prot_P-fluviatile_contig15.2581.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2581.1
Unique Nameprot_P-fluviatile_contig15.2581.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length125
Homology
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BLAST of mRNA_P-fluviatile_contig15.2581.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 8.880e-27
Identity = 61/105 (58.10%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:   20 ELSALHRACVSLGRRRERAPEPAVLGSDIEWIARPTGPHGPPATFQLVARDGHTVFFHLKRDEWKDGVVRAALKELLANNTVTLADDSVKADLTHVFNSYGARGT 124
            ELS+  R C+ L  RR RA  PAVLG DIEW  RP+GP    A  QL ARDG+TV FHLK +E + G++  ALKELL N+T+ LA  SV+ DLTH+FNSYG  GT
Sbjct:  100 ELSS--RICLQL-LRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGT 201
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0J2_ECTSI8.880e-2758.103'-5' exonuclease domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 16..123
e-value: 3.4E-8
score: 34.9
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 38..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:2571640..2572151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2581.1mRNA_P-fluviatile_contig15.2581.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 2569563..2572682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2581.1 ID=prot_P-fluviatile_contig15.2581.1|Name=mRNA_P-fluviatile_contig15.2581.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=125bp
MASRLPRWSQGQSRGRDQRELSALHRACVSLGRRRERAPEPAVLGSDIEW
IARPTGPHGPPATFQLVARDGHTVFFHLKRDEWKDGVVRAALKELLANNT
VTLADDSVKADLTHVFNSYGARGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf