prot_P-fluviatile_contig15.2531.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2531.1
Unique Nameprot_P-fluviatile_contig15.2531.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length196
Homology
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BLAST of mRNA_P-fluviatile_contig15.2531.1 vs. uniprot
Match: D7FV65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV65_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 5.040e-37
Identity = 76/116 (65.52%), Postives = 85/116 (73.28%), Query Frame = 0 
Query:    1 MEIVNPLLAHALDLLKRGHAESAEAAFAEAASACCEAHGEIDIVTARTLAHVARVSCLRGKRDFALQVYERILRIHEALPAPSNSDHAIVLSELAQIHHERGSQGEAMTLWRSLAV 116
            MEIVNPLLA+AL +LK+G  E AE  F +A SAC  A GE DIVTARTLAH+ARV  L+GK D A+Q+YERILRIHEALP P NSDHA+ L ELA I  E GSQG A  L R   V
Sbjct:    1 MEIVNPLLANALGVLKQGSTEIAEKEFTKAVSACLTAFGETDIVTARTLAHLARVCRLQGKVDVAIQMYERILRIHEALPEPLNSDHAVALGELAAIREEGGSQGSADILRRRADV 116
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV65_ECTSI5.040e-3765.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..178
e-value: 3.1E-12
score: 48.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:2086983..2088425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2531.1mRNA_P-fluviatile_contig15.2531.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 2086930..2088536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2531.1 ID=prot_P-fluviatile_contig15.2531.1|Name=mRNA_P-fluviatile_contig15.2531.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp
MEIVNPLLAHALDLLKRGHAESAEAAFAEAASACCEAHGEIDIVTARTLA
HVARVSCLRGKRDFALQVYERILRIHEALPAPSNSDHAIVLSELAQIHHE
RGSQGEAMTLWRSLAVAFELQPGEKRRKQLPLRKGARHVATTHPATRRRK
ISATRKTRRVVTTKRAIAKMKMTKMRRLTPVANSRINGSRRHNVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf