mRNA_P-fluviatile_contig1.172.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Match: D8LN63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN63_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.010e-86 Identity = 172/208 (82.69%), Postives = 181/208 (87.02%), Query Frame = 1
Query: 148 VSEELASKPVALECPRTGETLVCYAERIAVVGGERYLVAFPKDPAVAIAFDENGEVSPVPNDDPIMDELFPLAAACVADLGPGVTLLRTPTTLTVSGLNELVEATGTEDGADGESDGSAKTEGEELXXXXXXXXXXXXXXXXXXXXXXXVELLGEFLLEGEEFLIVRFLEPILILAKEQAPGKYLLIDEEEEQDTIPVVDEMLCADTS 771
VS+ELASKPVAL CP+TG+ LVCYAERIAVVGGERYLVAFPKDPAVAIAFDENGEVSPVPNDDPIMDELFPLA ACVADLGPGVTLLRTPTTLTV GLNELV+ + D E++G E XXXXXXXXXXXXXXXXXXXXXX VELLGEFLLEGEEFLIVRFLEPILILAKE PG YLLIDEEEEQD IP+VDEMLC D +
Sbjct: 14 VSDELASKPVALGCPKTGKELVCYAERIAVVGGERYLVAFPKDPAVAIAFDENGEVSPVPNDDPIMDELFPLAEACVADLGPGVTLLRTPTTLTVQGLNELVD-----EAKDREAEGG-DPEXXXXXXXXXXXXXXXXXXXXXXXXXXEVELLGEFLLEGEEFLIVRFLEPILILAKEHTPGNYLLIDEEEEQDAIPLVDEMLCGDAT 215
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Match: A0A836CAA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA3_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.010e-26 Identity = 76/217 (35.02%), Postives = 115/217 (53.00%), Query Frame = 1
Query: 148 VSEELASKPVALECPRTGETLVCYAERIAVVGGERYLVAFPKDPAVAIAFDENGEVSPVPNDDPIMDELFPLAAACVADLGPGVTLLRTPTTLTVSGLN-----ELVEATGTEDGADGESDGSAKTEGEELXXXXXXXXXXXXXXXXXXXXXXXVELLGEFLLEGEEFLIVRFLEPILILAKEQAPGK----YLLIDEEEEQDTIPVVDEMLCADTS 771
+ EE S+ P T + CYAE A + G RY+V FP D AVAIA +++G++ PVP DD +MD LFP+ + + G + L RTP TLT+SGL + + TG ++G D +++ VEL+ E + GE+FL+V+FL+P+L++AKE GK Y L+D +E++ +V+EML +TS
Sbjct: 60 IPEERLSEVFRFFDPETSTVIDCYAENFAEIDGARYVVGFPVDDAVAIAMEQDGDIMPVPVDDELMDTLFPVLQKDLEEAGAELVLKRTPVTLTLSGLEAYDDEDREDLTGDDEGGDADNE--------------------------------DVELISELDINGEKFLLVKFLDPVLMVAKE-VKGKGEVTYELLDADEDERVTALVEEMLTEETS 243
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Match: A0A7S1YW68_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW68_TRICV) HSP 1 Score: 70.1 bits (170), Expect = 5.210e-10 Identity = 71/201 (35.32%), Postives = 108/201 (53.73%), Query Frame = 1
Query: 172 PVALECPRTGETLVCYAERIAVVGGERYLVAFPKDPAVAIAFDENGE-VSPVPNDDPIMDELFPLAAACVAD-LGPGVTLLRTPTTLTVSGLNELVEATGTEDGADGESDGSAKTEGEELXXXXXXXXXXXXXXXXXXXXXXXVELLGEFLLEGEEFLIVRFLEPILILAKE--QAPGKYLLIDEEEEQDTIPVVDEMLCA 762
P+ R + CYA+ IA +GG Y + P D +VA+ + GE + PV D +MD++FP+A + V + G + L RTP TLT+ G E + XXXXXXXXXXXXXXXX VE+L F +G EF +VR L+P+L++ KE ++P + +L+ +E + +P+++EM +
Sbjct: 87 PIPFVDERGASFIECYADSIATIGGATYTIGSPCDCSVALTYFGGGEKLMPVELDSELMDDVFPVAESIVEEEFGDELGLQRTPQTLTLVGELEAEDX--------------------------XXXXXXXXXXXXXXXXEEEVEILLSFEHKGMEFHMVRLLDPVLLVGKEDPESPDRRILLTPKESDEVMPLLEEMFLS 261
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Match: B8C1Z8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1Z8_THAPS) HSP 1 Score: 65.9 bits (159), Expect = 1.450e-8 Identity = 72/183 (39.34%), Postives = 99/183 (54.10%), Query Frame = 1
Query: 214 CYAERIAVVGGERYLVAFPKDPAVAIAFDENGE-VSPVPNDDPIMDELFPLAAACVAD-LGPGVTLLRTPTTLTVSGLNELVEATGTEDGADGESDGSAKTEGEELXXXXXXXXXXXXXXXXXXXXXXXVELLGEFLLEGEEFLIVRFLEPILILAKEQAPGKYLLIDEEEEQDTIPVVDEML 756
CY + A V Y + P D AVA+ + EN E + P+ DDP+MD++FP+A + D G + LLRTP TLT+ G EL E XXXXXXXXXXXXXXXXXXXVE+L F +G E+ +VR L+P+L++ K +L+ EE +P +++M
Sbjct: 100 CYVDSYATVDQVEYTIGSPCDYAVALCYFENDEQLVPIELDDPLMDDIFPVAEGIIEDEFGEELVLLRTPQTLTLVG--ELEE------------------------NDDXXXXXXXXXXXXXXXXXXXVEILVSFEEDGREYHLVRLLDPVLLVGKGGNENTRILLSPEESDIVMPKLEQMF 256
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Match: A0A7S2QZU2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZU2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.870e-8 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 1
Query: 202 ETLVCYAERIAVVGGERYLVAFPKDPAVAIAF-DENGEVSPVPNDDPIMDELFPLAAACVAD-LGPGVTLLRTPTTLTVSG-LNELVEATGTEDGADGESDGSAKTEGEELXXXXXXXXXXXXXXXXXXXXXXXVELLGEFLLEGEEFLIVRFLEPILILAKEQAPG--KYLLIDEEEEQDTIPVVDEML 756
E + CYA+ IAVV G Y V P D VA+ F D ++ P+ D+ +MD++FPLA + V + G + L RT TLT+ G L++ E XXXXXXXXXXXXXXXXVE++ F +G E+ +VR L+P+L++AK K +L+ EEE +P+++++
Sbjct: 86 EFIECYADSIAVVNGIEYTVGTPCDYPVALCFFDNEDQLIPIELDEELMDDIFPLAESIVEEEFGEELNLQRTSQTLTLMGELDDEEEX-----------------------------XXXXXXXXXXXXXXXXVEIMISFEHKGREYSLVRLLDPVLLVAKNDPENSTKRILLTEEESNKVMPILEDLF 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.172.1 >prot_P-fluviatile_contig1.172.1 ID=prot_P-fluviatile_contig1.172.1|Name=mRNA_P-fluviatile_contig1.172.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp MKRKVKDSLEEVSEELASKPVALECPRTGETLVCYAERIAVVGGERYLVAback to top mRNA from alignment at P-fluviatile_contig1:2223128..2227706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.172.1 ID=mRNA_P-fluviatile_contig1.172.1|Name=mRNA_P-fluviatile_contig1.172.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4579bp|location=Sequence derived from alignment at P-fluviatile_contig1:2223128..2227706+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2223128..2227706+ >mRNA_P-fluviatile_contig1.172.1 ID=mRNA_P-fluviatile_contig1.172.1|Name=mRNA_P-fluviatile_contig1.172.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1326bp|location=Sequence derived from alignment at P-fluviatile_contig1:2223128..2227706+ (Porterinema fluviatile SAG_2381)back to top |