prot_P-fluviatile_contig1.144.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.144.1
Unique Nameprot_P-fluviatile_contig1.144.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length175
Homology
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BLAST of mRNA_P-fluviatile_contig1.144.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.360e-93
Identity = 146/174 (83.91%), Postives = 160/174 (91.95%), Query Frame = 0 
Query:    1 MAGVVRTSPHLPSVTAVSVDTLFLVVMVCLLVEVVAGFVVWRTSRVTRTEAAMVLQRQTLRAGVAKTNFISTFVENSKLKRLLLKVEKDLERTQAVRERRHKSAAKAVRAVRMCVYGSMVMLMWGRPLISFSPDYLWPSCFSHAVSGGRAAGSVGALSIVAMFVFGLVPRFSPS 174
            MAG+V  SPHLPSV AVSVDTLFLVVM+C LVEVVAGFV+W+TSRVTRTEAA++ QRQTLR GVAKTN+ +TFVENSKLKRLLLK EKDLER Q+ R+RR KS AKAVRAVR+CVYGSMV+LMWGRPLISFSPDYLWPS FSHA+SGGRAAGSVGALSIVAMF+FGLVPR SPS
Sbjct:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPS 174
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BLAST of mRNA_P-fluviatile_contig1.144.1 vs. uniprot
Match: A0A835YKR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 9.230e-21
Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 0 
Query:    8 SPHLPSVTAVSVDTLFLVVMVCLLVEVVAGFVVWRTSRVTRTEAAMVLQRQTLRAGVAKTNFISTFVENSKLKRLLLKVEKDLERTQAVRERRHKSAAKAVRAVRMCVYGSMVMLMWGRPLISFSPDYLWPSCFSHAVSGGRAAGS----VGALSIVAMFVFGLVPRFSPS 174
            S  LP+V A++   L L ++VC++VE+++G       R T+ E         L+  + KTN+   FVENSKL+R L+KVEK+LER +  R  R     +  R +R+  YG++V   WG+  I F+P Y+ P     AV+GG   G+    V    +V +F +GL  RF  S
Sbjct:    4 SAALPAVLAINPVGLILAILVCVIVELISGIAHAMAGRRTQAEVTYSEDVALLKVEIVKTNYPEKFVENSKLQRQLIKVEKELERLRGERAARRTKVQRWTRWLRLAAYGALVAAHWGQTAIRFTPAYVTPL---GAVAGGPLQGTPQGGVSIAGVVVLFWWGLGGRFGSS 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9E7_ECTSI1.360e-9383.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKR9_9STRA9.230e-2136.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..109
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 22..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1911087..1915912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.144.1mRNA_P-fluviatile_contig1.144.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 1910960..1916695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.144.1 ID=prot_P-fluviatile_contig1.144.1|Name=mRNA_P-fluviatile_contig1.144.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=175bp
MAGVVRTSPHLPSVTAVSVDTLFLVVMVCLLVEVVAGFVVWRTSRVTRTE
AAMVLQRQTLRAGVAKTNFISTFVENSKLKRLLLKVEKDLERTQAVRERR
HKSAAKAVRAVRMCVYGSMVMLMWGRPLISFSPDYLWPSCFSHAVSGGRA
AGSVGALSIVAMFVFGLVPRFSPS*
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