prot_P-fluviatile_contig1.160.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.160.1
Unique Nameprot_P-fluviatile_contig1.160.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length163
Homology
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.950e-86
Identity = 138/162 (85.19%), Postives = 150/162 (92.59%), Query Frame = 0
Query:    1 MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            MKFT TV VLACVGSA AFVP+ALP ARMS+  TTMSA++   P+SR DFLK+A GAAA+LGLAAPALAE+DNPVVPFLGGGDKIDVNNANVRAYIKL GMYP+AAGKIVSNGPYSSVSEIY+IKGL+NEEKAAIKKHES+FITMDPQAMYTIDRINNGLYR
Sbjct:    1 MKFT-TVAVLACVGSASAFVPHALPAARMSARTTTMSAES---PASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.680e-58
Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 0
Query:    1 MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAV-LGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            MK T  +V+ A  G AQAFV    P+A + S+  +M+AQ    P  R  FLK+A  AA V + +AAPALAEIDNPVVPFLGGGDK+D+NNANVRAYIK+PGMYP  AGK+VSNGPY++V+++YNIKGL+ +EK+ +KK+ES+F+T++PQ MY IDRINNGLYR
Sbjct:    1 MKVTGAIVLAAACG-AQAFVA---PSAGVRSTQLSMTAQ----PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 157 bits (396), Expect = 2.100e-46
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0
Query:   47 RADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            R +FL    GA     +AAPALA+ D   +P+LGG  KID+NNAN+R Y KLPGMYP AAGKI SNGPY SVS++YNIKGL + EKAAIKK+ES+FIT++P  MY IDR+NNGLYR
Sbjct:   22 RRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC)

HSP 1 Score: 150 bits (378), Expect = 1.650e-43
Identity = 82/160 (51.25%), Postives = 106/160 (66.25%), Query Frame = 0
Query:    6 TVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAVLGLAA---PALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            T ++   + +A AF PNA P A             Q A ++ A   ++ +GAAA  G AA    A A +D   V +LGGG  +DVNNANVRAY++LPGMYP+AAGKIV++GPY SV+++YNI GLT+ EK  IKK+ESKF+  DP A Y IDR+NNGLYR
Sbjct:    3 TAIIATLISTAAAFAPNAQPAA-------------QTALNAEAADRRSFLGAAAAFGAAAIPAAASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.410e-43
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   10 LACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAV-LGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            LA V +A AFVP      + +   TT      NA + R +F   A GAAAV    AAPA A +D   + +LGG   +D+NNANVR Y+K+PGMYP AAGKIVSNGPY SVS++YNI GLT+ EK AIKK+ES+F+ + P A Y IDRINNGLYR
Sbjct:    7 LATVATAAAFVP------QQAGPQTTA----LNAEAGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA)

HSP 1 Score: 145 bits (367), Expect = 8.660e-42
Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 0
Query:   63 LAAP--ALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            LAAP  A+A++D   +P+LGG +KID+NNANVR Y KLPGMYPNAA KI SNGPY SVS++Y+IKGL+ +EK+ IKK+ES+ IT++P AMY IDR NNGLYR
Sbjct:   52 LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S3L326_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L326_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.130e-41
Identity = 72/116 (62.07%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   47 RADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            R +FL  AV AAA L +   ALA  D   + +LGG D ID+NNANVR Y+KLPGMYP+AAGKI +NGPY+SV +IYNI GLT++EK  +KK+ESKF  + P A Y IDRINNGLYR
Sbjct:   32 RREFLSAAVVAAAGLAVPGSALAVRDYENLAYLGGSDTIDINNANVRVYLKLPGMYPSAAGKIAANGPYNSVGDIYNIPGLTSKEKEVMKKYESKFTALKPSADYVIDRINNGLYR 147          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S4RBC4_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBC4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.790e-41
Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   42 NAPSSRADFLKTAVGAA-AVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            NA + R +F  TA  AA    G+AAPA A +D   + +LGG + +D+NNANVR Y+K+PGMYP  AGKIVSNGPY+SV+++Y IKGLT  EK  +KK+ES+F T  P   Y IDRINNGLYR
Sbjct:   47 NAEAGRREFFGTAAAAAIGAFGVAAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKGVLKKYESRFTTFSPSPDYVIDRINNGLYR 168          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.830e-40
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0
Query:   42 NAPSSRADFLKTAVGAA-AVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            NA + R +F  +A  AA    G+AAPA A +D   + +LGG   +D+NNANVR Y+K+PGMYP  AGKIVSNGPY+SVS++YNIKGLT+ EK  +KK+ES+F    P A Y IDRINNGLYR
Sbjct:   29 NAEAGRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150          
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S2TDD2_PROMC (PS II complex 12 kDa extrinsic protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TDD2_PROMC)

HSP 1 Score: 140 bits (354), Expect = 4.140e-40
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   42 NAPSSRADFL-KTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 162
            NA + R +F  K A   AAV+G AAPA A ID   + +LGG   +D+NNANVRAY+K+PGMYP  AGKIVSNGPY+SV +IY+IKGLT+ E   +KK+E +F+   P   Y IDRINNGLYR
Sbjct:   10 NAEAGRREFFSKAAAATAAVVGAAAPANAVIDYENIGYLGGSSIVDLNNANVRAYLKMPGMYPTVAGKIVSNGPYASVKDIYSIKGLTSAEADVLKKYEDRFVAKTPSPDYVIDRINNGLYR 131          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E0_ECTSI1.950e-8685.19PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A836CCI8_9STRA3.680e-5861.96PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
F0YKI8_AURAN2.100e-4664.66PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
K0TEZ3_THAOC1.650e-4351.25PS II complex 12 kDa extrinsic protein n=1 Tax=Tha... [more]
A0A6U4G1G5_9STRA2.410e-4355.19PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
A0A7S1XZL8_9STRA8.660e-4266.67PS II complex 12 kDa extrinsic protein n=1 Tax=Pha... [more]
A0A7S3L326_9STRA4.130e-4162.07PS II complex 12 kDa extrinsic protein n=1 Tax=Amp... [more]
A0A7S4RBC4_9STRA7.790e-4157.38PS II complex 12 kDa extrinsic protein n=3 Tax=Dit... [more]
A0A7S2GXA3_9STRA1.830e-4058.20PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A7S2TDD2_PROMC4.140e-4058.20PS II complex 12 kDa extrinsic protein n=1 Tax=Pro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320coord: 70..152
e-value: 1.5E-26
score: 93.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.699
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 74..162
IPR010527Photosystem II PsbU, oxygen evolving complexPFAMPF06514PsbUcoord: 82..161
e-value: 4.3E-28
score: 97.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2102115..2106310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.160.1mRNA_P-fluviatile_contig1.160.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 2102115..2107091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.160.1 ID=prot_P-fluviatile_contig1.160.1|Name=mRNA_P-fluviatile_contig1.160.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=163bp
MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADF
LKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPG
MYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAM
YTIDRINNGLYR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010527PSII_PsbU