mRNA_P-fluviatile_contig14.2334.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2334.1 vs. uniprot
Match: D8LF96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF96_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 4.950e-139 Identity = 233/363 (64.19%), Postives = 271/363 (74.66%), Query Frame = 1
Query: 67 MQTLDGADGIHGDQALSSTSLADNVLAGTPVGPLAFAGIVPVHGKYLFDRRGRQKVGVSWGEQAIDGIKYDSVELVRSALRQEFSNPEERLEASGPAGAPFSFANAAIFTQEQMDRVVDDLRVCTREINAGAKRFVSDSEWVSIDQALGDTGTYASVFMSRATGGDTGLHIAVTLGRLRAAQVMELVQRIAQLEEDASRRGATARRLTAEEKACLAQQERVVNKANEYRVFAHGLACYFVDRLAYWDILKDDSRVCEIEGRDMPPGAEEELRLCEAMFSYLQQCEAIRDREHDSLPPLSPETLELKANRFTGVLTPRGGKEGRGGRRRRPRNPENVGV--RAAPTVGANASLATRMELCRQGT 1149
M+ +G D + + S + +L G V PLA+AG VPVH L DRRGRQKV V WG Q I GIK+DSVELVR ALR EFSNPEERLE SGPAGA FSFANAAIFTQEQMDRVVDDL++ TRE NA KRFVSDSEW++IDQ LG+TGTYASV MSRATGGDTGLHIA+TLG LRAAQVMELV RIAQLEED SR+G TARRLTA EKA LAQ +RVV+KANEYR+F HGLACYFVDRL+ W L++++R CEIEGR+M P M YL+QCEAIRDREH+ LPPL+ E L+ KA+RFTGVL P+G + G GG RR+ + + G R + GANA ++ RM L G+
Sbjct: 1 MRGSEGMDSPSRSELFDAKSANERLLDGARVTPLAYAGFVPVHPSCLLDRRGRQKVSVMWGAQVIQGIKHDSVELVRGALRHEFSNPEERLEDSGPAGAAFSFANAAIFTQEQMDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQVMELVLRIAQLEEDFSRKGITARRLTAAEKASLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQEEARACEIEGREMLPXXXXXXXXXXVMCRYLEQCEAIRDREHEILPPLTLEDLDSKADRFTGVLDPKG-EGGSGGIRRQEDSGGHSGSQDRVTLSAGANAIMSARMALSIMGS 362
BLAST of mRNA_P-fluviatile_contig14.2334.1 vs. uniprot
Match: A0A6H5L644_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L644_9PHAE) HSP 1 Score: 370 bits (949), Expect = 6.690e-116 Identity = 238/507 (46.94%), Postives = 277/507 (54.64%), Query Frame = 1
Query: 67 MQTLDGADGIHGDQALSSTSLADNVLAGTPVGPLAFAGIVPV---HGKYLFDRRGRQKVGVSWGEQAIDGIKYDSVELVRSALRQEFSNPEERLEASGPAGAPFSFANAAIFTQEQMDRVVDDLRVCTREINAGAKRFVSDSEWVSIDQALGDTGTYASVFMSRATGGDTGLHIAVTLGRLRAAQV--------------------------------------------------------------------------------MELVQRIAQLEEDASRRGATARRLTAEEK----------------------------------------ACLAQQERVVNKANEYRVFAHGLACYFVDRLAYWDILK-------------------DDSRVCEIEGRDMPPGAEEELRLCEAMFSYLQQCEAIRDREHDSLPPLSPETLELKANRFTGVLTPRGGKEGRGGRRRRPRNPENVGV-----RAAPTVGANASLATRMELCRQG 1146
M+ +G D + + + S +++L V PLA+AG VPV H L DRRGRQKV V WG Q I GIK+DSVELVR ALR EFSNPEERLE SGPAGA FSFANAAIFTQEQMDRVVDDL++ TRE NA KRFVSDSEW++IDQ LG+TGTYASV MSRAT GDTGLHIA+TLG LRAAQV MELV R AQLEED SR+G TARRLTA EK A LAQ +RV +KANEYR+F HGLACYFVDRL+ W L+ +++R CEIEGR+M P A+ ELRLCE M YL+QCEAIRDREH+ LPPL+PE L+ KA+RFTGVL P+G + G GG R R R ++ G R + GANA ++ RM L G
Sbjct: 1 MRGSEGVDYPNPSELFDAMSANESLLDRARVSPLAYAGFVPVSVVHPSCLLDRRGRQKVSVLWGVQVIQGIKHDSVELVRGALRHEFSNPEERLEDSGPAGAAFSFANAAIFTQEQMDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATSGDTGLHIAITLGSLRAAQVFVEEGCDVTILNDDGVSAVAILRQDGGDKETCFRQTKCIYLQWNLTASEMHNMSSKHPKPAMPSNTLHAPRALSDNFDKVMELVLRTAQLEEDFSRKGITARRLTAAEKVSPATYAANVHAPSFLARRLSVHHTPRGAGTSNATALGAQASLAQLDRVAHKANEYRLFGHGLACYFVDRLSDWPALQARSADHVATAHVNQWLCTDEEARACEIEGREMLPAAQRELRLCEVMCRYLEQCEAIRDREHEILPPLTPEDLDSKADRFTGVLDPKG-EGGSGGSRCRRRQEDSGGHSSSQDRVTLSAGANAIMSARMALSIMG 506 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2334.1 >prot_P-fluviatile_contig14.2334.1 ID=prot_P-fluviatile_contig14.2334.1|Name=mRNA_P-fluviatile_contig14.2334.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=616bp WTPFLPAELRNFNVVRDIRGVTMQTLDGADGIHGDQALSSTSLADNVLAGback to top mRNA from alignment at P-fluviatile_contig14:2972016..2980469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2334.1 ID=mRNA_P-fluviatile_contig14.2334.1|Name=mRNA_P-fluviatile_contig14.2334.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8454bp|location=Sequence derived from alignment at P-fluviatile_contig14:2972016..2980469- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2972016..2980469- >mRNA_P-fluviatile_contig14.2334.1 ID=mRNA_P-fluviatile_contig14.2334.1|Name=mRNA_P-fluviatile_contig14.2334.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3696bp|location=Sequence derived from alignment at P-fluviatile_contig14:2972016..2980469- (Porterinema fluviatile SAG_2381)back to top |