACCTACGAGTGGATCACCACCTCCCTCGCTGGCTGCTGTCCGTCGGGCC
GTGTGGTGTCCGTGCTGGAGGGCGGCTACTCGCTGGAGGCCAGGGTGTCT
CGCGCGAAGGCGGCCCAGCAGGCTTCGACGGGCACGTCGAGGACTACTAC
CACTACCTCTCGAACGAGACCTACGAGTGGATCACCACCTCCCTCGCTGG
CTGCTGTCCGTCGGGCCGTGTGGTGTCCGTGCTGGAGGGCGGCTACTCGC
TGGAGGCCAGGGTGTCTCGCGCGAAGGCGGCCCAGCAGGCGCGAGCCAAC
GTCAAAAGAGCGGAGACCGCCGCAGCGACTGCTGTGACGGCAGCGGCGGC
GGCGGCATCGAGCGGCCCCAGCGGCACCTCTGGGGCAAAGCCGGCCCTGC
GTGAACGCCGCAACCGCACCAGGGCAGCTGCTTCTTCGTCGTCGGCTGCG
AACGCCCACCCGGGCCCCGCCCTTCCCATCCCTCCTCCTACCGCCGGCGC
CGCCGCTGCTGCTGCTGCTCCTGCTGTGATTCCGCCAGCGGCGGCGGACG
TGTTGGTAGGGGCACCCCCGACGCCGCCGTCGATCCCTGCTCTCCCCGTC
GTGCGAACGGTGAGCACATTGTCGTCTTTGTCCCTGTCGGGCGACCACAC
CTCGGGGAGCGTCTTGGGGGCCGTCGCTAGGGATACTTCCGGCACGGGGG
GGGCGGCGGGCCCTGGAGGGGGCGGCTTCGACGCCAGCGGCGGCGGCAGA
ATGGAAAAGAAAGGTTCTCGGAAAAATCTCGCGGCGGCGGCGGCGGCCGC
GGCACGGGAGGAAGAGGATGCGGCGCTGCAACCGGGGACGGCGGCTTAGG
CGCGAGCCAACGTCAAAAGAGCGGAGACCGCCGCAGCGACTGCTGTGACG
GCAGCGGCGGCGGCGGCATCGAGCGGCCCCAGCGGCACCTCTGGGGCAAA
GCCGGCCCTGCGTGAACGCCGCAACCGCACCAGGGCAGCTGCTTCTTCGT
CGTCGGCTGCGAACGCCCACCCGGGCCCCGCCCTTCCCATCCCTCCTCCT
ACCGCCGGCGCCGCCGCTGCTGCTGCTGCTCCTGCTGTGATTCCGCCAGC
GGCGGCGGACGTGTTGGTAGGGGCACCCCCGACGCCGCCGTCGATCCCTG
CTCTCCCCGTCGTGCGAACGGTGAGCACATTGTCGTCTTTGTCCCTGTCG
GGCGACCACACCTCGGGGAGCGTCTTGGGGGCCGTCGCTAGGGATACTTC
CGGCACGGGGGGGGCGGCGGGCCCTGGAGGGGGCGGCTTCGACGCCAGCG
GCGGCGGCAGAATGGAAAAGAAAGGTTCTCGGAAAAATCTCGCGGCGGCG
GCGGCGGCCGCGGCACGGGAGGAAGAGGATGCGGCGCTGCAACCGGGGAC
GGCGGCTTAG
back to top