prot_P-fluviatile_contig14.2277.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2277.1
Unique Nameprot_P-fluviatile_contig14.2277.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length548
Homology
BLAST of mRNA_P-fluviatile_contig14.2277.1 vs. uniprot
Match: D7FNQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ8_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 9.210e-161
Identity = 292/557 (52.42%), Postives = 334/557 (59.96%), Query Frame = 0
Query:    1 MDGVIAIKRTQLALILMGMFVVACVPVVSVVVLKFFFSVRLRSRLLNDDCKRFTGVFFVLATKAIFIPALCGGGRLCERRVHTLMTDDHDGDAGGRQGHRRRKNHAH-ENETHYREEGGDGREERPTGLPRAPHGGGASKRQPATPPGVEGEGGSGGTGEEDRRAGRVVNDSSN-RTVLDLPPRHWMCIVCKKVNVLPEDWTGRAAKVVQVVIKRKEVDKRAMYGAFRAKPGFPSCRKCQTPFNYSFRNGGGLDQTPRQQRGREVLEAALSRPATAARTR-------RPVPSATVEGXXXXXXXXXXXXSPASGVLARVLKKVARFLHAFASRSQRRRDKDMLIDAGGXXXXXEPGGAGDEPAEPELWYGRDFRRQLKTYFKPQLERPSLSPPLARXXXXXXXXXXXXXDRYPVGARVACFAGKGAWYPGAVTASRENNTYDVRYDNGDIVQHVFSHMIRFEPTRTDSFLLCCYYGLALAAAGAWPLAGSWYFTSTSAPDTTDEVSSGTGTAAAIVALPALLVGVAGVFAVAVQFYGIHAEIRSAGLCITAKFAAIF 548
            MDG I ++RT LA +L+ MF  A VP V   VLK FFSVRLRS L+ DD +RF GVFF LATKA+ +PA CGGGRLCERRVH L  D    D         R N A  E     +  GGD +EE    L RAP GG + +R                       A R+ +  +  RT LDLPPRHWMC VCKKVN+LP++W GRA K V VVIKRK VD RAMYG F+ KPG P C KC+TPFNYS+RNGGG D    QQR + +L+AALSRP  AA T         P  SA V+G              A+ V  RVL K ARF+ A  S  +RRR               +  G  D   EPELWYGR+FRRQL TYFKP+L RP+                    +RYPVGARVACFAGK AWYPGAV ASREN+TYDVRYDNGDI QHVFSHMIRFEP   DS L CCYYGLALAAA AWPLAGSWYF+STSA                 VALPAL+VG AG  AVA QF+ I+A+ RS GLC+  KFAA++
Sbjct:    1 MDGAIPVERTHLAALLLVMFAAAAVPAVLAAVLKMFFSVRLRSSLVRDDRRRFVGVFFFLATKAVSVPAFCGGGRLCERRVHALKDDATSTDXXXXXXXXXRDNEAALERGGGGKTIGGDAQEE--GDLQRAPLGGSSGRRXXXXXXXXXXXXXXXXXXXXXXSANRLADGGTRKRTELDLPPRHWMCTVCKKVNMLPDEWNGRAGKDVHVVIKRKAVDTRAMYGLFKTKPGVPLCSKCRTPFNYSWRNGGGSDNLM-QQRQQRLLDAALSRPTNAASTAVAAGSATDPALSAAVDGPMDAENGGVA----AAAVHRRVLAKAARFIRALCSPCRRRRAASSK--------PFDGRGGSDAVEEPELWYGREFRRQLMTYFKPELSRPAAG-----------------GERYPVGARVACFAGKDAWYPGAVAASRENDTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAAXXXXXXXXX------XVALPALVVGTAGTLAVAFQFWEIYADNRSTGLCVATKFAAVW 519          
BLAST of mRNA_P-fluviatile_contig14.2277.1 vs. uniprot
Match: A0A6H5L3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X8_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 5.670e-112
Identity = 206/358 (57.54%), Postives = 232/358 (64.80%), Query Frame = 0
Query:  194 VLPEDWTGRAAKVVQVVIKRKEVDKRAMYGAFRAKPGFPSCRKCQTPFNYSFRNGGGLDQTPRQQRGREVLEAALSRPATAARTRRPVPSAT---VEGXXXXXXXXXXXXSPASGVLARVLKKVARFLHAFASRSQRRRDKDMLIDAGGXXXXXEPGGAGDEPAEPELWYGRDFRRQLKTYFKPQLERPSLSPPLARXXXXXXXXXXXXXDRYPVGARVACFAGKGAWYPGAVTASRENNTYDVRYDNGDIVQHVFSHMIRFEPTRTDSFLLCCYYGLALAAAGAWPLAGSWYFTSTSAPDTTDEVSSGTGTAAAIVALPALLVGVAGVFAVAVQFYGIHAEIRSAGLCITAKFAAIF 548
            +LP++W GR  K V VVIKRK VD RAMYG F+ KPG P C KC TPFNYS+RNGGG D+   QQR + +L+AALSRP +AA T     SAT   +                A+ V  RVL K ARF+    S+ +RRR        G        GGA D   EPELWYGR+FRRQL TYFKP+L RP+ S                   RYPVGARVACFAGK AWYPGAV ASRENNTYDVRYDNGDI QHVFSHMIRFEP   DS L CCYYGLALAAA AWPLAGSWYF+STSA   TD  +S    AAA+VALPAL+VG AG  AVA Q + I+A+ RS GLC+  KFA IF
Sbjct:    1 MLPDEWDGRTGKDVHVVIKRKAVDTRAMYGLFKTKPGVPLCSKCHTPFNYSWRNGGGSDKLM-QQRQQRLLDAALSRPTSAASTAVAAGSATDPALSAAADGLMNAENGGVAAAAVHRRVLAKAARFIRGIYSQCRRRRAASSKTFDG-------RGGA-DAVEEPELWYGREFRRQLMTYFKPELSRPAAS-----------------GGRYPVGARVACFAGKDAWYPGAVAASRENNTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAA--TDAATS----AAALVALPALVVGTAGTLAVAFQIWEIYADNRSTGLCVATKFAVIF 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNQ8_ECTSI9.210e-16152.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3X8_9PHAE5.670e-11257.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 396..456
e-value: 1.0E-9
score: 39.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 485..503
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..458
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 459..484
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 504..527
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 528..548
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 460..482
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 502..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2403366..2405724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2277.1mRNA_P-fluviatile_contig14.2277.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 2403366..2405724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2277.1 ID=prot_P-fluviatile_contig14.2277.1|Name=mRNA_P-fluviatile_contig14.2277.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=548bp
MDGVIAIKRTQLALILMGMFVVACVPVVSVVVLKFFFSVRLRSRLLNDDC
KRFTGVFFVLATKAIFIPALCGGGRLCERRVHTLMTDDHDGDAGGRQGHR
RRKNHAHENETHYREEGGDGREERPTGLPRAPHGGGASKRQPATPPGVEG
EGGSGGTGEEDRRAGRVVNDSSNRTVLDLPPRHWMCIVCKKVNVLPEDWT
GRAAKVVQVVIKRKEVDKRAMYGAFRAKPGFPSCRKCQTPFNYSFRNGGG
LDQTPRQQRGREVLEAALSRPATAARTRRPVPSATVEGGGGGSDDDNGGG
SPASGVLARVLKKVARFLHAFASRSQRRRDKDMLIDAGGGRGEGEPGGAG
DEPAEPELWYGRDFRRQLKTYFKPQLERPSLSPPLARGGGRTDGGDGGDG
DRYPVGARVACFAGKGAWYPGAVTASRENNTYDVRYDNGDIVQHVFSHMI
RFEPTRTDSFLLCCYYGLALAAAGAWPLAGSWYFTSTSAPDTTDEVSSGT
GTAAAIVALPALLVGVAGVFAVAVQFYGIHAEIRSAGLCITAKFAAIF
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