mRNA_P-fluviatile_contig15.2370.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2370.1
Unique NamemRNA_P-fluviatile_contig15.2370.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A835Z8S7_9STRA (Integral membrane protein DUF92-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S7_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.500e-94
Identity = 155/232 (66.81%), Postives = 181/232 (78.02%), Query Frame = 1 
Query:  322 SLVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGL 1017
            +L +N++GFG+   +GK   +LT  GA  AY+LG +LW  LG  GW TCVLYL AGSAVTK+KM EK + GIAEGRGG RGPENVWGSAATGA CA+A  +WP+ +  LRVGY ASLATKL DTFASEIGKAYG+ T+LITTL+P P GTEGAVSLEGT AGV GS+II+ +AAA G++ A A   C +AAFVA N ES LGATTQGK  WLTNEV+NF+NT VGAAVG  L
Sbjct:    3 ALTINSVGFGLFIGSGKAEKLLTPQGAAHAYVLGNILWYALGWRGWTTCVLYLLAGSAVTKVKMAEKTARGIAEGRGGRRGPENVWGSAATGAACALACVVWPQRAALLRVGYAASLATKLGDTFASEIGKAYGRTTYLITTLRPVPAGTEGAVSLEGTAAGVGGSLIIAWYAAAIGLMPASAIGVCAVAAFVACNVESVLGATTQGKTAWLTNEVINFVNTTVGAAVGMAL 234
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: D7G5U0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U0_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 8.850e-89
Identity = 148/184 (80.43%), Postives = 159/184 (86.41%), Query Frame = 1 
Query:  484 AGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGLGLACKV 1035
            AGSAVTK+KM++KESLGIAEGRGGARGPENVWGSAAT               GPLR+GYVASLATKLSDTFASE+GKAYGK TFLITT KP PPGTEGAVSLEGTLAGV GS+IISGFAA  GVV+AKA P+C+IAAFVATNFES LGATTQGK+PWLTNEVVNF+NTVVGAAVG GLGLAC V
Sbjct:    2 AGSAVTKLKMEKKESLGIAEGRGGARGPENVWGSAAT---------------GPLRIGYVASLATKLSDTFASEVGKAYGKHTFLITTFKPVPPGTEGAVSLEGTLAGVVGSVIISGFAATAGVVTAKALPACLIAAFVATNFESVLGATTQGKVPWLTNEVVNFVNTVVGAAVGVGLGLACGV 170
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S4FD08_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FD08_CHRCT)

HSP 1 Score: 280 bits (717), Expect = 1.220e-84
Identity = 148/238 (62.18%), Postives = 180/238 (75.63%), Query Frame = 1 
Query:  304 PPPVQTS----LVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAV 1005
            PP + T+    +V+N+    +  A G+R  +LT SG  SA++LG+ LW+TLG  GW TCV YL  GSAVTK+KM EKE+ GIAE RGGARGPENVWGSAAT A+CAI +   P  + PL VGY ASLATKL+DT ASE+GKAYGK T+LITTLKP PPGTEGAVSLEG  AGV GSI+++ FA A G+  A A   C+IAAF+A N ES +GA+ QG++PW+TNEVVNFINT+VGA V
Sbjct:  101 PPSIATAAVQAIVLNSGLAAIGTALGQR--VLTPSGLVSAWVLGVTLWSTLGWQGWATCVFYLVCGSAVTKLKMAEKEAKGIAESRGGARGPENVWGSAATAALCAIGTVYMPLATTPLLVGYTASLATKLADTSASEVGKAYGKSTYLITTLKPVPPGTEGAVSLEGLAAGVVGSIVLAAFAIAIGLNHASALVPCIIAAFIANNVESLIGASVQGRIPWMTNEVVNFINTLVGAVV 336
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: L1JQB2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQB2_GUITC)

HSP 1 Score: 276 bits (705), Expect = 3.040e-84
Identity = 147/229 (64.19%), Postives = 176/229 (76.86%), Query Frame = 1 
Query:  322 SLVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVG 1008
            SLV+N++   +L ATGK  S LT SG  SA+LLG++LW +LG  GW TCV+YL AGS VTK+KM EKE  GIAE RGGARGPENVWGSAAT A CA+ ++   + +G  R+G+VASLATKLSDTFASE+GKAYGK+TFLIT++KP P GTEGAVS+EGTLAGV GS++I+ +A    V+ A   P  MIAAFVAT  ES +GAT Q K  WLTNE VN INT +GAAVG
Sbjct:   11 SLVLNSVLALLLLATGKYRSFLTSSGLLSAWLLGVILWGSLGFAGWSTCVVYLIAGSLVTKVKMAEKEKKGIAESRGGARGPENVWGSAATAAFCAMMATYSLQDTGLFRIGFVASLATKLSDTFASELGKAYGKKTFLITSMKPVPAGTEGAVSVEGTLAGVVGSLVIAVWAVMTNVMLASEIPVVMIAAFVATTCESVIGATVQDKYKWLTNEAVNAINTSIGAAVG 239
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S2GNY6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNY6_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.140e-84
Identity = 152/246 (61.79%), Postives = 184/246 (74.80%), Query Frame = 1 
Query:  283 LPLLQVLPPPVQTSLVVNTLGFGVL-EATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGL 1017
            LP+  +L      ++ +NT G  ++  ATG++  +LT SG   A+ LG++LW+ LG  GW  CV YL  GS VTK+K++EK  LGIAEGRGG+RGPENVWGSAATGA+CA A   WP+    L+VGYV+S+ATKLSDTFASEIGKAYGKR FLITTLKP P GTEGAVSLEGTLAGV GS+II+ + AA G+VS ++    MIAAFVAT  ES +GAT QGK   LTNEVVNFINT++GA VG  L
Sbjct:   40 LPVADLLLSEPGKAVALNT-GLAIMGSATGQK--MLTPSGLLHAWALGIILWSALGWQGWSLCVFYLVMGSVVTKVKIEEKSKLGIAEGRGGSRGPENVWGSAATGALCAAAMLKWPQYRSLLQVGYVSSIATKLSDTFASEIGKAYGKRCFLITTLKPVPRGTEGAVSLEGTLAGVVGSLIIAIYGAAVGLVSWQSITVTMIAAFVATTAESLIGATAQGKFKILTNEVVNFINTLIGAFVGISL 282
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S3ALU7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ALU7_9EUKA)

HSP 1 Score: 270 bits (690), Expect = 1.280e-81
Identity = 147/247 (59.51%), Postives = 182/247 (73.68%), Query Frame = 1 
Query:  298 VLPPPVQTSLVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSA--KAFPS---CMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGLGL 1023
            VL P V T++ +N+    V  A G++  +LT SG   A+ LG++LW +LG  GW TCVLYL  GS VTK++M EKE+LGIAEGRGG RGPENVWGSAAT A CA+AS+ WP  +   R+G+VASLATKLSDT ASEIGKA+G+ T+LITT K  P GTEGAVSLEGT+AGV GSI+++ + A  G++    +A P+   C++AAFVATN ES +GA  Q K  WLTNEVVNF+ TVVGAAVG G  L
Sbjct:   30 VLSPRVLTAVGLNSGLAAVGVAKGQK--VLTPSGLAHAWALGVMLWGSLGVVGWSTCVLYLVCGSRVTKVRMVEKEALGIAEGRGGMRGPENVWGSAATAAACALASAAWPSRAAVFRIGFVASLATKLSDTCASEIGKAFGQTTYLITTFKLVPAGTEGAVSLEGTVAGVVGSIVLTAYGALVGLLGGQGRALPAAVACVLAAFVATNVESVIGAVAQDKFAWLTNEVVNFVMTVVGAAVGIGFAL 274
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S2RSZ3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ3_9STRA)

HSP 1 Score: 267 bits (682), Expect = 8.170e-80
Identity = 146/244 (59.84%), Postives = 181/244 (74.18%), Query Frame = 1 
Query:  286 PLLQVLPPPVQTSLVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGL 1017
            PL+ VL P V T++ +N+   G+  AT  R S+LT SG   A+ LG++LW++LG  GW  CVLYL AGS VTKI+MKEK+ LGI+EGRGG RGPENVWGSAATGA+CAIA+  WP     L+V YV+S+ATKL+DTF SE+GKA+GKR FLITTLKP P GTEGA+S+EGTLAGV GS++I+ + A   ++          AAF AT  ES +GAT QG+   LTNEVVNFINT++GAAV AGL
Sbjct:   71 PLVPVLGP-VPTAVGLNSALAGLGVAT--RQSMLTPSGLLHAWALGVILWSSLGWQGWSLCVLYLLAGSKVTKIRMKEKQDLGISEGRGGRRGPENVWGSAATGALCAIAALRWPEARPLLQVAYVSSIATKLADTFQSEVGKAFGKRCFLITTLKPVPRGTEGAISVEGTLAGVVGSLLIAAYGAGVNLMPWSCVWVVAAAAFFATMAESLIGATAQGRFKLLTNEVVNFINTLIGAAVAAGL 311
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S0QBY2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBY2_9EUKA)

HSP 1 Score: 265 bits (676), Expect = 2.020e-79
Identity = 141/239 (59.00%), Postives = 176/239 (73.64%), Query Frame = 1 
Query:  292 LQVLPPPVQTSLVVNTLGFGVLEA-TGKRGSILTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAV 1005
            + + P     +L +N+ G  V+    G+R  +LT SG   ++ LG++LWT LG  GW TCVLYL  GSAVTK++  +KE+LGIAEGRGGARGPENVWGSAAT A+CAI S   P L+   R+G+VASLATKL+DT ASE+GKAYGK T+LITTL+  PPGTEGAVSLEGTLAG+ GSI+++G+    G+V   A   C++AAF+A N ES +GAT Q  + WLTNEVVNFINT VGA V
Sbjct:   42 MAIAPAAATQALALNS-GLAVMGTLAGQR--MLTPSGLAHSWGLGVILWTALGVRGWSTCVLYLVCGSAVTKLRKAKKEALGIAEGRGGARGPENVWGSAATAALCAIGSLYAPSLAAIFRMGFVASLATKLADTCASEVGKAYGKTTYLITTLRKVPPGTEGAVSLEGTLAGIAGSIVLAGYGIGVGLVPLGALLPCVLAAFIANNVESLIGATAQDNVWWLTNEVVNFINTTVGALV 277
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: W7U4P9_9STRA (Integral membrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4P9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.300e-77
Identity = 143/237 (60.34%), Postives = 169/237 (71.31%), Query Frame = 1 
Query:  343 GFGVLEATGKRGSI-----LTKSGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQG-KLPWLTNEVVNFINTVVGAAVGAGLGLACKV 1035
            GFG+  A    G       LT SG   A++LG+ LW+TLG  GW  CVLYL  GS VTK+K  EKE+LGIAE RGGARGPENVWGSAA G +CA A+   P     L  GYVASLATKLSDTFASEIGKAYGKRTFLIT LKP PPGTEGA+SLEGTLAGV GSIII+        V+ KA P  ++AAF+ATN ES LGA+ Q  + PW TNE +NF+NT++G+ +G G+ LA ++
Sbjct:  114 GFGLNSALALVGLAVKQRWLTSSGLLHAWILGIALWSTLGWRGWALCVLYLICGSLVTKVKQSEKEALGIAEKRGGARGPENVWGSAAAGTICATATIFLPAQLHVLLTGYVASLATKLSDTFASEIGKAYGKRTFLITNLKPVPPGTEGAISLEGTLAGVVGSIIIALAGVGMRFVAWKAVPVVLVAAFLATNVESLLGASLQNDRHPWATNEFINFLNTLIGSLLGIGMVLALRL 350
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BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Match: A0A7S4FVI7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FVI7_9EUGL)

HSP 1 Score: 261 bits (666), Expect = 1.200e-76
Identity = 137/233 (58.80%), Postives = 167/233 (71.67%), Query Frame = 1 
Query:  346 FGVLEATGKRGSILTK-------SGAFSAYLLGLVLWTTLGAWGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGAMCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTLKPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFVATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGLGL 1023
            FG+   TGK   +LT        SG   ++LL ++LWT LG  GW  CVLYL  G AVTK++ KEKE+ GIAEGRGGARGPENVWGSAAT ++CA+ +  +P  +  L +GYVASLATKLSDT  SEIGKAYGK   LITTL+  PPGTEGAVS+EGT+AG+ GS +++ FA   G+++       M+AAF+A N ESFLGAT QG + WLTNEV+NFINT VGA V A LGL
Sbjct:  142 FGLGTVTGKFDRVLTPLMPNPLLSGITHSFLLSVILWTCLGWKGWSVCVLYLFLGVAVTKVRSKEKEAAGIAEGRGGARGPENVWGSAATASICALLTLAFPEQTPLLALGYVASLATKLSDTCGSEIGKAYGKTPILITTLQQVPPGTEGAVSVEGTVAGIIGSAVLAAFAVPAGLINFTGVGIAMVAAFIACNVESFLGATVQGNIKWLTNEVINFINTTVGAIVAAVLGL 374
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8S7_9STRA1.500e-9466.81Integral membrane protein DUF92-domain-containing ... [more]
D7G5U0_ECTSI8.850e-8980.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4FD08_CHRCT1.220e-8462.18Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
L1JQB2_GUITC3.040e-8464.19Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2GNY6_9STRA3.140e-8461.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ALU7_9EUKA1.280e-8159.51Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2RSZ3_9STRA8.170e-8059.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0QBY2_9EUKA2.020e-7959.00Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
W7U4P9_9STRA1.300e-7760.34Integral membrane protein n=1 Tax=Nannochloropsis ... [more]
A0A7S4FVI7_9EUGL1.200e-7658.80Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:211245..218008 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue6e-74
Seed eggNOG ortholog2880.D7G5U0
GOsGO:0005575,GO:0016020
EggNOG free text desc.Integral membrane protein DUF92
EggNOG OGs2QU2J@2759,COG1836@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionProtein of unknown function DUF92, TMEM19
Ec32 orthologEc-12_009110.1
Exons7
Model size2184
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2370.1prot_P-fluviatile_contig15.2370.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 211245..216862 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815644.2166064-CDS-P-fluviatile_contig15:211244..2115561622815644.2166064-CDS-P-fluviatile_contig15:211244..211556Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 211245..211556 +
1693562667.4488301-CDS-P-fluviatile_contig15:211244..2115561693562667.4488301-CDS-P-fluviatile_contig15:211244..211556Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 211245..211556 +
1622815644.2319038-CDS-P-fluviatile_contig15:212158..2123711622815644.2319038-CDS-P-fluviatile_contig15:212158..212371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 212159..212371 +
1693562667.4593256-CDS-P-fluviatile_contig15:212158..2123711693562667.4593256-CDS-P-fluviatile_contig15:212158..212371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 212159..212371 +
1622815644.2446094-CDS-P-fluviatile_contig15:212953..2130231622815644.2446094-CDS-P-fluviatile_contig15:212953..213023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 212954..213023 +
1693562667.469973-CDS-P-fluviatile_contig15:212953..2130231693562667.469973-CDS-P-fluviatile_contig15:212953..213023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 212954..213023 +
1622815644.2584748-CDS-P-fluviatile_contig15:213965..2140841622815644.2584748-CDS-P-fluviatile_contig15:213965..214084Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 213966..214084 +
1693562667.4806876-CDS-P-fluviatile_contig15:213965..2140841693562667.4806876-CDS-P-fluviatile_contig15:213965..214084Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 213966..214084 +
1622815644.2700648-CDS-P-fluviatile_contig15:215366..2155191622815644.2700648-CDS-P-fluviatile_contig15:215366..215519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 215367..215519 +
1693562667.4920437-CDS-P-fluviatile_contig15:215366..2155191693562667.4920437-CDS-P-fluviatile_contig15:215366..215519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 215367..215519 +
1622815644.2811916-CDS-P-fluviatile_contig15:216228..2163271622815644.2811916-CDS-P-fluviatile_contig15:216228..216327Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 216229..216327 +
1693562667.5048325-CDS-P-fluviatile_contig15:216228..2163271693562667.5048325-CDS-P-fluviatile_contig15:216228..216327Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 216229..216327 +
1622815644.2937448-CDS-P-fluviatile_contig15:216790..2168621622815644.2937448-CDS-P-fluviatile_contig15:216790..216862Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 216791..216862 +
1693562667.5142243-CDS-P-fluviatile_contig15:216790..2168621693562667.5142243-CDS-P-fluviatile_contig15:216790..216862Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 216791..216862 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815644.3051934-UTR-P-fluviatile_contig15:216862..2180081622815644.3051934-UTR-P-fluviatile_contig15:216862..218008Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 216863..218008 +
1693562667.5224576-UTR-P-fluviatile_contig15:216862..2180081693562667.5224576-UTR-P-fluviatile_contig15:216862..218008Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 216863..218008 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2370.1

>prot_P-fluviatile_contig15.2370.1 ID=prot_P-fluviatile_contig15.2370.1|Name=mRNA_P-fluviatile_contig15.2370.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=346bp
MRVIAFVLIALVSASPASSFVGISTPSVLAGSTHPAAAAATAAARRPVNA
ILAAAARRPLADSREAALVGNVYRVARGGGGDGPEGGAMGYAACLPLLQV
LPPPVQTSLVVNTLGFGVLEATGKRGSILTKSGAFSAYLLGLVLWTTLGA
WGWGTCVLYLAAGSAVTKIKMKEKESLGIAEGRGGARGPENVWGSAATGA
MCAIASSIWPRLSGPLRVGYVASLATKLSDTFASEIGKAYGKRTFLITTL
KPAPPGTEGAVSLEGTLAGVFGSIIISGFAAAGGVVSAKAFPSCMIAAFV
ATNFESFLGATTQGKLPWLTNEVVNFINTVVGAAVGAGLGLACKV*
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mRNA from alignment at P-fluviatile_contig15:211245..218008+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2370.1 ID=mRNA_P-fluviatile_contig15.2370.1|Name=mRNA_P-fluviatile_contig15.2370.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6764bp|location=Sequence derived from alignment at P-fluviatile_contig15:211245..218008+ (Porterinema fluviatile SAG_2381)
ATGCGTGTAATCGCATTCGTGCTCATCGCCCTGGTTTCGGCTTCGCCGGC
TAGCAGCTTCGTGGGCATCTCCACGCCGTCGGTCTTGGCAGGTTCGACCC
ATCCTGCAGCAGCAGCAGCTACAGCAGCAGCACGACGGCCTGTGAATGCG
ATCCTTGCAGCAGCAGCTCGGCGACCGCTAGCCGACAGCAGGGAGGCCGC
TCTCGTAGGCAATGTCTACAGAGTGGCGCGAGGTGGAGGAGGGGATGGGC
CAGAGGGTGGCGCAATGGGATACGCCGCTTGTTTGCCGCTTTTGCAGGTC
CTTCCTCCGCCGGTCAGTAGCGCCATCACCATCACACCTGGCTTTTGCAG
CATAGGTCACCTGCTGGTGGTGGCACAAAGCCGCCGCCGGGTACCCAGCC
CTTTGGGACGTCGCTGATGGTTTTGAATTGTAAATATATGAGTTCTGTGT
AATTGCACTTTTTCCCTCTCTGCACGAGTGTGCCGGCTTTATTCGCCCGC
GTCGCTCCTGTCGTGAATGCATACATTATCGTAACATTTCCCCGCAACAT
CGTCGTGTGTGTTCAGGCGAAATGCATTTACACTGTACAGCAGTATCCCA
TTCGCCGCACCGTCCATCATCATGGAGATACAGCTGGCTTCCCTCGCCAC
TGCTTTATCAAACCTTCATGAAGCGAAGTAATGCAGCGGCGCCTGCGATG
TTATTATTGGAGTACCGTTTTCACGGTGTAAACCTAAATGAAATGCGCTC
ACCTGAGTTGGGTGTTCGGTAAGCGGTGAAGCTTTGCCCTCATTAGTCAG
TCACCATCAGCACCCGAAGAATTGTATTACAGCGAGTAAGAATGAAATAC
CTCCTATCCCTCGACTCCGGTTTCGCGATTCCTTACACGAACTCCATGCT
CCTACCCTTAACAGGTGCAGACGTCGCTAGTCGTGAACACCTTGGGGTTC
GGCGTGCTCGAGGCTACGGGCAAACGCGGCTCAATCCTCACCAAGTCGGG
GGCCTTCAGCGCCTACTTACTGGGGCTGGTGCTATGGACGACGCTCGGCG
CGTGGGGTTGGGGAACGTGCGTGTTGTATCTCGCGGCGGGGTCCGCGGTC
ACGAAGATCAAGATGAAAGAGAAAGAGGTACGTCGTGAAGCATCTTGGAG
ATAGTTTGCGATGTCAACCGTGACCTTGGGTGTCGCAGCAAACAAGGGTT
GGAGTTTGGCTTCGACTGTCCCGTGGGTTGGGGAAAATACATCCGTTGGC
TAGGATGGATTGTCCCGTGAGGCCGTTGTCCCGTGAGTCAGTGTGGATTG
CCCCGCGAGTCGGCTTTCCCGGCGACTGGGTCAGATTGTCCCTTGGTTTA
CATGTCCCCTGAGAAAATTGTCCCGCATGTTGATTGTCCCGCGAGTTTAT
TGTGCCGTGAAACAATTGTCCCGTAGGACGTATCCGGGAGGTAAGAGGAA
GTATATTGTCCCGTTGATTAATGCTCCCGCGAGGTGATTGTCTACCGTGT
TGATGATCTAGTAGATCTCGACAATTTGTCCCTTGGTTGGTCGACTCGCG
TGTTCATTGTCCCATTGGTTGGTTTCCTGAGAGTTCGAATCGAATCACCG
ACGTCCTTCCATCCTTCTTATCGTACCCAAGTAATCTCACTCGTTCTTGG
CGTGTATCACCACCACATACTCTCCTTAGTTTTTTTCGGCGTTGTTTGTT
GCTGCGCAGTCGCTGGGTATCGCCGAGGGGAGAGGAGGGGCCAGAGGGCC
TGAGAACGTTTGGGGGTCTGCCGCCACAGGTGGGGGCACAAAAAGAGCGA
CGAAGAGCGAGGCAGAAAAATGAGATATGGATAGATTAGATAGGTTGAGA
TAGTGTAAATATTGAGAATTTTATACATATTTTGTGTAGGTATAGACAGA
GATGCAGATAGAGAGAAAAACAGTGACATATAGATGGACATAGAGAGATA
GAGATAGTGAGATACAGGTAAAGATAGTTATGGAGCGATGAAGAGATAGA
GAAGAGATAGAGAGATGTAGATCAAGGTACAGTAGATAGATAACGAAGGA
GATGTAGTGAGATGCAGATATACCTCCAAGTATTGACTATAAAAAGATAA
ATATTGTGAGATGGAGATATTGATAGATAAGTAGATAGATAGATAGGTAG
ATATGTAGTTAGATAGATAGATACTTCGAAGTTGATGGATTGATAGAGAT
AGAGAAAGAGATACAAAGATCTAGAGGAAGAGAGAGGGAGGGTGAGAGAG
AGGGAGGGGTACAGAGAGCAACAGAGGGAGGGAGGAACAGAAGGAGTGAG
AAGGAAGATATGAAGACGGAGATCCGTATTTGAAGGATGTCGCAAAGGTT
GTCAGACGGAACAGCAGAGTTTCGTTACTCCACCGTGAACATTTCATTCT
GTGCGGGGGAGGCGGTGAAACTACGGTGTGCATCATTGAATCTGACAACC
ATGTTTGAGTCTAACGGTGTCGACATCATGAAAGGCCATTATCACTTGCA
TGTTGCACAATATATATTTTCTTCCTCAACGGTATGGGCTTGGTCGACTG
CAACACCAGCGCCAGCACCAGCGGCGGAGTGCCCCGGAGTCCTGGTCCCA
TCATGAGCTCGCTTTTCATGCTTGCGGTCATCCTCGTGTGCCTGCTTTTC
TCTTCACTTCTTGTTCAGGCCTAGTTTTTGATCTGATCGTTGGCATCGTC
TCTTTTGTCTGGTTACGACAGGGGCAATGTGTGCCATCGCATCCAGCATC
TGGCCTCGGTTGTCGGGGCCTCTGAGGGTCGGCTACGTGGCGTCGCTCGC
GACCAAGCTTTCGGACACTTTCGCGAGCGAGATCGGCAAGGTATCGCATA
GATCAAGATGGCACGTCTGACACTTCGAGTAAGACGCCAGGATGCGGTGT
ATGGGGAGGAAATGTTTGCGATTCAGCGCCAGCCGTGGCAAGTCTTTCGG
ACGCACACGGTACAGGTTGGCATGCGTGTTTCAGGTGTGCTCACGGGGCC
GCCCTTTCGAAACCAACTGCGTCATAAAAAGTCTGCAAAGTTTGTTATGA
TGTCTTGGAATAGTACTCCCGCAGATGCTCTCAATATGGCGGTTTCCTGG
AAGCAGCGGGAAGGCTTGGTTTGCGTGCTTGAGATTTGCCCGCGGGGTTG
CCCTTGCGACGGCAATTTCCTCGAAGGTTCCTGAAAATTCCAAAAGTCCG
TAGAGTGCCGAGTGTTTACGAGGGATACATCTCGACGATGGTTTAAATGC
TTATTGCGGAGGATGGCATGCGTGCTCCTAGCATCGGCAAGGATTGCTTC
CCGACGTCAAATTTGTGAAATTCGTGTCGTAAAAAAAACCGGCCGTCAAG
TTGTCTGAAAGGCAAACACAAGAGCAGAGCTTTCTTCAGACCTTTGATAG
CATAATATACTCCCCGATTTGGCGGAAATTGGGCGTTTGAGAGCAAAAAC
CACTTTCGCGAAGATTGGGTAGCGCGAAAAACGGAAAACCTGAGAGTTTC
GGGGTGGGTGAACCAAGAGCGCCTTGACAATCGGGGTGAATTGGATTCCC
CACGCGCCGGAAAGTTCCCATTATCCCAAAACCTCGGCGCGTCATGTTTT
GTGGGAATCCCAACAACCGCGAACGCCTGATCTTGTTGATTTGCGTCATT
TCCGTAGAATTGCGGAGATCATTTAATGTGTATGTTTTGCTACTCGCGTG
TTGTTGAGTTGCCGCCCAGCACTGCATATCGCGACCTCCGCCCGCCCTAG
CGTTCTCTACTGAGAGACACCGTCATTGCACGGATTCCTCGCACCGCGTT
CCTCTTGCACTGTTGTCTCTGGAGTCGCGAATATGACCCCTCGCTCACCG
CCGTATGTTAAGATCTATATGTGTATTCGTTCCAACATTTTTTGTTGCGT
GTCTGACTTCTAAGCATACGGTGAAAGAACGTTCCTCAGGACGACCCAAC
ACCAGGCGTGCCCCCTCCACCTTCCTGGTTGGCAACGTTTTCGTCGTTTT
CGCTTGTTGAGCCGGCGAACCTTCCCCGGCGTGACAGCCCAAAGCGCATC
CTCACCATTTTGTACATCTCCAAGTTTTTATGTGGACATTTGCATGTGTT
GTTTCTTTTTGCGGTTTTTCAGGCATACGGCAAACGAACATTCCTCATCA
CGACGTTGAAACCCGCCCCTCCCGGCACGGAAGGGGCGGTTAGCCTCGAG
GGGACCCTGGCCGGCGTATTCGGGTCCATCATCATCTCCGGCTTTGCGGC
AGCGGGTGGGGTCGTCTCCGCAAAGGTACTGAAATGAGGTCGTGACCGTC
GGCCGTTGTAATTTTGTAGCCGGTGCCCACTCGTTACTTTACTGTCGTGT
CTATTTGTTGTTTCGCCTGTGCTTGCGTGATTGCTTGCTTGTTGTTGTTA
TTGGTAATGAGGTGTCGACTTGGTGTGGAGCGGGAGCACCCTCCGTCAAC
TAGTGTTCGACTTGATCTTTGTCTTCCGTGCTGATTTGACGGGGATGCCT
TGAGTGACGTCGCGGCACCGCCCATCCAGAACCCCCCTTGCTCGACGTCC
ACGATGTTGCTGTGCCTCCCTCGAAACACCCTCTATCGTGCATTTTCCAG
TGCGCGCTTTTTTTTTTATTAATTTTGTTAACTCCGCGGGGCAATGTGCC
CCGCGAAATCAGTTTATGACATTTGAATCAGGGCCAGGGAGAGGGTTTGG
GGTAGATTTACCTCATCCTCCCGCCTGCCGTGAGACACAAGAGGCGGAGC
CCTGAAACAGATAGTTTTTCCTAAGTCGCCCCATGCGTATGCGCGTGTTC
TTGTTGTTCCGCGGGTTATTGAATGCGTGAAACCGCTGCCTCTCGCAACG
AAGCGATCTTCGTCTTGATCCTCGCTCATCTGAACAAGCACGCGTGCCGC
TTTTGTCATTCAGTAGCTGACACAAAACCTCATGCACGTCTCGTGTTGCT
CTGCAACATCTCTTGATACCGGTGTTGGCGGCAGGCTTTTCCCTCCTGCA
TGATCGCGGCCTTCGTGGCCACCAACTTCGAGAGCTTCCTCGGCGCTACT
ACACAGGGGAAGCTGCCGTGGCTCACCAACGAGGTGAACGAATGGAAATC
TGGGAGTGTGGATGCGACGAGGAGCCTCCTCTTTCGAAGTGAAATCGATG
GAGTGCATAAGTGGTGATCGGCCTCGTTTGACTTGGCTGGATGGCATGGC
GTCAGTACGCGCGAGGGAGGTTCAATCACGTGGGGGATGAGTAAAACAGT
GAGAGAATGAAGTGGCATGCAGATAGGGAGGGAAGGAAGGTAACAATGGT
CAATTGGGTGTGCGGAGCGTAGGCCATGTCGAAAGCGTACAACAACGTGA
GTGAATGGTTGAATGAATCGAACAAGCTCAGGTGGGAAGAGGGATGGAAC
TCGGTACTGATCCACTGTATGCGTGTTCCATATTTCCGAACACAGTCGTC
TTTTTTTCGACGCCAGTCAATCCGTTGATCCCGAATCCCCACATCTACAT
TGATACGCTGAGGCTGACATATTCGTGATGATTGTCGCCGTGGCAGGTGG
TGAACTTTATCAACACAGTCGTTGGTGCCGCTGTCGGAGCCGGCCTTGGG
CTAGCATGCAAAGTCTAGGTATAACAAAACGCGGAGAATTATCATCCTTG
TCGCGGTGATTGCTACCAGGGGCGGCTTCCTTCCTTTTGGTTTTTGAGTT
GACGCGCCAGCGGGAGAGCCAGAGGGAACGCCGGTCGGATCTCATGTTTG
CCTCGGTCCAACTGGACGGATGGAATTCACTTACTCGTAGGAGGTTGGCT
ATCGAAGGCAGACGATTGGTACCCTGCACAGACAAGGGCTCGTCGGAGGG
CCGGATGAAAGGCAGTGCCGTCACAACCTACCTTCCTGCGTGGCAGCTCA
CATGGCGCGGGACATATCTCGAAAGCTTTCATGTAGAACCCGTGGTGCAT
TGAATATCTGATCTAGAGGCCTAGCGAATACTTTCGGCCATTTTCGTCGC
GTGATTGTTATATCATGTGATCACGTGACTGGTCGGTCCCCTGCACAAGG
AGTAAGGGCTCTCGACGGAGCCGGATAAGGCCAGCGCCATTTTGCCAGCG
ATCGAGTTGTACGGTGTGAATCTTGTAGCCGTCAGCACTTCAATTGAATA
CCTGCGGTACATTTGATCACTGCCCCGAGAAGTGCAGCTACACTTGTTGG
GGTGACGAAGCTGGCGCTTCTGAGGGCCTGGAGCATACGAACACGGCAGG
AGGCTCTCTTGAGCTATCGGCACGCGTGGCGCAGGTACCGCGAAATTGGA
CCGGCAATGTTTCACGGTAGCATCGGCGAAGGTACACTTTTGGACCGGTA
GAGGTGTACGTTGTACACTCGATTAGACCGACAGAGGTACACGATAGGAC
TGATAAAGGTACGCGTTAGGATCGGCACAGGTAAACGGTTGGAGAGAAAG
AGATATGCGATTGGGCCGGCAAGGTTACACGATAGAACCATCCGAGGTTT
ACAGTTGGACCGGCTGATGTACGACTGGACCAGGGCTACGGTGTCACACG
AGTGAAACGGTTTCAAACGTGCAGGTAACAATAACACGAGACGCCTGTCT
TGAATGACAGTGCACATTGTTCCAGTGGCAGGAAAAAGCGGGAGGGAAAT
ATGTCTGCATGCACTGGATCTGCCAATGAGCTGTTCATCCGCGCAAGGCC
ACAGGGTTTCAAGTGCCATTTGTGCTGTACACTGCAGTACAGGAACTTCT
TCATTCTCCGTTTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig15:211245..218008+

>mRNA_P-fluviatile_contig15.2370.1 ID=mRNA_P-fluviatile_contig15.2370.1|Name=mRNA_P-fluviatile_contig15.2370.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2076bp|location=Sequence derived from alignment at P-fluviatile_contig15:211245..218008+ (Porterinema fluviatile SAG_2381)
ATGCGTGTAATCGCATTCGTGCTCATCGCCCTGGTTTCGGCTTCGCCGGC
TAGCAGCTTCGTGGGCATCTCCACGCCGTCGGTCTTGGCAGGTTCGACCC
ATCCTGCAGCAGCAGCAGCTACAGCAGCAGCACGACGGCCTGTGAATGCG
ATCCTTGCAGCAGCAGCTCGGCGACCGCTAGCCGACAGCAGGGAGGCCGC
TCTCGTAGGCAATGTCTACAGAGTGGCGCGAGGTGGAGGAGGGGATGGGC
CAGAGGGTGGCGCAATGGGATACGCCGCTTGTTTGCCGCTTTTGCAGGTC
CTTCCTCCGCCGATGCGTGTAATCGCATTCGTGCTCATCGCCCTGGTTTC
GGCTTCGCCGGCTAGCAGCTTCGTGGGCATCTCCACGCCGTCGGTCTTGG
CAGGTTCGACCCATCCTGCAGCAGCAGCAGCTACAGCAGCAGCACGACGG
CCTGTGAATGCGATCCTTGCAGCAGCAGCTCGGCGACCGCTAGCCGACAG
CAGGGAGGCCGCTCTCGTAGGCAATGTCTACAGAGTGGCGCGAGGTGGAG
GAGGGGATGGGCCAGAGGGTGGCGCAATGGGATACGCCGCTTGTTTGCCG
CTTTTGCAGGTCCTTCCTCCGCCGGTGCAGACGTCGCTAGTCGTGAACAC
CTTGGGGTTCGGCGTGCTCGAGGCTACGGGCAAACGCGGCTCAATCCTCA
CCAAGTCGGGGGCCTTCAGCGCCTACTTACTGGGGCTGGTGCTATGGACG
ACGCTCGGCGCGTGGGGTTGGGGAACGTGCGTGTTGTATCTCGCGGCGGG
GTCCGCGGTCACGAAGATCAAGATGAAAGAGAAAGAGGTGCAGACGTCGC
TAGTCGTGAACACCTTGGGGTTCGGCGTGCTCGAGGCTACGGGCAAACGC
GGCTCAATCCTCACCAAGTCGGGGGCCTTCAGCGCCTACTTACTGGGGCT
GGTGCTATGGACGACGCTCGGCGCGTGGGGTTGGGGAACGTGCGTGTTGT
ATCTCGCGGCGGGGTCCGCGGTCACGAAGATCAAGATGAAAGAGAAAGAG
TCGCTGGGTATCGCCGAGGGGAGAGGAGGGGCCAGAGGGCCTGAGAACGT
TTGGGGGTCTGCCGCCACAGTCGCTGGGTATCGCCGAGGGGAGAGGAGGG
GCCAGAGGGCCTGAGAACGTTTGGGGGTCTGCCGCCACAGGGGCAATGTG
TGCCATCGCATCCAGCATCTGGCCTCGGTTGTCGGGGCCTCTGAGGGTCG
GCTACGTGGCGTCGCTCGCGACCAAGCTTTCGGACACTTTCGCGAGCGAG
ATCGGCAAGGGGCAATGTGTGCCATCGCATCCAGCATCTGGCCTCGGTTG
TCGGGGCCTCTGAGGGTCGGCTACGTGGCGTCGCTCGCGACCAAGCTTTC
GGACACTTTCGCGAGCGAGATCGGCAAGGCATACGGCAAACGAACATTCC
TCATCACGACGTTGAAACCCGCCCCTCCCGGCACGGAAGGGGCGGTTAGC
CTCGAGGGGACCCTGGCCGGCGTATTCGGGTCCATCATCATCTCCGGCTT
TGCGGCAGCGGGTGGGGTCGTCTCCGCAAAGGCATACGGCAAACGAACAT
TCCTCATCACGACGTTGAAACCCGCCCCTCCCGGCACGGAAGGGGCGGTT
AGCCTCGAGGGGACCCTGGCCGGCGTATTCGGGTCCATCATCATCTCCGG
CTTTGCGGCAGCGGGTGGGGTCGTCTCCGCAAAGGCTTTTCCCTCCTGCA
TGATCGCGGCCTTCGTGGCCACCAACTTCGAGAGCTTCCTCGGCGCTACT
ACACAGGGGAAGCTGCCGTGGCTCACCAACGAGGCTTTTCCCTCCTGCAT
GATCGCGGCCTTCGTGGCCACCAACTTCGAGAGCTTCCTCGGCGCTACTA
CACAGGGGAAGCTGCCGTGGCTCACCAACGAGGTGGTGAACTTTATCAAC
ACAGTCGTTGGTGCCGCTGTCGGAGCCGGCCTTGGGCTAGCATGCAAAGT
CTAGGTGGTGAACTTTATCAACACAGTCGTTGGTGCCGCTGTCGGAGCCG
GCCTTGGGCTAGCATGCAAAGTCTAG
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