mRNA_P-fluviatile_contig14.2307.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2307.1
Unique NamemRNA_P-fluviatile_contig14.2307.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2697907..2699286 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size502
Cds size501
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815633.0739934-CDS-P-fluviatile_contig14:2697907..26981021622815633.0739934-CDS-P-fluviatile_contig14:2697907..2698102Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2697908..2698102 -
1693562595.3360863-CDS-P-fluviatile_contig14:2697907..26981021693562595.3360863-CDS-P-fluviatile_contig14:2697907..2698102Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2697908..2698102 -
1622815633.0882974-CDS-P-fluviatile_contig14:2698980..26992861622815633.0882974-CDS-P-fluviatile_contig14:2698980..2699286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2698981..2699286 -
1693562595.3451157-CDS-P-fluviatile_contig14:2698980..26992861693562595.3451157-CDS-P-fluviatile_contig14:2698980..2699286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2698981..2699286 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2307.1prot_P-fluviatile_contig14.2307.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2697908..2699286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2307.1

>prot_P-fluviatile_contig14.2307.1 ID=prot_P-fluviatile_contig14.2307.1|Name=mRNA_P-fluviatile_contig14.2307.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=167bp
ASCVSIQRLCRPLKQYLLRGEVQIVFPPASSFLKLWGLGPINNQRAPAAF
SVDGGRWCGERGGLGVHACPMEDLRQRLGGVKIGGVTVEQMSEIDWRFAE
MKFKGVNDNNGGDDDDVDDDDDEVAETGARFGDLRFVASPDKFETASPIR
PIPASSKGPVGISQPQD
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mRNA from alignment at P-fluviatile_contig14:2697907..2699286-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2307.1 ID=mRNA_P-fluviatile_contig14.2307.1|Name=mRNA_P-fluviatile_contig14.2307.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1380bp|location=Sequence derived from alignment at P-fluviatile_contig14:2697907..2699286- (Porterinema fluviatile SAG_2381)
GCCAGCTGTGTGTCTATCCAGCGGCTTTGCCGGCCTCTGAAGCAGTACCT
ACTCAGGGGAGAGGTCCAGATTGTATTCCCTCCAGCCTCGTCATTTTTAA
AACTCTGGGGCTTGGGCCCTATCAACAACCAGCGAGCTCCGGCTGCATTC
TCCGTCGACGGGGGTCGCTGGTGCGGAGAGCGCGGAGGATTGGGGGTGCA
TGCCTGCCCAATGGAGGATTTGCGACAGAGGCTGGGAGGGGTGAAGATTG
GTGGCGTAACTGTGGAGCAGATGTCCGAGATCGATTGGAGATTTGCCGAG
ATGAAGGTGGCCGAAAGTCTTGCCTCTTGGGGATTGTGTGAAGTTGAAAC
GCGGCTCCAGCGAGTCACGGCAGGGGGCCGATGGGGTGTGTCTCCTATCA
AACTGCCGACGCGTCGTAGGTCGGTCTCGCGTTGTTTCCAGGGCGTTTCT
GAGAAAGATTCGCGACGCACGCCTTCCGTCGTGACAAGCGTTCGTCAGAA
TTTTCCCCTGTTAGATGGGAGGTGGACTACATTTTGTATTGCGGCGGGTA
CGGCCGGGATCCATCCACTCGCTCTCCTTCTCCTTTGAGCTCTGTCGTCA
CACATCCACGGTCTGTTCCTGAACACAAATGGCACGCCGCTTCAAGAGTG
GACGCCCTCGTCTATGGTGTCCTCGCATTTTATATTTCTTACGGTATGAA
AGGGGACGATGTCGCGCGACCGCGGATTTTTGCCCACTTCCTCTCAAGGT
GACGTGATGTAGGCTGCCTGGCTAATGGTGATCGCCTTACACCGTCCGGC
ATTGCCGAACACGTGCCCAGCCAAAAGAGAAGCTTCTCTTACATGGATCC
ACATTACCTTCTTTTCCACGATGGATGCCGCCCGGTGTGGTGACGACTTG
AAAATGTATGGGAACCGGCCGAAAACTTGCTAATAGTATGTCAATGTGTG
ATACGTTCGCCCTGTGTCGAAAGCTCGTACAGCCGCACGGGCCAGCAGTC
GTGCTACCAAGAGGAGACGGGGGGGACGGAACAGAACGACTACCACGTTC
ATGCGTATAACATCAGCCGGAGCGCGTCACGTGCGGCTTTCCCCCCCCAT
ACTGTTGTATTTCGCTGCCCACATACCCCATGACACCCGTCTTTCCTCTC
ATGCCCCCGTATCTCCCGGACCCGACTTTCTTAGTTCAAGGGGGTCAACG
ACAATAACGGAGGCGACGACGACGACGTCGACGACGATGATGACGAAGTT
GCCGAGACCGGCGCGCGTTTCGGAGACCTTCGGTTCGTTGCGTCCCCCGA
CAAATTCGAAACCGCGTCGCCAATCCGTCCGATCCCCGCTTCATCCAAGG
GGCCCGTCGGCATCTCTCAGCCTCAGGACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2697907..2699286-

>mRNA_P-fluviatile_contig14.2307.1 ID=mRNA_P-fluviatile_contig14.2307.1|Name=mRNA_P-fluviatile_contig14.2307.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1002bp|location=Sequence derived from alignment at P-fluviatile_contig14:2697907..2699286- (Porterinema fluviatile SAG_2381)
GCCAGCTGTGTGTCTATCCAGCGGCTTTGCCGGCCTCTGAAGCAGTACCT
ACTCAGGGGAGAGGTCCAGATTGTATTCCCTCCAGCCTCGTCATTTTTAA
AACTCTGGGGCTTGGGCCCTATCAACAACCAGCGAGCTCCGGCTGCATTC
TCCGTCGACGGGGGTCGCTGGTGCGGAGAGCGCGGAGGATTGGGGGTGCA
TGCCTGCCCAATGGAGGATTTGCGACAGAGGCTGGGAGGGGTGAAGATTG
GTGGCGTAACTGTGGAGCAGATGTCCGAGATCGATTGGAGATTTGCCGAG
ATGAAGGCCAGCTGTGTGTCTATCCAGCGGCTTTGCCGGCCTCTGAAGCA
GTACCTACTCAGGGGAGAGGTCCAGATTGTATTCCCTCCAGCCTCGTCAT
TTTTAAAACTCTGGGGCTTGGGCCCTATCAACAACCAGCGAGCTCCGGCT
GCATTCTCCGTCGACGGGGGTCGCTGGTGCGGAGAGCGCGGAGGATTGGG
GGTGCATGCCTGCCCAATGGAGGATTTGCGACAGAGGCTGGGAGGGGTGA
AGATTGGTGGCGTAACTGTGGAGCAGATGTCCGAGATCGATTGGAGATTT
GCCGAGATGAAGTTCAAGGGGGTCAACGACAATAACGGAGGCGACGACGA
CGACGTCGACGACGATGATGACGAAGTTGCCGAGACCGGCGCGCGTTTCG
GAGACCTTCGGTTCGTTGCGTCCCCCGACAAATTCGAAACCGCGTCGCCA
ATCCGTCCGATCCCCGCTTCATCCAAGGGGCCCGTCGGCATCTCTCAGCC
TCAGGACTTCAAGGGGGTCAACGACAATAACGGAGGCGACGACGACGACG
TCGACGACGATGATGACGAAGTTGCCGAGACCGGCGCGCGTTTCGGAGAC
CTTCGGTTCGTTGCGTCCCCCGACAAATTCGAAACCGCGTCGCCAATCCG
TCCGATCCCCGCTTCATCCAAGGGGCCCGTCGGCATCTCTCAGCCTCAGG
AC
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