prot_P-fluviatile_contig16.2734.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig16.2734.1
Unique Nameprot_P-fluviatile_contig16.2734.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length448
Homology
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BLAST of mRNA_P-fluviatile_contig16.2734.1 vs. uniprot
Match: A0A6H5L2K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K1_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.840e-26
Identity = 87/185 (47.03%), Postives = 109/185 (58.92%), Query Frame = 0 
Query:    1 MSALNILKLLFLFDASG---------AGGNGDGSRTHHSLRGRASTEGYNAFGAA-AAARPRRPSEPACRPPP--PPQARVRFSHQIRVILVASRVEMLPVKADVWWGQQDYISFRRAYLTAAREERETHRALERQRRAAAQVLPQEGESKTPLESESNNPVSAPSTMVATAATAPESAGKRSGK 173
            +SALN++K LF FDASG         AGG G         R R++TEG + F A  AAARPRRPSEP CRPPP  P    VRFS+QIRV+LVASR+E+  +K D+WWG++DY  FRRAY  AAREE+E+   +           P      TP + E + P S+P   VAT+ T   SAG  S +
Sbjct:  177 VSALNLVKFLFFFDASGIEDGRTRRDAGGFGGWGSXXXXGRDRSATEGCHPFAATPAAARPRRPSEPGCRPPPSLPMPKAVRFSNQIRVVLVASRLELSSMKTDIWWGERDYCDFRRAYFKAAREEKESDGEV---------TPPSRAGQGTPGQDEFDRPGSSP---VATSPTTATSAGLSSSR 349
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BLAST of mRNA_P-fluviatile_contig16.2734.1 vs. uniprot
Match: D8LD92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD92_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 9.460e-13
Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 0 
Query:   69 VRFSHQIRVILVASRVEMLPVKADVWWGQQDYISFRRAYLTAAREERETHRALERQRRAAAQVLPQEGESKTPLESESNNPVSAPSTMVATAATAPESAGKRSGKLAPSAA 179
            VRFS+QIRVILVASR+E+  VK D+WWG++DY  FRRAY  AAREE+E  R +  Q RA       +G   TP   E + P S+P   VAT+ T   SAG  S +   +AA
Sbjct:    5 VRFSNQIRVILVASRLELSSVKTDIWWGERDYCDFRRAYFKAAREEKENDREVTSQSRAG------QG---TPGRDEFDRPGSSP---VATSPTTATSAGHPSSRNGSAAA 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2K1_9PHAE1.840e-2647.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD92_ECTSI9.460e-1349.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..447
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.647

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:1287865..1289567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2734.1mRNA_P-fluviatile_contig16.2734.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig16 1287657..1293210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig16.2734.1 ID=prot_P-fluviatile_contig16.2734.1|Name=mRNA_P-fluviatile_contig16.2734.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=448bp
MSALNILKLLFLFDASGAGGNGDGSRTHHSLRGRASTEGYNAFGAAAAAR
PRRPSEPACRPPPPPQARVRFSHQIRVILVASRVEMLPVKADVWWGQQDY
ISFRRAYLTAAREERETHRALERQRRAAAQVLPQEGESKTPLESESNNPV
SAPSTMVATAATAPESAGKRSGKLAPSAAPCRGGKDGDAAGDLPRSCGDS
SSSGGPDCGRGDKLVSPAQEGPLGPPPPPFPPFHDDEEYRPPAAQHGGDA
GNGAAEAESLLPDGGPALAAAATSADGSVAAVEELAPAAGGGEKHASNGE
GAAERPAETAECAAASSSLPKVLKKPVGTVESVVVARGLPGLSPCASMVE
TSATAAGEVEARRLAGNPAELVAARTSPRANGGGEAGGGVDVGNDRSGAG
GKTWLPSMKEPAAMLETEMDLRLDPRTGGRIPLQFLGDAPIRRVASF*
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