mRNA_P-fluviatile_contig1.163.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: D7G9I0_ECTSI (C2H2 zinc finger, ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I0_ECTSI) HSP 1 Score: 598 bits (1543), Expect = 1.640e-203 Identity = 377/603 (62.52%), Postives = 415/603 (68.82%), Query Frame = 2
Query: 314 LVYHLTKDASVQTRHLVVYNTGPAVGVDEVTLRRVFEAYGAVDRIYCPNSAAARVVITFHE-------------------------------------VSSAARARAERNRPPEIEDRVRAGAPGAAFASDVFAPTPGEPCPLLGRWLKVAFANVRVRHHQGGTAPSCAEGGRRVGADEGSSLSSPAAAAAVLPFKAFDALAAGGTTARDTRPTPCPLCGRRCGGQRGLRMHLVGAHPLEIKDREHFVQLLRQGSASLPRMPQSNDDGGGLISRAEAPLEAP--DVSPESEIGNEGGXXXXXXGKAPVVSRVGAGAAAKGRAGATLPPVFVVARSGDLEGLKMLVEGDGGSSGGWNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACWGGHLSTCRLLFDRGANHRNVNAYGCNVAHWCGLSGDVEVCRWLARSTEDGGAGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VVPECAWARDEGGYTPADVARLAGHVSLAD 1990
LVYHLTK +QTRHLVVYNTGPAVGVDEVTLRRVFEAYG V+R+ CPN AAARV+I+FHE VSSAARARAERNRPPEIE+RVR G PGAA ASDVFAPTPGEPCPLLGRWLKV+FA+VRVRH+ G +PA + + FKAFDALAAGGT + D RPTPCPLCGR CGGQRGLRMHLVGAHPLE+KDR+HFVQLL++GSASLP P+EAP D++ + G G AP V G LPP F AR+GDL LK LVE +G W P++A+DKNGSS LDWAAGEGRLEVCRYLL ECGVD GG+C RGR EGRT XXXXXXXXXXXXXXXXL+TPRPV+ AA + F+SPDV AAEGTTPLHWACWG HL+TCRLLF+RGA+HR+VNAYGCNVAHWCGLSGDV+VCRWL+R E+GGAGGLDWAKTNL XXXXXXXXXXXXXXXXXXXXXXXXXXX VVP AW RDEGGYTP DVARLAGHV LAD
Sbjct: 54 LVYHLTKKVGIQTRHLVVYNTGPAVGVDEVTLRRVFEAYGEVERVCCPNPAAARVLISFHEIHGQMLVRHPVSSRPCPSRTTSGTAAYGGTLAERPDRVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKVSFADVRVRHNGGXXXXXXXXXXXXX-------XXAPAVPSHLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLP------------------PMEAPGTDLATRRNDHDGVGQATEEDGGAPAV---GXXXXXXXXXXXXLPPGFAAARAGDLGALKRLVEEEG-----WEPKTALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTXXXXXXXXXXXXXXXXXLETPRPVDAAAAVSVVGGGDGTLVSPGGE----RTFVSPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVPRRAWERDEGGYTPEDVARLAGHVDLAD 619
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A6H5K2T6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T6_9PHAE) HSP 1 Score: 534 bits (1376), Expect = 6.780e-179 Identity = 338/560 (60.36%), Postives = 368/560 (65.71%), Query Frame = 2
Query: 311 ALVYHLTKDASVQTRHLVVYNTGPAVGVDEVTLRRVFEAYGAVDRIYCPNSAAARVVITFHEVSSAARARAERNRPPEIEDRVRAGAPGAAFASDVFAPTPGEPCPLLGRWLKVAFANVRVRHHQGGTAPSCAEGGRRVGADEGSSLSSPAAAAAVLPFKAFDALAAGGTTARDTRPTPCPLCGRRCGGQRGLRMHLVGAHPLEIKDREHFVQLLRQGSASLPRMPQSNDDGGGLISRAEAPLEAP--DVSPESEIGNEGGXXXXXXGKAPVVSRVGAGAAAKGRAGATLPPVFVVARSGDLEGLKMLVEGDGGSSGGWNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACWGGHLSTCRLLFDRGANHRNVNAYGCNVAHWCGLSGDVEVCRWLARSTEDGGAGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXVV-----PECAWARDEGGYTPADVARLA 1969
ALVYHLTK A +QTRHLVVYNTGP VGVDEVTLRRVFEAYG V+R+YCPN AAARV+I+FHEVSSAARARAERNRPPEIE+RVR G PGAA ASDVFAPTPGEPCPLLGRWLK + R R QG PAA + FKAFDALAAGGT + D RPTPCPLCGR CGGQRGLRMHLVGAHPLE+KDR HFVQLL++GSASLP P+EAP D++ N G G AP V A L P F AR+GDL LK LVE +G W P++A+DKNGSS LDWAAGEGRLEVCR TS XXXXXXXXXXXXX L+TPRPV+ AA PDV AAEGTTPLHWACWG HL+TCRLLF+RGA+HR+VNAYGCNVAHWCGLSGDV+VCRWL+R E+GG GGLDWAKTNLQXXXXXXXXXXXXXXXXXXX X P AW +DEGGYTP DVARLA
Sbjct: 90 ALVYHLTKKAGIQTRHLVVYNTGPVVGVDEVTLRRVFEAYGEVERVYCPNPAAARVLISFHEVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKAGSSQRRRRRLQGKL---------------------PAATRXLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRNHFVQLLQRGSASLP------------------PMEAPGTDLATRRNGHNGIGQGTEEGGGAPAVXXXXXXXXXXXXA---LLPGFAAARAGDLGALKRLVEEEG-----WAPKTALDKNGSSPLDWAAGEGRLEVCR-----------------------TSLXXXXXXXXXXXXXLLLETPRPVDAAAAVSVVGGGDGTLVSP----GXXXXXXXPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGPGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXLAEQTTSXXXXXXXGPRRAWEKDEGGYTPEDVARLA 575
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A7R9TTM5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TTM5_MICPS) HSP 1 Score: 80.1 bits (196), Expect = 8.350e-13 Identity = 86/285 (30.18%), Postives = 112/285 (39.30%), Query Frame = 2
Query: 1169 TLPPVFVVARSGDLEGLKMLVEGDGGSSGGWNPRS-----AVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACW-GGHLSTCRLLFDRGANHRNVNAYGCNVAHWCGLSGDVEVCRWLARSTEDGGAGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPECAWARDEGGYTPADVARLAGHVSLADRVSAK 2005
T P + AR GDL + LV DG W+P+S VD GS L WAAGEG +++ RYL+ G DP +T XXXXXXXXXX N A + D +GTTP A W GG ++ L+ D GA+ +N +GCN A W ++GDVE LA G+D N + A D G TPA++ARL G+ LA +SA+
Sbjct: 31 THPGLLACAR-GDLREVARLVNEDG-----WDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDP---------RRAQTKRDRRGAXXXXXXXXXXXXXXXXTNAAR-------------------------VDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGADPTALNVFGCNAAQWAAMNGDVEALELLAEL-------GVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGLKHMRA---DADGNTPAEMARLEGYAELASWLSAR 265
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A061SCH4_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCH4_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 1.850e-11 Identity = 62/172 (36.05%), Postives = 81/172 (47.09%), Query Frame = 2
Query: 1259 WNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAE--GTTPLHWACWGGHLSTCRLLFDRGANHRNVN--AYGC-NVAHWCGLSGDVEVCRWL 1759
W+P VD++GS+ L WAAG GRLEVC++L+ EC V +V G XXXXXXXXXXX D + + + ++ D+ A G P+HWA GGH+S C LF GAN N ++GC N A W G V +WL
Sbjct: 18 WHPEKIVDRHGSTALMWAAGNGRLEVCKFLIDECKVSVDQENKV-GXXXXXXXXXXXXXXXXXXLYHAGADPQKQMKDGTRALDWAVFFGSLSVADWLAHE----LACDINAKNYLGCAPVHWAAAGGHISACEWLFANGANFSXANQHSHGCLNKAAW---KGHAXVVQWL 181
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: C1N3W7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3W7_MICPC) HSP 1 Score: 78.6 bits (192), Expect = 1.870e-11 Identity = 85/285 (29.82%), Postives = 111/285 (38.95%), Query Frame = 2
Query: 1169 TLPPVFVVARSGDLEGLKMLVEGDGGSSGGWNPRS-----AVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACW-GGHLSTCRLLFDRGANHRNVNAYGCNVAHWCGLSGDVEVCRWLARSTEDGGAGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPECAWARDEGGYTPADVARLAGHVSLADRVSAK 2005
T P + AR GDL + LV DG W+P+S VD GS L WAAGEG +++ RYL+ G DP +T XXXXXXXXXX N A + D +GTTP A W GG ++ L+ D G + +N +GCN A W ++GDVE LA G+D N + A D G TPA++ARL G+ LA +SA+
Sbjct: 271 THPGLLACAR-GDLREVARLVNEDG-----WDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDP---------RRAQTKRDRRGAXXXXXXXXXXXXXXXXTNAAR-------------------------VDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGVDPTALNVFGCNAAQWAAMNGDVEALELLAEL-------GVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGLKHMRA---DADGNTPAEMARLEGYAELASWLSAR 505
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A2R5GK30_9STRA (Ankyrin repeat domain-containing protein 17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK30_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.370e-10 Identity = 69/207 (33.33%), Postives = 93/207 (44.93%), Query Frame = 2
Query: 1169 TLPPVFVVARSGDLEGLKMLVEGDGGSSGGWNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEG-RTSXXXXXXXXXXXXXXXXLD---TPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACWGGH----LSTCRLLFDRGANHRNVNAYGCNVAHWCGLSGDVEVCRWLAR 1765
+L P RSGDLE L+ V + GW+ +AVD+NG++ L WAAG G LEVC++L+ EC +DP + Q R RT+ ++ +P T XXXXXXXXXXXX K SP + + G W L+ C L +RG + +N G H G+ VC WL R
Sbjct: 434 SLGPELDACRSGDLEALRKAV------AAGWDAHAAVDRNGANGLLWAAGFGNLEVCKFLVHECKLDPVNASQKARRGYSMRTALHWAARNGHMDVVRWLVEDQASPADAVTGDGTTPLCFXXXXXXXXXXXXXXXKAGASPATSNSFGCNLAMWVAQSPQHESALTLCDYLLERGVDFTRINHNGQGCLHKAAQRGNRAVCEWLLR 634
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A7S2UJ99_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ99_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.830e-10 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 2
Query: 1196 RSGDLEGLKMLVEGDGGSSGGWNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGVDPGGSCQVRGRAEGRTSXXXXXXXXXXXXXXXXLDTPRPVNTAAXXXXXXXXXXXXXXXXXXXSDGKNFISPDVAAAEGTTPLHWACWGGHLSTCRLLFDRGANHRNVNAYGCNVAHWCGL-SGD--VEVCRWL 1759
+ G LEGLK + + G++P+ +D+NG+S+L WAAG G L++ R+L++ CG D + GRT+XXXXXXXXXXXXXXXX D + ++ D + +GTT R L DRG + +N++GCN WC SGD +E+ +WL
Sbjct: 287 KEGYLEGLKQAI------ANGYDPKVELDRNGASVLLWAAGCGHLQIVRFLVETCGCDANQKQSGKRSFAGRTTXXXXXXXXXXXXXXXXXDVVK-------------------------------VNLDASTVDGTTAFCXXXXXXXXXXXRFLHDRGCDVHKLNSFGCNAMLWCAQGSGDCSMEIMQWL 440
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A7S3XPC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPC8_HETAK) HSP 1 Score: 67.0 bits (162), Expect = 1.190e-9 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 2
Query: 1580 PDVAAAEGTTPLHWACWGGHLSTCRLLFDR-GANHRNVNAYGCNVAHWCGLSGDVEVCRWL 1759
PD +GTTPLH+A WGG R L + GA+ N +GCN + WC L+GD ++ R+L
Sbjct: 19 PDQPTEDGTTPLHYAVWGGRRGAVRWLVEEAGADVNRRNVFGCNASQWCALTGDTQLLRYL 79
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A7S2DLB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLB6_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.350e-9 Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 2
Query: 1178 PVFVVARSGDLEGLKMLVEGDGGSSGGWNPRSAVDKNGSSLLDWAAGEGRLEVCRYLLKECGV 1366
P ARSGDL L+ LV GGW+P A DK+GS+ L WAAGEG L+VC+YL+ C V
Sbjct: 13 PGLEAARSGDLASLQALV------IGGWDPHRATDKHGSNSLMWAAGEGHLQVCQYLVNTCKV 69
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Match: A0A7S1ZAX2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAX2_TRICV) HSP 1 Score: 61.6 bits (148), Expect = 5.080e-8 Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 2
Query: 1586 VAAAEGTTPLHWACWGGHLSTC-RLLFDRGANHRNVNAYGCNVAHW----CGLSGD--VEVCRWL 1759
V + +G TPLH AC+GGHL T RL+ GA+ R VN +GC AHW C +G+ V+VC ++
Sbjct: 1 VPSGDGPTPLHLACYGGHLPTVIRLVETHGADPRRVNEWGCGCAHWAAMSCNPNGEDAVKVCEYV 65 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.163.1 >prot_P-fluviatile_contig1.163.1 ID=prot_P-fluviatile_contig1.163.1|Name=mRNA_P-fluviatile_contig1.163.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=596bp MSPDGNNPAARDPPPAALVYHLTKDASVQTRHLVVYNTGPAVGVDEVTLRback to top mRNA from alignment at P-fluviatile_contig1:2126907..2133573+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.163.1 ID=mRNA_P-fluviatile_contig1.163.1|Name=mRNA_P-fluviatile_contig1.163.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6667bp|location=Sequence derived from alignment at P-fluviatile_contig1:2126907..2133573+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2126907..2133573+ >mRNA_P-fluviatile_contig1.163.1 ID=mRNA_P-fluviatile_contig1.163.1|Name=mRNA_P-fluviatile_contig1.163.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3576bp|location=Sequence derived from alignment at P-fluviatile_contig1:2126907..2133573+ (Porterinema fluviatile SAG_2381)back to top |