mRNA_P-fluviatile_contig14.2204.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2204.1
Unique NamemRNA_P-fluviatile_contig14.2204.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: D7FNL5_ECTSI (Short-chain alcohol dehydrogenase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL5_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 1.270e-121
Identity = 184/229 (80.35%), Postives = 208/229 (90.83%), Query Frame = 1 
Query: 1675 QTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQARSSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            +TVVVTGADGGIG  FC+HYA KG  VFACRRK+TP ASSLFD NPNIHVVDGVD+T D GAGCLV+ALEKAG+PKVD+LINNAG M + R++LD+ VLRESME+NAYGALRIT  LLG++++AAPG KI+LITSKMGSMADN+SGGAYGYRMSKAALNAAG SL+HDLKG G+ VAILHPGWVRT+MTG+SGLVD  ESVAGMT+RIEEL+LSNSGTFWGFKGDVIPW
Sbjct:   10 RTVVVTGADGGIGSSFCKHYASKGDQVFACRRKATPDASSLFDNNPNIHVVDGVDVTMDEGAGCLVSALEKAGSPKVDVLINNAGVMKRDRNTLDIGVLRESMEVNAYGALRITNTLLGKRMLAAPGAKIILITSKMGSMADNSSGGAYGYRMSKAALNAAGVSLAHDLKGDGMAVAILHPGWVRTRMTGDSGLVDTHESVAGMTDRIEELDLSNSGTFWGFKGDVIPW 238
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: A0A2E9QWS4_9DELT (Short-chain dehydrogenase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9QWS4_9DELT)

HSP 1 Score: 217 bits (553), Expect = 3.140e-61
Identity = 118/231 (51.08%), Postives = 152/231 (65.80%), Query Frame = 1 
Query: 1672 MQTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMT-QARSSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            M TVVVTGA+ GIG EFCR    +G  V A  R S+ A  +L      + VV GVD++  A       +L   G+ K+DILINNAG +  +    +D D + +  E+N+ G LR+T  LL      + G K+ L+TS+MGS+ADNTSG  YGYRMSKAALN AG SL+HDLK + I VAILHPG+VRT MTG  G++DA +S AG+ +RI+ELNL NSGTFW   G+V+PW
Sbjct:    1 MGTVVVTGANRGIGLEFCRQLKERGEQVIALCRSSSEALDAL-----GVRVVTGVDVSDQASLDTFAASL---GDEKIDILINNAGILKRETLEEMDYDTIFKQFEVNSVGPLRVTHTLLPH---LSEGAKVALVTSRMGSIADNTSGSRYGYRMSKAALNMAGVSLAHDLKDRSISVAILHPGFVRTDMTGRQGMIDADQSAAGLIQRIDELNLDNSGTFWHTNGEVLPW 220
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: A0A7Z9G4R6_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Z9G4R6_9DELT)

HSP 1 Score: 217 bits (552), Expect = 4.330e-61
Identity = 118/231 (51.08%), Postives = 154/231 (66.67%), Query Frame = 1 
Query: 1672 MQTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMT-QARSSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            M TV+VTGA+ GIG E CR  +  G  + A  RKS+P   SL      +  V GVD+++D     L   L   G+ ++D+LINNAG +  ++   LD+D + E  ++N+ G LR+T  L  R    + G K+ +I+S+MGS+ADN+SG  YGYRMSKAA+N AG SL+ DLK QGI VAILHPGWVRT MTGN+GLVDA ES AG+  RIEEL L NSGTFW   G+++PW
Sbjct:    1 MSTVLVTGANRGIGLELCRQLSTGGHQIIAACRKSSPDLDSL-----KLRTVCGVDVSSDEAVQMLDAEL---GDTQLDLLINNAGILRRESLEELDMDSMLEQFKVNSLGPLRVTATLRHRM---SAGAKVAIISSRMGSIADNSSGSRYGYRMSKAAVNIAGVSLARDLKPQGIAVAILHPGWVRTDMTGNTGLVDAKESAAGLIARIEELTLENSGTFWHMNGEILPW 220
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: UPI001688FB54 (SDR family oxidoreductase n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001688FB54)

HSP 1 Score: 212 bits (540), Expect = 2.070e-59
Identity = 121/233 (51.93%), Postives = 152/233 (65.24%), Query Frame = 1 
Query: 1672 MQTVVVTGADGGIGQEFCRHYARKGASVFA-CRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQAR-SSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTG-NSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            M T +VTGA+ GIG EFCR    +G +V A CR  S P  +        + V  GVDIT DA    L + L   GN  +D+LINNAG + +     LD D +R+  E+NA GALR+T  LL R      G K+VLITS+MGS+ADNTSGG+YGYRMSK AL+ AGKSL+HDLK +GI VA+LHPG V+T+MT   SG + A  SV G+  RI++L L NSGTFW   G+V+PW
Sbjct:    1 MATYLVTGANRGIGYEFCRQLQARGETVIAVCRTDSEPLQAL------GVQVETGVDITDDASVASLSDRL---GNQSIDVLINNAGILQRVTLEDLDFDSIRQQFEVNALGALRVTHTLLPR---LKAGSKVVLITSRMGSIADNTSGGSYGYRMSKVALSMAGKSLAHDLKSRGIAVAVLHPGLVQTRMTNFTSGGISAETSVKGLLARIDQLTLDNSGTFWHSNGEVLPW 221
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: R8AYG3_9GAMM (Short chain dehydrogenase/reductase family oxidoreductase n=2 Tax=Marinobacter TaxID=2742 RepID=R8AYG3_9GAMM)

HSP 1 Score: 212 bits (540), Expect = 2.210e-59
Identity = 120/235 (51.06%), Postives = 153/235 (65.11%), Query Frame = 1 
Query: 1663 VPLMQTVVVTGADGGIGQEFCRHYARKGASVFA-CRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQAR-SSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            +P  QTVV+TGA+ GIG E  RHYA KG  V   CR  S     +         V++GVD+T+DAG   LV  L+      +D+LINNAG +   +  S+D D +R  MEINAY  LR+  AL+G+      GGKI  ITS+MGS+ADN SGG YGYR SKAALNA GKSL+ DL+ +GI VA LHPG+V+T+M    GL+  +ES  G+ ERIEELNL NSG+FW   G+++PW
Sbjct:    1 MPENQTVVITGANRGIGLELARHYAGKGCQVIGVCREASAELQETAAK------VIEGVDVTSDAGIQKLVKELD---GQTIDLLINNAGLLQDEKLGSIDFDSIRTQMEINAYAPLRVAEALVGQ---IPYGGKIANITSRMGSIADNDSGGRYGYRASKAALNAFGKSLAVDLQPKGIAVAQLHPGYVKTRMVNFGGLITPAESAKGLAERIEELNLDNSGSFWHSNGELLPW 223
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: A0A7S2V6A8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6A8_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.100e-59
Identity = 125/257 (48.64%), Postives = 168/257 (65.37%), Query Frame = 1 
Query: 1624 LLIGLPTVSSFSSVPLMQT------VVVTGADGGIGQEFCRHYARKGASVFA-CRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQARSSLDLDVLRESM---EINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIE-ELNLSNSGTFWGFKGDVIPW 2361
            +LI   T  +F + P+  +      VV TGA+GGIG+ FC HY+++G+ V A CR        +L    PN  +++G+D+T DA    L + LE++ + KVDILINNAG   +   SLD  V  +++   E+NA G LR+T  L  R+L+ +PG K+ LITS+MGSM DNTSGG Y YRMSKAALNAAG SL+ DLK  G+ VAILHPGWVRT MT   GL+   ESV+GM + +E EL+L+ SGT+W   G+V+ W
Sbjct:   10 ILIKAFTSLAFHAAPMKMSSKTPSVVVATGANGGIGKSFCEHYSQQGSKVIAVCRSGEDIKKMNL----PNTEIIEGIDVTCDASVKKLADFLEQS-DLKVDILINNAGSAARG-DSLDEIVYNDAVKAFEVNAVGPLRVTKQLYDRRLLTSPGCKVGLITSRMGSMKDNTSGGRYAYRMSKAALNAAGVSLAFDLKPLGVSVAILHPGWVRTAMTNFDGLISPKESVSGMVKILEDELDLNTSGTWWHTNGEVLQW 260
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: A0A168S9S7_9CYAN (Short-chain dehydrogenase n=5 Tax=Oscillatoriales TaxID=1150 RepID=A0A168S9S7_9CYAN)

HSP 1 Score: 209 bits (531), Expect = 3.430e-58
Identity = 117/231 (50.65%), Postives = 154/231 (66.67%), Query Frame = 1 
Query: 1672 MQTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQAR-SSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            M T ++TGA+GGIG+E+CR   ++G  V A  R S+P    L      + V  GVDIT+DA    LV+ LE  G P +D+LINNAG +       LD D +R   E+NA G LR+T ALL      + G K++L+TS+MGS+ DNTSGG+YGYRMSK A++ AGKSLSHDLK +GI VAILHPG V T MT ++G+  A ESV G+ +RI++L L  +GTFW   G+V+PW
Sbjct:    1 MATYLITGANGGIGREYCRQLKQRGDEVIAVCRSSSPELDQL-----GVRVETGVDITSDAAVADLVSRLE--GKP-LDVLINNAGILQSIPLEHLDFDGIRRQFEVNAIGTLRVTAALLPN---LSQGSKLILMTSRMGSIGDNTSGGSYGYRMSKVAMSMAGKSLSHDLKPRGIAVAILHPGLVSTPMTHHTGIPPA-ESVGGLLQRIDDLTLETTGTFWHANGEVLPW 219
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: A0A0P7Z6D2_9CYAN (Putative short-chain dehydrogenase n=1 Tax=Phormidium sp. OSCR TaxID=1666905 RepID=A0A0P7Z6D2_9CYAN)

HSP 1 Score: 208 bits (529), Expect = 6.490e-58
Identity = 116/231 (50.22%), Postives = 156/231 (67.53%), Query Frame = 1 
Query: 1672 MQTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQ-ARSSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            M T ++TGA+GGIG+E+CR   ++G  V A  R S+P    L      + V  GVDIT++A    LV+ L  AG P +D+LINNAG +   +  +LD D +R   E+NA G LR+T ALL      + G K++L+TS+MGS+ DNTSGG+YGYRMSK A++ AGKSLSHDLK +GI VAILHPG V T MT ++G+  A ESV G+ +RI++L L  +GTFW   G+V+PW
Sbjct:    1 MATYLITGANGGIGREYCRQLKQRGDEVIAVCRSSSPELDQL-----GVRVETGVDITSEAAVADLVSRL--AGKP-LDVLINNAGILQSISLDNLDFDGIRRQFEVNAIGTLRVTQALLPN---LSQGSKLILMTSRMGSIGDNTSGGSYGYRMSKVAMSMAGKSLSHDLKPRGIAVAILHPGLVSTPMTHHTGIPPA-ESVGGLLQRIDDLTLETTGTFWHANGEVLPW 219
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: UPI001C4BA2BF (SDR family oxidoreductase n=3 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001C4BA2BF)

HSP 1 Score: 207 bits (526), Expect = 1.910e-57
Identity = 117/230 (50.87%), Postives = 148/230 (64.35%), Query Frame = 1 
Query: 1675 QTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQAR-SSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            QTVV+TGA+ GIG E  RHYA     V    R+++   + +        V+DGVD+TTDAG   L +ALE  G P +D+LINNAG +   +  S+D D +R  ME+NAY  LR+  AL+        GGKI  ITS+MGS+ADN SGG YGYR SKAALNA GKSL+ DLK +GI VA LHPG+V+T+M    GL+   ES  G+  RIE LNL N+G+FW   GD +PW
Sbjct:    5 QTVVITGANRGIGLELARHYAALDCDVIGVCREASAELAEIAT-----RVIDGVDVTTDAGIQTLTSALE--GQP-IDLLINNAGLLQDEKLGSIDFDSIRMQMEVNAYAPLRVAEALVSHM---PSGGKIANITSRMGSIADNDSGGRYGYRASKAALNAFGKSLAMDLKQKGIAVAQLHPGYVQTRMVNFGGLITPEESAKGLAARIEGLNLENTGSFWHSNGDELPW 223
[Close]
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Match: UPI001CBE57C5 (SDR family oxidoreductase n=1 Tax=Marinobacter sp. F4216 TaxID=2874281 RepID=UPI001CBE57C5)

HSP 1 Score: 207 bits (526), Expect = 1.910e-57
Identity = 116/230 (50.43%), Postives = 151/230 (65.65%), Query Frame = 1 
Query: 1675 QTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAASSLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQAR-SSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGSMADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMTGNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW 2361
            +TVV+TGA+ GIG E  R YA +G  V    R S+   S + +      V+DGVD+TTDAG   L +AL   G+ ++D+LINNAG +   +  S+D D +R  MEINAY  LR+  AL+ R      GGKI  ITS+MGS+ADN SGG YGYR SKAALNA GKSL+ DL+ +GI VA LHPG+V+T+M    GL+  +ES  G+ ERI +LN  NSG+FW   G+ +PW
Sbjct:    5 KTVVITGANRGIGLELARRYAGEGCRVIGVCRSSSDELSEVAE-----QVIDGVDVTTDAGIEKLTSAL---GDEQIDLLINNAGLLQDDQLGSIDFDSIRTQMEINAYAPLRVVEALVSR---IPSGGKIANITSRMGSIADNDSGGRYGYRASKAALNAFGKSLAVDLQPKGIAVAQLHPGYVKTRMVNFGGLITPAESALGLVERINQLNPENSGSFWHSNGEELPW 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNL5_ECTSI1.270e-12180.35Short-chain alcohol dehydrogenase-like protein n=2... [more]
A0A2E9QWS4_9DELT3.140e-6151.08Short-chain dehydrogenase n=2 Tax=Deltaproteobacte... [more]
A0A7Z9G4R6_9DELT4.330e-6151.08SDR family oxidoreductase n=1 Tax=Myxococcales bac... [more]
UPI001688FB542.070e-5951.93SDR family oxidoreductase n=1 Tax=Microcoleus sp. ... [more]
R8AYG3_9GAMM2.210e-5951.06Short chain dehydrogenase/reductase family oxidore... [more]
A0A7S2V6A8_9STRA7.100e-5948.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A168S9S7_9CYAN3.430e-5850.65Short-chain dehydrogenase n=5 Tax=Oscillatoriales ... [more]
A0A0P7Z6D2_9CYAN6.490e-5850.22Putative short-chain dehydrogenase n=1 Tax=Phormid... [more]
UPI001C4BA2BF1.910e-5750.87SDR family oxidoreductase n=3 Tax=unclassified Mar... [more]
UPI001CBE57C51.910e-5750.43SDR family oxidoreductase n=1 Tax=Marinobacter sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1777479..1782186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue1.5e-102
Seed eggNOG ortholog2880.D7FNL5
EggNOG free text desc.cellular detoxification of aldehyde
EggNOG OGsCOG1028@1,KOG1611@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionshort-chain alcohol dehydrogenase-like protein
Ec32 orthologEc-01_005030.1
Exons5
Model size2920
Cds size873
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.0586996-UTR-P-fluviatile_contig14:1777478..17780341622815619.0586996-UTR-P-fluviatile_contig14:1777478..1778034Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1777479..1778034 -
1693562472.084565-UTR-P-fluviatile_contig14:1777478..17780341693562472.084565-UTR-P-fluviatile_contig14:1777478..1778034Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1777479..1778034 -
1622815619.1434221-UTR-P-fluviatile_contig14:1780695..17821861622815619.1434221-UTR-P-fluviatile_contig14:1780695..1782186Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1780696..1782186 -
1693562472.1474063-UTR-P-fluviatile_contig14:1780695..17821861693562472.1474063-UTR-P-fluviatile_contig14:1780695..1782186Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1780696..1782186 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.07107-CDS-P-fluviatile_contig14:1778034..17781801622815619.07107-CDS-P-fluviatile_contig14:1778034..1778180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778035..1778180 -
1693562472.0991766-CDS-P-fluviatile_contig14:1778034..17781801693562472.0991766-CDS-P-fluviatile_contig14:1778034..1778180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778035..1778180 -
1622815619.0852416-CDS-P-fluviatile_contig14:1778360..17784551622815619.0852416-CDS-P-fluviatile_contig14:1778360..1778455Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778361..1778455 -
1693562472.1116655-CDS-P-fluviatile_contig14:1778360..17784551693562472.1116655-CDS-P-fluviatile_contig14:1778360..1778455Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778361..1778455 -
1622815619.0981476-CDS-P-fluviatile_contig14:1778682..17787811622815619.0981476-CDS-P-fluviatile_contig14:1778682..1778781Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778683..1778781 -
1693562472.122422-CDS-P-fluviatile_contig14:1778682..17787811693562472.122422-CDS-P-fluviatile_contig14:1778682..1778781Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1778683..1778781 -
1622815619.1137705-CDS-P-fluviatile_contig14:1779076..17793341622815619.1137705-CDS-P-fluviatile_contig14:1779076..1779334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1779077..1779334 -
1693562472.1302722-CDS-P-fluviatile_contig14:1779076..17793341693562472.1302722-CDS-P-fluviatile_contig14:1779076..1779334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1779077..1779334 -
1622815619.1277077-CDS-P-fluviatile_contig14:1780420..17806951622815619.1277077-CDS-P-fluviatile_contig14:1780420..1780695Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1780421..1780695 -
1693562472.1382515-CDS-P-fluviatile_contig14:1780420..17806951693562472.1382515-CDS-P-fluviatile_contig14:1780420..1780695Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1780421..1780695 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2204.1prot_P-fluviatile_contig14.2204.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 1778035..1780695 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2204.1

>prot_P-fluviatile_contig14.2204.1 ID=prot_P-fluviatile_contig14.2204.1|Name=mRNA_P-fluviatile_contig14.2204.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=291bp
MLSRLWLLRNPAASALFLTGDGVGTTGVAGMLCRRGSLATFACRLLIGLP
TVSSFSSVPLMQTVVVTGADGGIGQEFCRHYARKGASVFACRRKSTPAAS
SLFDGNPNIHVVDGVDITTDAGAGCLVNALEKAGNPKVDILINNAGFMTQ
ARSSLDLDVLRESMEINAYGALRITTALLGRKLVAAPGGKIVLITSKMGS
MADNTSGGAYGYRMSKAALNAAGKSLSHDLKGQGIGVAILHPGWVRTKMT
GNSGLVDASESVAGMTERIEELNLSNSGTFWGFKGDVIPW*
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mRNA from alignment at P-fluviatile_contig14:1777479..1782186-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2204.1 ID=mRNA_P-fluviatile_contig14.2204.1|Name=mRNA_P-fluviatile_contig14.2204.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4708bp|location=Sequence derived from alignment at P-fluviatile_contig14:1777479..1782186- (Porterinema fluviatile SAG_2381)
ACACAAGGAGGGCCGACGTGGGCACCTTACGTGCGTGAGGAACAAGGTTG
GCAAAAGCTGGTCGTTTTTGTTGAAGATCGCTTACAGTCTTGCCGTCTGT
TGCCCAAAAACGTGTGCTTCTCTCTTTTTGTCGTGATGCATGCTGGGCGC
GTGGATCCTCTTTTTAGACTACAAATTTGTTGCCCCATCTAAATATCGAG
CAGGAATTCGAAATTAGAGGATGATTCTGACGATTATTTCACTGAGAGCG
CTGCAACGTTTACGCGAGCGCACACCAGTATCCTATCGGCAGCACCGGCG
GCAGGTCAGTTACAGGAGTGAATACGTTCGTGGCAGAGGAGCGGACGAGT
GTTCTGCTGCGCATGAACGGGTCGACTGTAACTCAATCGCTCTCGTGCCT
CATGATACAACTCAAGTTTGCTAGGCTGAGTTTGTTCTTCAAATTTTGAC
AAACGCGTCAACAGCCGTCACACGTCATAAGTGATCGCCGGTGAGTGCAA
ACGGTGCTCTCTATGTACCACAAATTGCTGTCGACGATCCGCCGTTGTTT
AGGCTGTACACTCATTTCTTTGGAGACCTCGAGGTTGCTGAGCAGGCAGG
CAGTTGTGAAATAGACAACGTAGTTCTCGGTTGCGCCACGGATACTAAAT
ACCCCCCTCCCCACGCTCTCGAACGAGATGCGCCGGCCCGATGGCGTGTC
AAGGGGTTGGGTGGGCGCCGGGTTGGCGACGGCGCTGTAAAACATGCTGC
GTGAGACGGGCAACCAGGTTCTCGCCTGTTTTGCTCTGTTTTTGGGGGGG
CGGTTTCAATAATGGAGGTCGAGTAACACCATGAGTGCGGGTTGGCGATG
TCAACTCTGCAGCGTGGTATTACCACGCAGTGTTGGAATGGTGATGCACC
CGCGAGGCACGGCCGTAGTACATTCAAATGGCTGCCTTTCTGGGGGCGAT
ACGAAAGAACAGGTTGCAGCTCAGTTGACGCTGGCATCCATGTGCAAAAT
CAGGCCGACCATTCTTTGTAGGATGCTCCTCACCCTCATGCGGCTCGCCA
AATGCATCACGGCGCTTCGCGCTTGGTGAATGAAAGAGCCTGGGCCGGTG
ACAATCCGGAACATCGATCCGTCCTGGCCTAGAAGATATGCGAGGTCATT
GGCCTAACGGCTATGGCGTGCGTGCGTGAAATGAGTACACCCCCCTCCCC
CCTCCGTACCCCTCTTCTCTACATGAAACGCGTTGCAGACCTCGGTATCA
ACCAGCGGTAACGAGGGCCTATGCCAAGAAGTTTGGAAAACAAGATTTGT
ACGTCCGAGGACGTCAGTCGCATGCTCCATCGTCGTTATTCGAGTTCCAC
CAATTGTTTTTGCTCTTAGAAGCCCAGCTCATGGGGTGTAGTCTTGTGTG
GCATCGTCCCATTCATGAATCCAAATTGTTTGATCTCGCATGCAAATCGC
ACAGAAAGGACTTCGCACATATCAAACGATTGTTTTAATGTATGCTCTCC
CGTTTGTGGCTGCTGCGAAACCCCGCCGCCTCTGCCCTCTTTCTCACTGG
TGATGGAGTAGGCACAACAGGTGTAGCTGGCATGCTGTGCAGGAGAGGAT
CTTTGGCTACCTTTGCTTGCCGGCTCTTGATAGGACTGCCTACCGTGTCT
TCTTTCTCCTCTGTTCCACTCATGCAAACGGTTGTTGTTACCGGAGCCGA
TGGCGGCATCGGTCAAGAATTCTGCCGTCACTACGCAAGAAAGGGGGCGT
CTGTGTTCGCCTGCAGGTATGGGATTTTACTGTAGCATTGCATGGCCATT
TCTTGTGCTGTTTTCTTTGTTTCGAACCCTTGCGAGAACGATGCGGGTTA
CTTGTGAGAACCCCTTCCCATGGCATGTGCGTCCTTACTACCGTTGTCTC
CATTCTGAACCCACCACAGACCAATATTTACGAATGCGGTAACAGGGAGA
GATCACGAAGATAGTCAACTTCCCCGACGACAAAAAAAGCGGACCAATCA
AAACTGCTGTGAGGGCCAGGCCAGACCAGAAAGGAGGGGTGACGCGACAC
GGCAGAGAGGTCCTTTGTCGTGTGTGTGTGACCGAAGATGCAGAGGGGCC
AGGTGCTCCACGCTATCTCCTGCCGCGCCGAAGGCATTGAGACCATGCCA
AGAAACATGAAGGAAGAACACGTCGTTCCCTCGATCGACTACTTGAACAG
ATGAATGTATCTGAGAGAATAGTCAAAATCATCGGGAAGCGTTCTTTATT
GCAATATGGCAAGCCTACTTTGCCTCATCGGGTGCGCTTCAAGCTTGTGC
TTGCGTGGGCGGGACTGCAGGTGCGTTACGAGATCAGGCGAGCGAAAGCC
AGGGTGAAAAATGAGCACGCCAAATAATCCATCGTGTGATTGACCAACAG
CCGAAGAGTTGAAAGCCGGAATGAAATGTTTGGTTTGTTGTGCGCGGCTT
TCTACAGTCGCCACAGCTGCGAACATCCGCGAGCGGGCAGCGTGCAAGAC
GGCAATCGTGGGCTACTACCGTGGGCTACTACTGTGTTGTGGGAATGTCG
AAGCAAGAAGAGGTCGAGCGAGCGAAAGCAGTCGACGAAGAATCCTGACA
GCTCACAAGATATCTCGCGTTCAAAATGCTTATCCCACTGTACCCACAGG
ACTTAGCCCAGAAGATTATTAAGGCGGGTGCCTCTTGGATTATGATGGGT
AGCGAAGGGCGTAGGATGGGGATGACTGCGGACGGGAATCAAAATATAAA
GCGCTTCGAGACAATGACAGTGGCAGACACGCACCGGCCAGGCTAATACC
ACTGTACCCTCCCCCCTGCCCGTTTCTGGACATCGAACCCGGAACGAAAC
AGGCGAAAATCTACGCCTGCCGCGAGTTCTTTGTTCGATGGTAATCCGAA
CATCCACGTCGTGGACGGCGTCGATATTACCACCGACGCAGGGGCGGGGT
GTCTCGTCAACGCCCTCGAAAAGGCCGGCAATCCGAAGGTTGATATTTTG
ATCAACAACGCTGGTTTCATGACGCAAGCCCGGAGCTCATTGGACCTTGA
CGTTTTGCGCGAGTCTATGGAGATCAACGCCTACGGGGCTTTGAGAATTA
CCACGGCTCTGTGAGTTTGCAAGGGGCGACCTTCGACGACATTCTACTCG
CCCTTCATCTGTTGGATAATATGGAAAAGTAGGAAGGGAGCTCACGTTGG
CTGGGAATTTCGCGTGGAGACGAGAGTCGACCGCTGGGGGGGCTAAGTTT
GCAGCAGCTCCTCACATAGTTCGCCTGTGTCTCTTTTGGCCAGATAACTC
TCCCTGTGACGGAGCCCAACCGATCGCGAGCAAGACACTATTAATAACAG
CTATCGGTTGTGATTTTGCACAAAGTCGTAAATCCGCGCGCTGTTTTCTC
TGCAGGCTAGGCCGGAAACTGGTTGCCGCGCCCGGCGGAAAAATCGTTCT
CATCACGTCGAAGATGGGATCGATGGCGGACAACACATCGGGTGGCGCTT
ATGGGTAAGAAGAGGTTGTGGACGTTATCATTGCGGAAACTTGCGTCCAC
GATGCTATGCAGAAAGTACCCAGTGCAAAACTGCAGCAGTGGGTATTGTC
GAGGTGCAACTTCATGCGACGTGTTGGATCTGAAGTTCCCGCTCAGTGGA
CGCGCTGATTCCTATGGTTCTCGCTTTTTCTGAAACATCTCATGTAATTG
CATTCGTCTGATGCATGTCTTTCTCCGCAAGGTATCGGATGAGTAAAGCG
GCGCTTAATGCGGCGGGAAAATCCCTGTCGCACGATCTGAAGGGGCAAGG
CATCGGCGTCGCCATTCTTCACCCAGGTTTGTCGAGGGTCAACCAGCAGC
CCATTTCTTGAGACTCAAATTCGCGAAAGCCGCTGATACGTCAAGTGTGT
CCGCAAAGTGAACACATAAAGTGCACCAGCAGGCACAACATGAATCGTTT
CATTTGAACATGCTGCATGACGCCAAAATGCCTTGCATCGCATCGTGTGT
ACTCAGGGTGGGTTCGGACAAAAATGACGGGCAATTCCGGTTTGGTCGAC
GCGTCCGAATCAGTGGCCGGCATGACGGAAAGAATCGAGGAGCTGAACCT
GTCAAACTCGGGAACGTTTTGGGGTTTCAAGGGCGACGTGATCCCGTGGT
GAAGCACGCGGGCGGAGACCTCTAATGTTCTACTGTAAAGCGTAGCCCAT
GTCCGTAGGAAGGCTTTTGGGGCAGTTGCGTGGAAATCGAGGCGAGAAGC
ACCCAATACAGCCCTGCCACCAGGAGATTTCGATACATAGCACTCCACCG
CGGCGTCAGGCTTTGTGATTGACCGTTTTTCAAGAGTATCCGCGCTCTGT
CGGGCGGGTCTCCGGGGTTACTATGAGCGCTCATAAGAGCAGGTATCACC
AGTTGACTTCAAGCGGGTGGTGTTTACGCGACATCGAGCAGATGTCTAGG
GCTTCTTCGTTTGAAAACAGTACCTCGGCGTCTAATTTTGCTTCAACTCA
TATTTTGCAACGGCAAGGAAAGGGTAGAAGCTTCGAATTCCCACGGAAGC
CCTCGGCTCTCTTCACAAATTGCAATGCAAAACCTCCGACAGCCAGCAGG
GGGAATCCCAGCTGGCGCTATAGCGAATGTCGCGTCCTCATGCGACCCTT
CTACAGCTCCTCAAATTCTGGATAGTGGACCTTACGAAGTTGCCCACGGT
CTTCGAAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:1777479..1782186-

>mRNA_P-fluviatile_contig14.2204.1 ID=mRNA_P-fluviatile_contig14.2204.1|Name=mRNA_P-fluviatile_contig14.2204.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1746bp|location=Sequence derived from alignment at P-fluviatile_contig14:1777479..1782186- (Porterinema fluviatile SAG_2381)
ATGCTCTCCCGTTTGTGGCTGCTGCGAAACCCCGCCGCCTCTGCCCTCTT
TCTCACTGGTGATGGAGTAGGCACAACAGGTGTAGCTGGCATGCTGTGCA
GGAGAGGATCTTTGGCTACCTTTGCTTGCCGGCTCTTGATAGGACTGCCT
ACCGTGTCTTCTTTCTCCTCTGTTCCACTCATGCAAACGGTTGTTGTTAC
CGGAGCCGATGGCGGCATCGGTCAAGAATTCTGCCGTCACTACGCAAGAA
AGGGGGCGTCTGTGTTCGCCTGCAGATGCTCTCCCGTTTGTGGCTGCTGC
GAAACCCCGCCGCCTCTGCCCTCTTTCTCACTGGTGATGGAGTAGGCACA
ACAGGTGTAGCTGGCATGCTGTGCAGGAGAGGATCTTTGGCTACCTTTGC
TTGCCGGCTCTTGATAGGACTGCCTACCGTGTCTTCTTTCTCCTCTGTTC
CACTCATGCAAACGGTTGTTGTTACCGGAGCCGATGGCGGCATCGGTCAA
GAATTCTGCCGTCACTACGCAAGAAAGGGGGCGTCTGTGTTCGCCTGCAG
GCGAAAATCTACGCCTGCCGCGAGTTCTTTGTTCGATGGTAATCCGAACA
TCCACGTCGTGGACGGCGTCGATATTACCACCGACGCAGGGGCGGGGTGT
CTCGTCAACGCCCTCGAAAAGGCCGGCAATCCGAAGGTTGATATTTTGAT
CAACAACGCTGGTTTCATGACGCAAGCCCGGAGCTCATTGGACCTTGACG
TTTTGCGCGAGTCTATGGAGATCAACGCCTACGGGGCTTTGAGAATTACC
ACGGCTCTGCGAAAATCTACGCCTGCCGCGAGTTCTTTGTTCGATGGTAA
TCCGAACATCCACGTCGTGGACGGCGTCGATATTACCACCGACGCAGGGG
CGGGGTGTCTCGTCAACGCCCTCGAAAAGGCCGGCAATCCGAAGGTTGAT
ATTTTGATCAACAACGCTGGTTTCATGACGCAAGCCCGGAGCTCATTGGA
CCTTGACGTTTTGCGCGAGTCTATGGAGATCAACGCCTACGGGGCTTTGA
GAATTACCACGGCTCTGCTAGGCCGGAAACTGGTTGCCGCGCCCGGCGGA
AAAATCGTTCTCATCACGTCGAAGATGGGATCGATGGCGGACAACACATC
GGGTGGCGCTTATGGGCTAGGCCGGAAACTGGTTGCCGCGCCCGGCGGAA
AAATCGTTCTCATCACGTCGAAGATGGGATCGATGGCGGACAACACATCG
GGTGGCGCTTATGGGTATCGGATGAGTAAAGCGGCGCTTAATGCGGCGGG
AAAATCCCTGTCGCACGATCTGAAGGGGCAAGGCATCGGCGTCGCCATTC
TTCACCCAGGTATCGGATGAGTAAAGCGGCGCTTAATGCGGCGGGAAAAT
CCCTGTCGCACGATCTGAAGGGGCAAGGCATCGGCGTCGCCATTCTTCAC
CCAGGGTGGGTTCGGACAAAAATGACGGGCAATTCCGGTTTGGTCGACGC
GTCCGAATCAGTGGCCGGCATGACGGAAAGAATCGAGGAGCTGAACCTGT
CAAACTCGGGAACGTTTTGGGGTTTCAAGGGCGACGTGATCCCGTGGTGA
GGTGGGTTCGGACAAAAATGACGGGCAATTCCGGTTTGGTCGACGCGTCC
GAATCAGTGGCCGGCATGACGGAAAGAATCGAGGAGCTGAACCTGTCAAA
CTCGGGAACGTTTTGGGGTTTCAAGGGCGACGTGATCCCGTGGTGA
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