prot_P-fluviatile_contig15.2356.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig15.2356.1
Unique Name	prot_P-fluviatile_contig15.2356.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	306

Homology

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BLAST of mRNA_P-fluviatile_contig15.2356.1 vs. uniprot
Match: A0A6H5JJ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ87_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 4.140e-8
Identity = 71/250 (28.40%), Postives = 113/250 (45.20%), Query Frame = 0

Query:   64 RDTRAIFRQRMVAHAQAVLLSLLGVALTFTSWHDHEG-PFS-LVERLGRQCVGMKFVGLLFALFVALGAFRKGGVDNGCAGPPILMVWGATAAGLDPSMFCLALCGFSI------ISPKPVNF--DGFLAMTGQMMLSMPVVMFFLVFTIPTALHSQKLLSDAAQHSPV--RCCPGGPWYQVLLRVCSVVLALYTIVSPIVVYISESAVLFRSKSSGAADYILAVLDLIVVIPALPFVGSFVYRIIPVMW 301
            R T+   R+ ++++    LL+L+   L+  +    +G  F+ L E +      MKFVGLLFAL +A+GA+  G    G  G P+ MVW A     D  M    + GF         S    NF  D  +   G M L+   V F  +       H Q L    +  S     C         +L +  +++ L  +++P+ +   ES +LF S +    D +LA++D+ +   A+PFV SF+   +P MW
Sbjct:   24 RGTKDFQRRAVISN----LLTLVEFVLSLVNAVKRDGFQFATLTEFVFVTSAAMKFVGLLFALVLAVGAYMAGRYRFGNGGSPLAMVWMAKRKNDDFLMRTAVITGFGAQALAVWASAVAYNFASDAGIPAGGGMFLAS--VFFLRMIIYACHRHGQLLPRPTSDPSATTDECS--------ILALGHLIVLLVALIAPLAIEAIESVLLF-SMTESPEDIVLAIIDVGLSFGAIPFVCSFLGNELPEMW 258

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig15.2356.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig15.2356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JJ87_9PHAE	4.140e-8	28.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 230..252
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 272..297
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 210..229
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..93
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 132..142
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 171..189
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 190..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 143..170
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 94..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 113..131
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 298..306
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 253..271
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 111..128
None	No IPR available	TMHMM	TMhelix		coord: 149..171
None	No IPR available	TMHMM	TMhelix		coord: 181..203
None	No IPR available	TMHMM	TMhelix		coord: 240..262
None	No IPR available	TMHMM	TMhelix		coord: 272..294

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig15	contig	P-fluviatile_contig15:90851..91768 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig15.2356.1	mRNA_P-fluviatile_contig15.2356.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig15 89962..91768 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig15.2356.1 ID=prot_P-fluviatile_contig15.2356.1|Name=mRNA_P-fluviatile_contig15.2356.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=306bp
MVLARWEGNKDGWNLDSTLTLFYRARSIFLIAGTDNKKRAEGKGPPEMST
ADEERVALNVDNGRDTRAIFRQRMVAHAQAVLLSLLGVALTFTSWHDHEG
PFSLVERLGRQCVGMKFVGLLFALFVALGAFRKGGVDNGCAGPPILMVWG
ATAAGLDPSMFCLALCGFSIISPKPVNFDGFLAMTGQMMLSMPVVMFFLV
FTIPTALHSQKLLSDAAQHSPVRCCPGGPWYQVLLRVCSVVLALYTIVSP
IVVYISESAVLFRSKSSGAADYILAVLDLIVVIPALPFVGSFVYRIIPVM
WGGDLT