mRNA_P-fluviatile_contig14.2214.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2214.1
Unique NamemRNA_P-fluviatile_contig14.2214.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 4.900e-91
Identity = 177/220 (80.45%), Postives = 198/220 (90.00%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGDRSATSGWTMXXXXXXXXXXXXXXXXXXXXXXXXASGDTSGMSSRFTGGRR 2499
            A+EWIEDVTG  F  GFGEEL+DGR+LC LIN+IKPG VR+VN+S+MPFKQMEN+SNFLKACR+VGVAEHSLFETVDLYE KDLGLVVRCLHALGQTVQNSCP+Y GPRLG++QTEANKREWT EQQ+QQ+ NSSG +S L+AGSSKTMER  I+K+G TFGAAQ+GTGDR+ TSGWTMXXXXXXXXXXXXXXXXXXXXXX  ASGD +G SSRFT G R
Sbjct:  368 AQEWIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLRNSSGAMSNLLAGSSKTMERATILKTGATFGAAQSGTGDRAGTSGWTMXXXXXXXXXXXXXXXXXXXXXXAGASGDKTGASSRFTAGHR 587
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: D7FNP0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP0_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.470e-73
Identity = 159/262 (60.69%), Postives = 184/262 (70.23%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESK--MPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCL----------------------------------------HALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGDRSATSGWTMXXXXXXXXXXXXXXXXXXXXXXXXASGDTSGMSSRFTGGRR 2499
            A+ W+E VTG    G F + LRDG RLC+L+N IKP  VR+VN  K    FKQMENISNF++ CR++GV E+SLFETVDLYE KD+GLVV+CL                                        HALGQTVQNSCP+Y GPRLG++QTEANKREWT EQQ+QQ+ NSSG +S L+AGSSKTMER  +IK+G TFGAAQ+GTGDR+ TSGWTMXXXXXXXXXXXXXXXXXXXXX   ASGD +G SSRFT G R
Sbjct:   21 AQAWVEQVTGEPLEGDFADGLRDGVRLCKLLNTIKPSSVRRVNPFKEGQKFKQMENISNFIRGCRAIGVPEYSLFETVDLYEGKDVGLVVKCLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLRNSSGAMSNLLAGSSKTMERATVIKTGATFGAAQSGTGDRAGTSGWTMXXXXXXXXXXXXXXXXXXXXXYAGASGDKTGASSRFTAGHR 282
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.600e-56
Identity = 105/170 (61.76%), Postives = 130/170 (76.47%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGD 2349
            AR WIE VTG   +G FG+ LRDG  +C+L+N IKPG VRK+NES+MPFKQMENISNFLK+CR++GVAEHSLFETVDLYE KD+GLVVRC+ ALG  VQ +CP+Y GP LG +  + NKR +  EQ++Q  +N+S   S+L  GS+ +MER  I K G+ FGA  AGTGD
Sbjct:   33 ARAWIEAVTGERVVGPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGAKPHQENKRIFNEEQKQQAKVNAS--FSKLGMGSAHSMERSQISKPGICFGAENAGTGD 200
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.560e-56
Identity = 103/173 (59.54%), Postives = 134/173 (77.46%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGDRSA 2358
            A+EW+E VTG  F G F   L+DG  LC+LIN IKPG ++++N SKMPFKQMENISNFLKACR++GVAE+SLFETVDL+E+KD+GLV+RCL ALG  VQ+S P++ GP LG +   ANKRE+TAEQ RQ  L+++  +++ M GS+  MER  I+K+G+T GA  AG GD S+
Sbjct:   30 AQEWMEAVTGVKFEGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLGAKPHTANKREFTAEQMRQARLDTT--MTKAMQGSAAVMERLPIVKTGITAGAEYAGIGDTSS 200
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 4.700e-51
Identity = 97/170 (57.06%), Postives = 123/170 (72.35%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGD 2349
            A+EWIE VT   F G F   L+DG  LC+L+N I+PG V+K+N S MPFKQMENIS +LK CR++GVAEHSLFETVDLYE+KD+ LV++CL ALG T+Q+S P++ GP LG +   ANKRE+TAEQ  +  L   G I++   GS+  MER  + K G+T GA  AGTGD
Sbjct:   31 AQEWIEAVTRVKFEGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGAKMHTANKREFTAEQMAKARLG--GAITKQTQGSAAVMERLHVTKGGITMGAEYAGTGD 198
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A7S1U3T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3T7_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.910e-48
Identity = 95/169 (56.21%), Postives = 123/169 (72.78%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTG 2346
            A++WIE++TG AF GGFGE L+DGR LC  IN IKPG +R+VN SK+PFKQMEN+S FL++CR++GVAEH LFETVDLYE KDLGLVV+C+HALG+ V+ S P Y GP LG ++   N+R +TAEQ   Q  N++ + ++L  GS+ TMER  +     T G    G G
Sbjct:    2 AQQWIEELTGEAFPGGFGESLKDGRLLCLTINAIKPGTIRRVNASKLPFKQMENVSTFLRSCRTLGVAEHDLFETVDLYELKDLGLVVQCIHALGRAVR-SLPGYSGPTLGPKEATKNQRRFTAEQLSAQRANAA-MATKLTMGSAATMERSEVHYFDATSGNRAVGAG 168
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.730e-40
Identity = 97/212 (45.75%), Postives = 126/212 (59.43%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQT------------------------------------EANKREWTAEQQRQQM-LNSSGVISQLMAGSSKTMERGAIIKSGVTFGAAQAGTGDRSATS 2364
            A+EWIE VTG AF G FGE L+DG+ LC L+N I+ G VRK+NESK+PFKQMENISNFL+ACR++GVAEH +FETVDL+E KDL +VV+C+ ALG+ VQ + P++ GP LGV +T                                    +   R W A    + +    + V+S+L +GSS  MER  I+ SG T G A A  G   AT+
Sbjct:   18 AQEWIEAVTGVAFAGDFGESLKDGQMLCMLVNAIRRGSVRKINESKLPFKQMENISNFLRACRTLGVAEHDVFETVDLFELKDLSVVVKCIWALGRAVQTTVPEFEGPHLGVPETTRTTLSRPSNFDAARPSFTSMATLGRFSMGSAATMQKQENRYWDATSGNRTVGAGDTSVVSKLQSGSSGIMERKKIVVSGPTLG-ADAAAGRAEATN 228
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A2D4CAP3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAP3_PYTIN)

HSP 1 Score: 162 bits (411), Expect = 5.890e-40
Identity = 89/165 (53.94%), Postives = 116/165 (70.30%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVN-ESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSG-VTFGA 2328
            AR+WIE +TG      FGE LRDG  LCEL N+I PG++R++  +SKMPFK MEN+S FLKACR++GV E+ LFETVDL+E K LGLVVRCLHALG+ VQ + P + GP LGV++   N+R++T EQ    +  +    S L  GS +TMER  + ++  VTFGA
Sbjct:   35 ARQWIEAITGREIGASFGEGLRDGVILCELANKIHPGVIRRIETKSKMPFKLMENVSAFLKACRTIGVNEYELFETVDLFELKXLGLVVRCLHALGRAVQKNYPSFNGPTLGVKEAAKNERQFTEEQ----IAQARNAPSLLSLGSMRTMERLDVSRANDVTFGA 195
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A3F2RVG1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVG1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.600e-40
Identity = 87/177 (49.15%), Postives = 122/177 (68.93%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSG-VTFGAAQAGT-GDRSATS 2364
            A+ WIE V    F+  FG+ L+DG  LC L+N++KPG++ K+  S MPFKQMEN+++FL+ACR++GVAE  LFETVDLYE K+LG VV C+HALG+T+Q + P+Y GPRLGV+++  N R+++  Q R+    ++  +  L  GS   MER    +S  VTFG+  +GT GD   TS
Sbjct:  292 AQTWIETVLDEKFLASFGDSLKDGVMLCALMNKVKPGLIPKIQNSTMPFKQMENVTSFLRACRTLGVAEFDLFETVDLYEQKNLGQVVHCIHALGRTLQKNVPEYDGPRLGVKESTVNVRKFSEAQLRE----AASAVPVLAHGSQSVMERLGFDRSASVTFGSDASGTKGDSEKTS 464
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BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Match: A0A662Y5N1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5N1_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.210e-38
Identity = 85/174 (48.85%), Postives = 122/174 (70.11%), Query Frame = 1 
Query: 1840 AREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKVNESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLHALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLMAGSSKTMERGAIIKSG-VTFGAAQAGTGDRSA 2358
            A+ WIE+V    F+  FG+ L+DG  LC L+N+IKPG++ ++  S MPFKQMEN+S+FL+ACRS+GVAE  LFETVDL+E K++G V +C+HALG+T+Q + P+Y GPRLGV+++ AN+R+++  Q R+    ++  +  L  GS   MER A  +S  VTFG   A +G   A
Sbjct:  343 AQVWIEEVLSEKFLASFGDSLKDGVILCTLMNKIKPGLIPRIQNSPMPFKQMENVSSFLRACRSLGVAEFDLFETVDLFELKNVGQVAQCIHALGRTLQKNVPEYDGPRLGVKESTANRRQFSEAQLRE----AATAVPVLAHGSQSVMERRAFDRSASVTFGYDAAISGSNKA 512
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3X7_9PHAE4.900e-9180.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP0_ECTSI6.470e-7360.69Calponin-homology (CH) domain-containing protein n... [more]
D7FJ16_ECTSI1.600e-5661.76Calponin-homology (CH) domain-containing protein n... [more]
A0A835ZHQ8_9STRA4.560e-5659.54Calponin homology domain-containing protein n=1 Ta... [more]
A0A836CGB8_9STRA4.700e-5157.06Calponin homology domain-containing protein n=1 Ta... [more]
A0A7S1U3T7_9STRA2.910e-4856.21Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YD67_9STRA1.730e-4045.75Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2D4CAP3_PYTIN5.890e-4053.94Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3F2RVG1_9STRA6.600e-4049.15Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662Y5N1_9STRA1.210e-3848.85Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1834814..1839075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.9
Seed ortholog evalue4.7e-64
Seed eggNOG ortholog2880.D7FNP0
Preferred nameSCP1
KEGG koko:K20526
GOsGO:0000278,GO:0000281,GO:0000910,GO:0001300,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005938,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007568,GO:0007569,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0022402,GO:0030029,GO:0030036,GO:0030479,GO:0030674,GO:0030863,GO:0030864,GO:0032502,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044877,GO:0048869,GO:0051015,GO:0051301,GO:0051764,GO:0060090,GO:0061640,GO:0061645,GO:0071840,GO:0071944,GO:0097435,GO:0099568,GO:1903047
EggNOG free text desc.actin binding
EggNOG OGsCOG5199@1,KOG2046@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalponin homology domain
Ec32 orthologEc-01_004810.1
Exons5
Model size2724
Cds size1137
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.1797206-UTR-P-fluviatile_contig14:1834813..18350351622815620.1797206-UTR-P-fluviatile_contig14:1834813..1835035Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1834814..1835035 -
1693562474.8146653-UTR-P-fluviatile_contig14:1834813..18350351693562474.8146653-UTR-P-fluviatile_contig14:1834813..1835035Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1834814..1835035 -
1622815620.2572372-UTR-P-fluviatile_contig14:1837640..18380091622815620.2572372-UTR-P-fluviatile_contig14:1837640..1838009Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1837641..1838009 -
1693562474.8736787-UTR-P-fluviatile_contig14:1837640..18380091693562474.8736787-UTR-P-fluviatile_contig14:1837640..1838009Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1837641..1838009 -
1622815620.2698543-UTR-P-fluviatile_contig14:1838079..18390751622815620.2698543-UTR-P-fluviatile_contig14:1838079..1839075Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1838080..1839075 -
1693562474.8812313-UTR-P-fluviatile_contig14:1838079..18390751693562474.8812313-UTR-P-fluviatile_contig14:1838079..1839075Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1838080..1839075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.1956844-CDS-P-fluviatile_contig14:1835035..18353081622815620.1956844-CDS-P-fluviatile_contig14:1835035..1835308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1835036..1835308 -
1693562474.8271775-CDS-P-fluviatile_contig14:1835035..18353081693562474.8271775-CDS-P-fluviatile_contig14:1835035..1835308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1835036..1835308 -
1622815620.2118814-CDS-P-fluviatile_contig14:1835984..18361011622815620.2118814-CDS-P-fluviatile_contig14:1835984..1836101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1835985..1836101 -
1693562474.8377697-CDS-P-fluviatile_contig14:1835984..18361011693562474.8377697-CDS-P-fluviatile_contig14:1835984..1836101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1835985..1836101 -
1622815620.2255795-CDS-P-fluviatile_contig14:1836607..18367271622815620.2255795-CDS-P-fluviatile_contig14:1836607..1836727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1836608..1836727 -
1693562474.8540297-CDS-P-fluviatile_contig14:1836607..18367271693562474.8540297-CDS-P-fluviatile_contig14:1836607..1836727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1836608..1836727 -
1622815620.2426322-CDS-P-fluviatile_contig14:1837013..18376401622815620.2426322-CDS-P-fluviatile_contig14:1837013..1837640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1837014..1837640 -
1693562474.8660254-CDS-P-fluviatile_contig14:1837013..18376401693562474.8660254-CDS-P-fluviatile_contig14:1837013..1837640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1837014..1837640 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2214.1prot_P-fluviatile_contig14.2214.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 1835036..1837640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2214.1

>prot_P-fluviatile_contig14.2214.1 ID=prot_P-fluviatile_contig14.2214.1|Name=mRNA_P-fluviatile_contig14.2214.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=379bp
MSASVAAVAAIPAVEYGAATTRPQSPPYRPPASSGGSQQQAQRGRYQSPA
HGGVASALASTLPAGDGRHQARPRSPVRMSNKVSPSAAAPSFTVTTPRQS
QPVPPSPATAAMSVSSPSVTSTAAHQQTPSAGRGGGYGLDAELAARREAN
YDYDAEAEAREWIEDVTGSAFIGGFGEELRDGRRLCELINRIKPGIVRKV
NESKMPFKQMENISNFLKACRSVGVAEHSLFETVDLYEDKDLGLVVRCLH
ALGQTVQNSCPDYIGPRLGVRQTEANKREWTAEQQRQQMLNSSGVISQLM
AGSSKTMERGAIIKSGVTFGAAQAGTGDRSATSGWTMGSAGTMDRAHIEK
RGPTYGAEYAGASGDTSGMSSRFTGGRR*
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mRNA from alignment at P-fluviatile_contig14:1834814..1839075-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2214.1 ID=mRNA_P-fluviatile_contig14.2214.1|Name=mRNA_P-fluviatile_contig14.2214.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4262bp|location=Sequence derived from alignment at P-fluviatile_contig14:1834814..1839075- (Porterinema fluviatile SAG_2381)
AACACTTACGGTACGTCTCTATCTTGTGGATCAAAGAGACATGCCCCGTT
CGGAGATCGTCGCCCAAAAAAGATTTCCTGCAAATTTTTCCTTCAAGATG
CACGTCACACCATTGCCTTTGTGTGCCCGCATATTTTCTGCGGTACGTTT
CCGACTTCAATTCAAGCATATGCTCACGACATTGTTCTCTCGGCAGCACG
TCGTTTGGCTTCGCTTACTTTCAGATACGGAGTGCGAAAATTACCAGCCG
AAAATCACTCGCCGAGGAGCGAGCTTTCGACCACCGAAATCCGCAAGAAG
GGTGACGAGGCTTCGAAAGGAGACCAACCGAGCGACTGCTGGCTTTCGTA
TCGACAACGAGCAACGAGCCAGCGAACGCCTCCGTCGCCATCCAGCTCAC
CCTACATCTGTCTCTCTCTGTCTCTCTTTGTCTCTCTCTGCCTCTTTACG
CCGCTGCGAGATTTTTGGCTTATGCTGCACCGGCCACGTTCATGTTTTGG
TGCTGGCGCACGAACTGAGAGGGGGCTCCTTCAACGCCAACCGCCGCCGA
CCCCACACACTGCCCTGCTGTGTGCCACCCCCCGCGTTCGTATCGTCACC
CCAATCGTAGCACGCCCTGGGTGGAACTGCCCAGCTGGAGTGCCCCGATT
TCTGTGGCCCGCACCTAGGCCTGAAGCCCCAGTCCAGAGTCTCCCCGCAC
AAGAAACCCCCGGGGGCCGCGGCGGCGGCGAAAACCTGGTCTACGTCTTC
CCCCTCTGCGGGGGCCGCCAAGACCTGGTCAACCACACCGTCCCCGGGAA
CACAACCGCCAGCCGCCGTGGCTTTTTCTCCTTCACCGCCTGCTCAGAGT
TGGTCCACGCCGTCGTCAGGGCGACCGGCGGCGGCAACGGCGCCCAAAGC
CTGGGCGACTTCTCCACGTAACAGCCTATCAGGGGCTACTTCCGCGGGCT
CGTCCGCCTCCTCCTCTCCACACTCCTCACCCGCAGCAGCGGAGCCGCCG
CCGCCGCCGCTGTTTTCTCACGTAGCGTCCGCCCCACCCAGCGCCGGCGG
CGGCGGCGGCGGTGAGTCAGAGGCGGCGCCCCCGCCGCCGTACGACGACA
CCGCTCAACGATGGGGTTCGGGACAGATCCGCCCAACGGCGACCGCCGGA
GCAGCCGCAACGGCAGCGGGACCACCGTCCGCTAGCAGGGGCGGAGGGCG
GCGCTTGCCGCCGCCCGCGTACCGGGAAGACCTTTCCTCAAGGTTCGCCG
AGTCGACGCGTATCGCCGACAGCAGCGGCAGCGGCGCCAGCGTAAGCCAA
GGAACTGTCGGTGTTGGCAGAGGCACTCCTCAGGCACCACGACCCCCGTC
CCCTCCGTACAGACCCCCGACGTCCTCCGGGTTCTCGCGGCAGCAGGAAC
GGAGTCTCTCAAGATCACCGGTCTACGGTGGAGGCATGTCTGCATCGGTA
GCGGCGGTGGCGGCGATACCTGCGGTGGAGTACGGGGCGGCGACCACCCG
ACCCCAGTCCCCTCCGTACAGGCCCCCGGCGTCCTCCGGGGGTTCGCAAC
AGCAAGCGCAGCGAGGTCGCTACCAGTCTCCCGCTCACGGGGGCGTTGCG
TCTGCATTGGCGTCGACTCTGCCTGCCGGCGACGGCCGTCACCAGGCTCG
CCCGAGATCTCCGGTCCGAATGAGCAACAAAGTCTCGCCCTCGGCGGCAG
CACCCTCTTTCACGGTCACAACACCTCGCCAGTCCCAGCCGGTGCCGCCT
TCACCGGCGACGGCGGCAATGTCGGTGTCTTCACCGTCGGTGACTTCCAC
CGCCGCTCATCAGCAGACGCCAAGTGCCGGTCGAGGCGGGGGCTACGGGC
TGGACGCCGAGCTGGCGGCGAGGCGGGAGGCCAACTATGACTATGACGCG
GAGGCAGAGGCGCGGGAGTGGATCGAGGACGTGACGGGGTCGGCCTTCAT
TGGTGGGTTCGGAGAGGAGCTGAGAGACGGCAGGAGGCTCTGCGAACTCA
TCAACAGGATCAAGCCCGGGATAGTGCGCAAAGTGAACGAGTCCAAGATG
CCTTTCAAACAGGTGTATGCGTGCCAAGTCTTCGTTATGTAGAGCAAGCG
AAACTTTGTCGCCGGAAGGGACTCCCGGCCTTGGGTGGCATCTCTCTGAC
CCTCGTGTCGCCAGAGGTTGAGGGCGGCGTAGAGGCCCTGGATGAACTAC
TCATGAGCTGCTTGGCCATGACTTGCGCAGTGAAGAACGATGCCATCGCC
AACGTATTTCAAGCACCAATGTGCCGTTCCCCGCTTGTTTCGTTGTCTGA
CTCTGCTGCTTCCGCGGCCTCTGCTCGCCCTTGCGCTGCTGCATCCAGAT
GGAAAACATTTCCAACTTCTTGAAGGCCTGTAGATCGGTGGGCGTGGCTG
AGCACTCGCTGTTCGAGACCGTCGATCTTTACGAAGACAAGGACCTCGGA
CTCGTGGTTCGTTGCCTGGTGAGACAGAGGGCTCATCGGCCAGTAGAAAC
GTAGCTCAGCGCTGTGGTTGTAGGTTGCGGTGCTTGAGAGTGTGGGGTGC
CAAATTCTTCGATGCATACGTGCTTTGACTCCAGGCCGGTAGACTACACC
AAAAACGCAGAAAACCCGGTTGCTTCCTGTCCATCATCACTGTTGGTACC
GTGAGCAAGTACGTTGGTCCTGTCGTGGACGGCCTGTCTGCTCAACTTTG
ATGCTGGTGGGGTCTTCAGTCATAAGATTGTTGCCCTTCGTGTCCCGTTC
TCGGCGGCTAGATATCGACCTGCTTGCACGCGGAGACGAGGGATGTGCTA
GATCATGTATTGATCTAGAGTTACCAACAGCCTACCGAAAGACACGGTCT
GCCTCGCCATCGTTCGCACGCCTTGGATTTTTGTCCGATGAGCTTCGCCT
AGAAAAGCATCAACCTCAGAACATTTTCTCGTCTTACGCCTCTTTCACCG
CTTTTTCATCCGTCGCCGTGACAGCACGCGCTGGGGCAGACGGTCCAGAA
CAGTTGTCCCGACTACATCGGGCCTCGTCTCGGAGTTAGGCAGACGGAGG
CGAACAAGCGGGAGTGGACCGCCGAGCAGCAGAGGCAGCAGGTACATGAC
GACGCGTCGGGAACTTGCCGGAGCGTATCGGAGCCTTCTCCCCACTTTCC
AAAAGCCGTAGAAGTCGTGCGCGGTTCACCCCTGACGATGTTCGTTACGT
GATGGAAGCTGTCGGTCATTCTCTTCGTTCCTCTCCCCCCGAACATTCTT
GCTATGTTTTGACTGCCCAAAATTTCCTTGTTTCATTCCGTGCAAAAGTG
AGCATGCGAAGCAGCTTAAAGTGGTGACGGACAAGTGTTTGTGATAAGAG
TCTCGGCGGAGTGCGCGCAGCGGGAGGTAATTGCCTCCTGAATATTTGGC
TGTTGCTACGAGTTTTTAGCGCGCATCCTCGTGAGTCCATCTCAAGCGAC
TGTTTTTGGATGTTTTCTTGTCTTTGTTGCTCTGCGGTAACTCCACAAAC
TTGAGTATCACAATTGCGCGAACACGCGTGCGGGGGCCATTGATCGTCCA
AGTTGACTCTCCTTGCCCGCAGTTACCGTGCTATCCTCCTCTTGTGACTA
GCGAGTACGACCCCGGGTGTGTCCTCGATAAAAAGCCCATCCCAATCCAC
AGGCAACCTCGAGCCAGGCGCTTCCCGCCAACATCGTCCGTTGCACTGGT
GACGACAAACAGCATGAAACTAATTGCCAACCGCACGCGCGATCAACCAA
CGGACTGATCGCGACAGATGCTCAACAGCTCGGGGGTGATATCGCAGCTC
ATGGCGGGATCGAGCAAGACAATGGAACGCGGAGCAATAATCAAATCGGG
GGTTACCTTCGGAGCGGCCCAGGCCGGAACCGGGGACAGGTCAGCCACCA
GCGGCTGGACGATGGGCTCTGCGGGCACGATGGACCGCGCACACATTGAA
AAGAGGGGCCCGACGTATGGGGCAGAGTACGCCGGAGCTTCCGGAGATAC
CTCGGGCATGTCGTCGCGCTTCACCGGCGGGCGACGATAGTAGTTGCTGG
AGTGTCCTTGTTTGCTCCGCTCGTGCCTGTCCCTTGTGATGGCAAAAGTT
CACCATCGCGATCCCAAAAGACTTCATCATCTCGCACGGCTGGTGTGATG
GGTGGTTGGTGATGATTTGAGTATTCGGGATGGTAGGCGGGTCTAGGGGA
GGTGGGGCCAGAAAACGTAGAGGTCGGGCAAAGAGGTCGGCCAGGCGGGT
TCAGGTGGTGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:1834814..1839075-

>mRNA_P-fluviatile_contig14.2214.1 ID=mRNA_P-fluviatile_contig14.2214.1|Name=mRNA_P-fluviatile_contig14.2214.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2274bp|location=Sequence derived from alignment at P-fluviatile_contig14:1834814..1839075- (Porterinema fluviatile SAG_2381)
ATGTCTGCATCGGTAGCGGCGGTGGCGGCGATACCTGCGGTGGAGTACGG
GGCGGCGACCACCCGACCCCAGTCCCCTCCGTACAGGCCCCCGGCGTCCT
CCGGGGGTTCGCAACAGCAAGCGCAGCGAGGTCGCTACCAGTCTCCCGCT
CACGGGGGCGTTGCGTCTGCATTGGCGTCGACTCTGCCTGCCGGCGACGG
CCGTCACCAGGCTCGCCCGAGATCTCCGGTCCGAATGAGCAACAAAGTCT
CGCCCTCGGCGGCAGCACCCTCTTTCACGGTCACAACACCTCGCCAGTCC
CAGCCGGTGCCGCCTTCACCGGCGACGGCGGCAATGTCGGTGTCTTCACC
GTCGGTGACTTCCACCGCCGCTCATCAGCAGACGCCAAGTGCCGGTCGAG
GCGGGGGCTACGGGCTGGACGCCGAGCTGGCGGCGAGGCGGGAGGCCAAC
TATGACTATGACGCGGAGGCAGAGGCGCGGGAGTGGATCGAGGACGTGAC
GGGGTCGGCCTTCATTGGTGGGTTCGGAGAGGAGCTGAGAGACGGCAGGA
GGCTCTGCGAACTCATCAACAGGATCAAGCCCGGGATAGTGCGCAAAGTG
AACGAGTCCAAGATGCCTTTCAAACAGATGTCTGCATCGGTAGCGGCGGT
GGCGGCGATACCTGCGGTGGAGTACGGGGCGGCGACCACCCGACCCCAGT
CCCCTCCGTACAGGCCCCCGGCGTCCTCCGGGGGTTCGCAACAGCAAGCG
CAGCGAGGTCGCTACCAGTCTCCCGCTCACGGGGGCGTTGCGTCTGCATT
GGCGTCGACTCTGCCTGCCGGCGACGGCCGTCACCAGGCTCGCCCGAGAT
CTCCGGTCCGAATGAGCAACAAAGTCTCGCCCTCGGCGGCAGCACCCTCT
TTCACGGTCACAACACCTCGCCAGTCCCAGCCGGTGCCGCCTTCACCGGC
GACGGCGGCAATGTCGGTGTCTTCACCGTCGGTGACTTCCACCGCCGCTC
ATCAGCAGACGCCAAGTGCCGGTCGAGGCGGGGGCTACGGGCTGGACGCC
GAGCTGGCGGCGAGGCGGGAGGCCAACTATGACTATGACGCGGAGGCAGA
GGCGCGGGAGTGGATCGAGGACGTGACGGGGTCGGCCTTCATTGGTGGGT
TCGGAGAGGAGCTGAGAGACGGCAGGAGGCTCTGCGAACTCATCAACAGG
ATCAAGCCCGGGATAGTGCGCAAAGTGAACGAGTCCAAGATGCCTTTCAA
ACAGATGGAAAACATTTCCAACTTCTTGAAGGCCTGTAGATCGGTGGGCG
TGGCTGAGCACTCGCTGTTCGAGACCGTCGATCTTTACGAAGACAAGGAC
CTCGGACTCGTGGTTCGTTGCCTGATGGAAAACATTTCCAACTTCTTGAA
GGCCTGTAGATCGGTGGGCGTGGCTGAGCACTCGCTGTTCGAGACCGTCG
ATCTTTACGAAGACAAGGACCTCGGACTCGTGGTTCGTTGCCTGCACGCG
CTGGGGCAGACGGTCCAGAACAGTTGTCCCGACTACATCGGGCCTCGTCT
CGGAGTTAGGCAGACGGAGGCGAACAAGCGGGAGTGGACCGCCGAGCAGC
AGAGGCAGCAGCACGCGCTGGGGCAGACGGTCCAGAACAGTTGTCCCGAC
TACATCGGGCCTCGTCTCGGAGTTAGGCAGACGGAGGCGAACAAGCGGGA
GTGGACCGCCGAGCAGCAGAGGCAGCAGATGCTCAACAGCTCGGGGGTGA
TATCGCAGCTCATGGCGGGATCGAGCAAGACAATGGAACGCGGAGCAATA
ATCAAATCGGGGGTTACCTTCGGAGCGGCCCAGGCCGGAACCGGGGACAG
GTCAGCCACCAGCGGCTGGACGATGGGCTCTGCGGGCACGATGGACCGCG
CACACATTGAAAAGAGGGGCCCGACGTATGGGGCAGAGTACGCCGGAGCT
TCCGGAGATACCTCGGGCATGTCGTCGCGCTTCACCGGCGGGCGACGATA
GATGCTCAACAGCTCGGGGGTGATATCGCAGCTCATGGCGGGATCGAGCA
AGACAATGGAACGCGGAGCAATAATCAAATCGGGGGTTACCTTCGGAGCG
GCCCAGGCCGGAACCGGGGACAGGTCAGCCACCAGCGGCTGGACGATGGG
CTCTGCGGGCACGATGGACCGCGCACACATTGAAAAGAGGGGCCCGACGT
ATGGGGCAGAGTACGCCGGAGCTTCCGGAGATACCTCGGGCATGTCGTCG
CGCTTCACCGGCGGGCGACGATAG
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