prot_P-fluviatile_contig1.126.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.126.1
Unique Nameprot_P-fluviatile_contig1.126.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length330
Homology
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BLAST of mRNA_P-fluviatile_contig1.126.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 1.130e-159
Identity = 231/320 (72.19%), Postives = 270/320 (84.38%), Query Frame = 0 
Query:    8 GTASQRHRQRAGPKVVMVMGMPGAGKSNLANKLLNHPSWDAFEEGDGIYGATVEAQRAEWDDMVVIDTPAIPSHDPQTTIENFDSVVQMLRDESSLSTLIFLVQQEEVIPAEFRDYAILLKQLNQLPCSKLIVCRQQMALSKRHKRTEDDRRHAGAMFVEQVLEDSGLNMPLVLLNDGYGSESFKQTEEIRRFVQRSERAPVDL-ASLRTFAELRLFWQRLADPACRLVALEEEIQELELALWHRSLWMACQVVPLAYISVTSPGAACLWTGCYVKREQEAFSELRRELKDKREEVEYKTVDEEELCAAKGIFAYLNHMC 326
            G  S   R++  PKVVMV+GMP AGKSNLANKLLNHP+WDAFEEGDG YG+T E QR EW D+VVIDTP  P HDP+TT +NFD++V+ LR E SLSTLIFLVQQEEV P EFRDYA+LL+QLN LPCSKLIVCRQ  ALS+RHKRTE++RRH+GA FVE VL+DSGLNMPLVLLNDGYGSES KQ +EIRRFV RSERA +DL ASLRTFAELR F  +LADPA RL  + EE++++E +LWHRSLWMACQVVPLAYISV+SPGA C+WTG YVKREQEA + LR+EL DK+EE+E   VDE+EL AA+G+ A+L++MC
Sbjct:   21 GAGSNGRRRQEAPKVVMVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQ-AALSRRHKRTEEERRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLDYMC 339
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BLAST of mRNA_P-fluviatile_contig1.126.1 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.400e-78
Identity = 124/170 (72.94%), Postives = 145/170 (85.29%), Query Frame = 0 
Query:  158 RRHAGAMFVEQVLEDSGLNMPLVLLNDGYGSESFKQTEEIRRFVQRSERAPVD-LASLRTFAELRLFWQRLADPACRLVALEEEIQELELALWHRSLWMACQVVPLAYISVTSPGAACLWTGCYVKREQEAFSELRRELKDKREEVEYKTVDEEELCAAKGIFAYLNHMC 326
            +RHAGA FVE VLEDSGLNMPLVLLNDGYGSESFKQ +EIRRFV RSERA +D LAS RTFAELR F  +LADPA RL  L EE++++E +LWHRSLWMAC VVPLAYISV+SPGA C+WTG YVKREQEA + LR+EL DK+EE+E   VDE+ELCAA+G+ A+L++MC
Sbjct:   26 KRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLDYMC 195
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE1.130e-15972.19G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LN49_ECTSI3.400e-7872.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 281..301
NoneNo IPR availableGENE3D3.40.50.300coord: 7..171
e-value: 5.0E-10
score: 41.0
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 23..115
e-value: 5.5E-7
score: 29.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1667770..1670093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.126.1mRNA_P-fluviatile_contig1.126.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 1667770..1671349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.126.1 ID=prot_P-fluviatile_contig1.126.1|Name=mRNA_P-fluviatile_contig1.126.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=330bp
MKRVKGTGTASQRHRQRAGPKVVMVMGMPGAGKSNLANKLLNHPSWDAFE
EGDGIYGATVEAQRAEWDDMVVIDTPAIPSHDPQTTIENFDSVVQMLRDE
SSLSTLIFLVQQEEVIPAEFRDYAILLKQLNQLPCSKLIVCRQQMALSKR
HKRTEDDRRHAGAMFVEQVLEDSGLNMPLVLLNDGYGSESFKQTEEIRRF
VQRSERAPVDLASLRTFAELRLFWQRLADPACRLVALEEEIQELELALWH
RSLWMACQVVPLAYISVTSPGAACLWTGCYVKREQEAFSELRRELKDKRE
EVEYKTVDEEELCAAKGIFAYLNHMCLEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase