mRNA_P-fluviatile_contig16.2692.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: D7FHG8_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG8_ECTSI) HSP 1 Score: 183 bits (464), Expect = 2.280e-55 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RKVISKPLIKSSDMP E+VQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIY+FYGQIGVLTFKC
Sbjct: 43 RKVISKPLIKSSDMPPEIVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYIFYGQIGVLTFKC 134
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A836CH10_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH10_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.770e-47 Identity = 72/92 (78.26%), Postives = 87/92 (94.57%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK++SKP++KS+DM EM EA+E++TM+VDKFINVKNYEAAAQLIKNS+DKKFGASWHCAIGEGFGFEITYQ+RNMIY++YGQ+GVL +KC
Sbjct: 15 RKLVSKPVVKSADMSPEMSSEAIEVMTMAVDKFINVKNYEAAAQLIKNSLDKKFGASWHCAIGEGFGFEITYQKRNMIYMYYGQLGVLAYKC 106
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A7S2FKD5_9STRA (Dynein light chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKD5_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.110e-37 Identity = 57/93 (61.29%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 1 RKVISKPLIKSSDM-PQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
+K+I KP++K D PQE VQEA+E+ TM++DKFI+ K+Y+ AA+ IK+ MDKKFG WHCAIGEGFGF++TYQQ+NM+Y++YGQ+G+L +KC
Sbjct: 15 KKLIEKPIVKVCDFAPQECVQEAIEVTTMAMDKFISKKDYDGAAKAIKDQMDKKFGTLWHCAIGEGFGFDVTYQQKNMMYIYYGQVGILIYKC 107
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A067BR93_SAPPC (Dynein light chain n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR93_SAPPC) HSP 1 Score: 132 bits (333), Expect = 6.310e-36 Identity = 58/92 (63.04%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+ S+P IK +DM E+ E VEI+TM+VDK + +KNYEAAAQLIK SMDKKFG+ WHC IGEG+GF+I+YQQR+M+Y++ G+IG+L +KC
Sbjct: 19 RKISSRPFIKHNDMTAEVCTETVEIITMAVDKHVPLKNYEAAAQLIKQSMDKKFGSFWHCFIGEGYGFDISYQQRHMLYMYVGEIGILVYKC 110
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: G4YEJ5_PHYSP (Dynein light chain n=22 Tax=Oomycota TaxID=4762 RepID=G4YEJ5_PHYSP) HSP 1 Score: 131 bits (330), Expect = 1.780e-35 Identity = 58/92 (63.04%), Postives = 76/92 (82.61%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+ S+P +K +DM E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC IGEG+GF+I+YQQR+M+Y++ G IGVL +KC
Sbjct: 19 RKISSRPHLKHNDMTAEVCTETIEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGDIGVLVYKC 110
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A8J2SIE6_9STRA (Dynein light chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIE6_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.180e-35 Identity = 55/93 (59.14%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 1 RKVISKPLIKSSDM-PQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
+KV+SKP+++S DM P E EAVE+++M+VDK ++ NYEA +++K +MD+K+G WHCAIGEGFGF++TYQQ NMIYV+YG+IG+L FKC
Sbjct: 19 QKVVSKPVVQSCDMVPAEQANEAVEVISMAVDKHVSTGNYEAMCKIVKETMDRKYGPQWHCAIGEGFGFDVTYQQPNMIYVYYGKIGILLFKC 111
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A7S3JUA7_9STRA (Dynein light chain n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUA7_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.320e-35 Identity = 58/93 (62.37%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 1 RKVISKPLIKSSDM-PQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+++KP++ S DM PQEM + EI+TM+VDK+ NYEA +++IK +MDKK+G WHCAIGEGFGF+ITYQQ NMIYV+YG+IGVL +KC
Sbjct: 19 RKIMAKPIVASCDMVPQEMSTDTTEIITMAVDKYTTNGNYEAMSKMIKEAMDKKYGPQWHCAIGEGFGFDITYQQPNMIYVYYGKIGVLLYKC 111
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A8K1FE69_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE69_PYTOL) HSP 1 Score: 130 bits (326), Expect = 7.320e-35 Identity = 55/92 (59.78%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+ S+P +K +DM E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC +GEG+GF+++YQQR+M++++ G+IGVL +KC
Sbjct: 20 RKISSRPHLKHNDMTAEVCTETMEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFVGEGYGFDVSYQQRHMLFIYVGEIGVLVYKC 111
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: D0NDR6_PHYIT (Dynein light chain n=5 Tax=Phytophthora TaxID=4783 RepID=D0NDR6_PHYIT) HSP 1 Score: 129 bits (325), Expect = 1.000e-34 Identity = 56/92 (60.87%), Postives = 76/92 (82.61%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+ S+P +K +DM E+ E +EI+TM+ DK + +KNYE AAQLIK SMDKKFG+SWHC IGEG+GF+I+YQQR+M+Y++ G+IGVL +KC
Sbjct: 19 RKISSRPHLKHNDMTAEVCTETIEIITMACDKHVPMKNYETAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGEIGVLVYKC 110
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Match: A0A2D4CBJ0_PYTIN (Dynein light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBJ0_PYTIN) HSP 1 Score: 129 bits (325), Expect = 1.030e-34 Identity = 56/92 (60.87%), Postives = 76/92 (82.61%), Query Frame = 1
Query: 1 RKVISKPLIKSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 276
RK+ SKP +K +DM E+ E +EI+TM+ DK + +KNYEAAAQLIK SMDKKFGASWHC +GEG+GF+++YQQR+M++++ G IGVL +KC
Sbjct: 20 RKISSKPHLKHNDMTAEVCTETMEIITMACDKHVPLKNYEAAAQLIKQSMDKKFGASWHCFVGEGYGFDVSYQQRHMLFIYVGXIGVLIYKC 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2692.1 >prot_P-fluviatile_contig16.2692.1 ID=prot_P-fluviatile_contig16.2692.1|Name=mRNA_P-fluviatile_contig16.2692.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=80bp MPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGback to top mRNA from alignment at P-fluviatile_contig16:904038..912067- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2692.1 ID=mRNA_P-fluviatile_contig16.2692.1|Name=mRNA_P-fluviatile_contig16.2692.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8030bp|location=Sequence derived from alignment at P-fluviatile_contig16:904038..912067- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:904038..912067- >mRNA_P-fluviatile_contig16.2692.1 ID=mRNA_P-fluviatile_contig16.2692.1|Name=mRNA_P-fluviatile_contig16.2692.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=480bp|location=Sequence derived from alignment at P-fluviatile_contig16:904038..912067- (Porterinema fluviatile SAG_2381)back to top |