prot_P-fluviatile_contig15.2484.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2484.1
Unique Nameprot_P-fluviatile_contig15.2484.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length374
Homology
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BLAST of mRNA_P-fluviatile_contig15.2484.1 vs. uniprot
Match: A0A6H5JBS2_9PHAE (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS2_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 6.410e-144
Identity = 257/372 (69.09%), Postives = 276/372 (74.19%), Query Frame = 0 
Query:    1 MPRQVTRALDKLKQPVRKAVLSGGLDRDVLDDEPILTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPA-AATTGSAQRLMERLSPAVCQAVQAVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATLQRRGRDAIDNRCGYLIGFLKQYQDGVAVVGAPGSSCNSSSAAHTSRGNNASASSSNADGQHFAXXXXXXXXXXXXXXNGHNSYXXXXXXXXXXXXXXXXXXXXXXXXXXMSGNGGAGGGHTL--------GGTRPISYLQAPVRKELEKLFEAGRDKTVLEDVGLMKQLSRLGEEQALAALRNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPGKVG 363
            MPRQ TR +DKL+ PVRKA L+G LDR  L D+P+LTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPA  AT GSAQRL+ERLSP V QAVQ VFDPV+DR V EDRALMELLAKVPEEQALAALKKYRAT+QRRGRDAI+NRCGYLIGFLKQYQDGVA+VG PG+      A H +R  NA  SSSN  GQH                NGHN                             S + G G              G RPI+YLQAPVRKELEKLFE+G+DKTVLEDVGL+KQLSRLGEEQALAAL+NYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAP + G
Sbjct:   29 MPRQATRPVDKLRGPVRKAALAG-LDRTSLQDDPLLTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGATAGSAQRLLERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAIVGVPGN------AVHQAR--NALESSSNGYGQHLTNGSAGQSSSSAT--NGHNP------NANGARNGAMNGAGGGPSATATSSSQGTGAXXXXXXXXXXNSSGVRPITYLQAPVRKELEKLFESGKDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGG 383
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBS2_9PHAE6.410e-14469.09SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 279..348
e-value: 3.3E-10
score: 39.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:1754723..1757816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2484.1mRNA_P-fluviatile_contig15.2484.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 1752138..1757816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2484.1 ID=prot_P-fluviatile_contig15.2484.1|Name=mRNA_P-fluviatile_contig15.2484.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=374bp
MPRQVTRALDKLKQPVRKAVLSGGLDRDVLDDEPILTGLSELQTKQALKV
LDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAAATTGSAQRLMERLS
PAVCQAVQAVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATLQR
RGRDAIDNRCGYLIGFLKQYQDGVAVVGAPGSSCNSSSAAHTSRGNNASA
SSSNADGQHFANNNGSAASQSSSAANGHNSYAGGSRNGASHGAAVAAPSM
TAASHATMSGNGGAGGGHTLGGTRPISYLQAPVRKELEKLFEAGRDKTVL
EDVGLMKQLSRLGEEQALAALRNYKEASKHRRDIHNKSAYLMGILRGYIE
GTTPISKAPGKVGAATKVRAYGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD