mRNA_P-fluviatile_contig14.2203.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-fluviatile_contig14.2203.1
Unique Name	mRNA_P-fluviatile_contig14.2203.1
Type	mRNA
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)

Homology

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: D7FNL6_ECTSI (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI)

HSP 1 Score: 693 bits (1789), Expect = 4.220e-237
Identity = 503/775 (64.90%), Postives = 562/775 (72.52%), Query Frame = 1

Query:  298 SYAPARCAEHSVGSRRQPQLXXXXXXXXXXXXXXXXLNLLAKQLSHDAAVXXXXXXXXXXXXXXXNAKGQLDHGSELTSRLXXXXXXXXXSDCFRRSALVTALSVDERVELCSGARSIGPARCAGQVRDRRIGPSXXXXXXXXXXXXXXXXXLASTPPSMPAENRVELCQGAPEGDPTXXXXXXXXXXXXXXXXXXXXXXRTASNFRAAVDCAKVARYTVGDSYGRLLNLCGDALSTAPADCAKAAFRVGANKXXXXXXXXXXXXXXXXXXFAAAPKQIPPDFRVXXXXXXXXXXXXXXXXXALVNGLRAQPEATAVCPLDPEISSVPRRVIGFPLAARLCRSASDNRPAQCARAAPLQMSDGDVEVLCATEGLPEGEDTSKCAAAALMIGFSSPGAALLCRGARSSAPADCAATAAHRLGEAGRLSXXXXXXXXXXXXXINSVSAAKIPSAETFAECKTAVPYPSGLHITDLGYDGDVLFPDQPIYATLEVWDQWGGRIDSDSSTVVRASVAIRGSNGAVVNAQGRSNTSIDGIVHFSSLSLSGPGNLTLQFYIDGYNKDSGGGAAGANVPVPLEAARIVVAETEHGSIIRRCRGIFSQLACP---STPGAGGDGAART-KGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSREGGETIN 2610
            S APA C EHSV S+R+P L                L+LL + L  +AAV XXXXXXXXXXXXX NA+ QL +G ++T R XXXXXXXXX   FRRSAL TALS DERVELC GAR+  PARCAGQVRDRRI P   XXXXXXXXXXXXXXXLASTPPS+ AE+RV LCQGA E  PT   XXXXXXXXXXXXXXXXXXX                                 A S APA CAKAAFR GA++     XXXXXXXXXXXXX  AAP+QIP D RV   XXXXXXXXXXXXX +    L+ QP+  AVCPLDPE    PRR +   LAAR+CR A D++PA CARAAPL+MSD DVEVLCA +G P GE+T+ CAAA LMIGFS   AA LCRGA S AP  CA TAAHR+GEAGRL+XXXXXXXXXXXXX NSVS A  PSA    EC+ AVP PS LHITDLG++G+ LFPDQP++ATLEVWDQWGG+I  DSSTVVRASVA+RGSNGAV NA GR NTS  G+VHFS LS SG GNLTLQF+IDG N     GAA     VPL AAR++V ETEHG+I+RRCR +FS+LACP      GA G+  +    GTG      Q + +   ATEAVSTVSGG  AAWYVMTCQQVLEENGI VAYV S ST+ + A +WYHPGIETLETGAGLPTRDQ AWERLGVDR AS RE+RRAYYRQSLLWHPDRWVR+AIHSARAQ+VF++V +AY WMV+SS+    T N
Sbjct:    5 SQAPALCVEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDG-NDSKDVGAAN----VPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPH---QVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKALERTTN 771

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A836CJW3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.920e-46
Identity = 121/316 (38.29%), Postives = 165/316 (52.22%), Query Frame = 1

Query: 1648 SAETFAECKTAVPYPSGLHITDLGY--DGDVLFPDQPIYATLEVWDQWGGRIDSDSSTVVRASVAIRGSNGAVVNAQGRSNTSIDGIVHFSSLSLSGPGNLTLQFYIDGYNKDSGGGAAGANVPVPLEAARIVVAETEHGSIIRRCRGIFSQLACPSTPGAGGDGAARTKGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSR 2589
            +A    +C+ A P  + + + +L +  +G VL+    + A LEV DQWG  ++ DS T VRAS+A RGSNGA +   GR N ++DG+V FS L+ S PGNLTL+F + G +               L +A + V ET+  +  R C  +   L CPS   A    AA                   AA E  + V    +  W  + C   L   G  VA    R+     A++WY P +E L TG G+PT   TA ERLG+   AS  +VRRAYYR+SL WHPDRW RH   + RAQ VF++VSEAYA + A ++
Sbjct:  473 TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGGAH---------------LASALLRVVETKEAAFARACGAVVRALRCPSDAAAARRAAAAELN---------------AADEIFALVPPPLS--WNAIVCGGALRNQGFRVAPGWRRA-----AWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAK 751

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A7S2SUF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.170e-34
Identity = 133/442 (30.09%), Postives = 198/442 (44.80%), Query Frame = 1

Query: 1330 SDNRPAQCARAAPLQMSDGDVEVLCATEGLPEGEDTSKCAAAALMIGFSSPGAALLCRGARSSAPADCAATAAHRLGEAGRLSXXXXXXXXXXXXXINSVSAAKIPS--AETFAE-------------CKTAVPYPSGLHITDLGYD---GDVLFPDQPIYATLEVWDQWGGRIDSDSSTVVRASVAIRGSNGAVVNAQGRSNTSIDGIVHFSSLSLSGPGNLTLQFYIDGYNKDSGGGAAGANVPVPLEAARIVVA--ETEHGSIIRRCRGIFSQLACPSTPGAGGDGAARTKGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSREG 2595
            S + P  CA  AP   SD D+  LC     P   D ++ A  +L         A LC  + S+APA CA  +   +     ++             + S +AA  P   A   A              C+TA   PSG+ I  + +D   GD +F    ++ TL+V DQ+G  +  D+ T+V A++    S GA++    RSN S+ G+V    L  S  G   L F I G                 ++  R+VV+  E +      +C   F        P    + +    G             PL   E VS ++  ++    + +C ++LEE G+ V   S    D    ++WY P +E L+TG GLPT     W RLG+  +ASAR+VR+AYYRQSL+WHPDRW  + +H   AQ+ F+++SEAY  +V+ S  G
Sbjct:  251 SGSPPMDCALTAPYGFSDSDIIALC-RHADPRASDCARSAPPSLPASIR----ARLCARSTSTAPARCAVASPFSMHRP--MANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQGRELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR---------------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAG---------QDHDPLRVQEKVSYMTWPSSLE-AMSSCSRILEEAGVRVT--SGWGGD---LWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLSSGG 654

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A7S2SUI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.820e-34
Identity = 103/314 (32.80%), Postives = 155/314 (49.36%), Query Frame = 1

Query: 1669 CKTAVPYPSGLHITDLGYD---GDVLFPDQPIYATLEVWDQWGGRIDSDSSTVVRASVAIRGSNGAVVNAQGRSNTSIDGIVHFSSLSLSGPGNLTLQFYIDGYNKDSGGGAAGANVPVPLEAARIVVA--ETEHGSIIRRCRGIFSQLACPSTPGAGGDGAARTKGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSREG 2595
            C+TA   PSG+ I  + +D   GD +F    ++ TL+V DQ+G  +  D+ T+V A++    S GA++    RSN S+ G+V    L  S  G   L F I G                 ++  R+VV+  E +      +C   F        P    + +    G             PL   E VS ++  ++    + +C ++LEE G+ V   S    D    ++WY P +E L+TG GLPT     W RLG+  +ASAR+VR+AYYRQSL+WHPDRW  + +H   AQ+ F+++SEAY  +V+ S  G
Sbjct:   12 CRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR---------------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAG---------QDHDPLRVQEKVSYMTWPSSLE-AMSSCSRILEEAGVRVT--SGWGGD---LWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLSSGG 294

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A5D6XN52_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.320e-11
Identity = 84/309 (27.18%), Postives = 131/309 (42.39%), Query Frame = 1

Query: 1666 ECKTAVPYPSGLHITDLGYDGDVLFPDQPIYATLEVWDQWGGRIDSDSSTVVRASVAIRGSNGAVVNAQGR------SNTSIDGIVHFSSLSLSGPGNLTLQFYIDGYNKDSGGGAAGANVPVPLEAARIVVAETEHGSI-IRRCRGIFSQLACPSTPGAGGDGAARTKGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHS--ARAQEVFQIVSEAY 2565
            EC+  VP P+ L I  + Y    L P   +   L V DQ+G  + S +   +R SV    + G    A  R          I+G   F+ +    PG   + F         G  AA   + +  + ARI + E     +  RRCR +F+QL C         GA RT+  G     +  +   L    +   +         V+ C+    E+   +  + + ST  + A   +H     L T A +P+   +AW  LG+D  A+  ++R AY+R+SL WHPD+W   +  S   RA +V+  V+ AY
Sbjct:  584 ECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP--TEGTAPEAGDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTF---------GPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC---------GADRTEQPGPSANDTVGEVFHLFELPSRHYLD--------VLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAY 861

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A2R5GI11_9STRA (DnaJ family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-7
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 1

Query: 2245 AWYVMT--CQQVLEENGIYVAYVSSRSTDKIRAFIWYH--PGIETLETGAGLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVR-HAIHSARAQEVFQIVSEA 2562
            AW+++   C+  L + G+ +     RS   I   ++ H   G   L  G G+PT + +A E LGV+ +A++ ++R+AYYR SL WHPDRWV  H    ++A +VFQ ++ A
Sbjct: 1092 AWWLLARGCEDELADIGVQLL----RSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A6A2X7N5_HIBSY (Putative kinesin heavy chain n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X7N5_HIBSY)

HSP 1 Score: 57.4 bits (137), Expect = 2.810e-6
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 2419 LGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSRE 2592
            LGV + ASA E+R AY RQ+L WHPDRW+++   S  A++ FQ + EAY+  V   +E
Sbjct:   12 LGVCKQASASEIRDAYRRQALKWHPDRWMKNPEESGEAKKRFQKIQEAYSGFVNFMQE 69

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A7S3MAI0_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.580e-6
Identity = 73/329 (22.19%), Postives = 124/329 (37.69%), Query Frame = 1

Query: 1765 LEVWDQWGGR-IDSDSSTVVRASVAIRGSNGAVVNA--QGRSNTSIDGIVHFSSLSLSGPGNLTLQFYID---GYNKDSGGGAAGANV---PVPLEAARIVVAETEHGSIIRRCRGIFSQLACPSTPGAGGDGAARTKGTGXXXXXSQNQQTPLAATEAVSTVSGGTAAAWYVMTCQQVLEENGIYVAYVSSRSTDKIRAFIW--YHPGIETLETGAGLPTRDQTAWERLGVDRSASA------------------------------------------REVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYAWMVASSRE 2592
             E+ DQ+G   +D     +  AS+      GAV+       +N  I G++  +SL +S  G +  + +I+   G +  S GG+   N    P  ++  R+ V E    S    C  +  Q  CP       +                  ++      + S VS       Y+          G++V      S   ++  +W  Y  G+++L TG G+P  + +  ERLG+  +A                                            +E+RRAYYR+SL WHPDRW    +++   Q  F++++EAY  +    +E
Sbjct:   64 FELLDQYGRTFLDPHQEFLFSASLNNNNPQGAVLWGIRSNYTNPKIPGMLELNSLVISQSGEVDFKIFINMRTGTSGTSSGGSGKGNAVSGPKLVDLFRLTVLEDPVVSSALPCIYLLQQTTCPLNSNTVSE-----------------WESEFPRIRSYSPVSN------YLRNVLCAEAMTGMHV-----NSFVGVQGDLWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEKE 364

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: A0A6A2WSL4_HIBSY (Putative kinesin heavy chain n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSL4_HIBSY)

HSP 1 Score: 56.2 bits (134), Expect = 1.270e-5
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1

Query: 2419 LGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYA 2568
            LGV + ASA E+R AY RQ+L WHPDRW+++   S  A++ FQ + EAY+
Sbjct:   12 LGVCKQASAYEIRDAYRRQALKWHPDRWMKNPKASGEAKQRFQCIQEAYS 61

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BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Match: M4CUQ8_BRARP (J domain-containing protein n=6 Tax=Brassica TaxID=3705 RepID=M4CUQ8_BRARP)

HSP 1 Score: 55.8 bits (133), Expect = 2.610e-5
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 1

Query: 2383 GLPTRDQTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQIVSEAYA 2568
            G+     + ++ LGV  ++SA ++RRAYY+ ++ WHPDRW +  + +  A+  FQ + EAY+
Sbjct:    4 GIKATSPSYYDFLGVAVNSSAEQIRRAYYKLAMKWHPDRWTKDPLRAGEAKRRFQQIQEAYS 65

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig14.2203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
D7FNL6_ECTSI	4.220e-237	64.90	J domain-containing protein n=2 Tax=Ectocarpus Tax...	[more]
A0A836CJW3_9STRA	4.920e-46	38.29	J domain-containing protein n=1 Tax=Tribonema minu...	[more]
A0A7S2SUF7_9STRA	3.170e-34	30.09	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2SUI0_9STRA	3.820e-34	32.80	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A5D6XN52_9STRA	4.320e-11	27.18	J domain-containing protein n=1 Tax=Pythium brassi...	[more]
A0A2R5GI11_9STRA	1.590e-7	36.94	DnaJ family protein n=1 Tax=Hondaea fermentalgiana...	[more]
A0A6A2X7N5_HIBSY	2.810e-6	48.28	Putative kinesin heavy chain n=1 Tax=Hibiscus syri...	[more]
A0A7S3MAI0_9STRA	7.580e-6	22.19	Hypothetical protein n=2 Tax=Spumella elongata Tax...	[more]
A0A6A2WSL4_HIBSY	1.270e-5	52.00	Putative kinesin heavy chain n=1 Tax=Hibiscus syri...	[more]
M4CUQ8_BRARP	2.610e-5	37.10	J domain-containing protein n=6 Tax=Brassica TaxID...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig14	contig	P-fluviatile_contig14:1774166..1777358 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	698.7
Seed ortholog evalue	3.3e-198
Seed eggNOG ortholog	2880.D7FNL6
EggNOG free text desc.	DnaJ molecular chaperone homology domain
EggNOG OGs	29M4M@1,2RUDY@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	DnaJ domain
Ec32 ortholog	Ec-01_005020.1
Exons	3
Model size	2619
Cds size	2619
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig14.2203.1	prot_P-fluviatile_contig14.2203.1	Porterinema fluviatile SAG_2381	polypeptide	P-fluviatile_contig14 1774166..1777358 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815618.9951627-CDS-P-fluviatile_contig14:1774165..1774468	1622815618.9951627-CDS-P-fluviatile_contig14:1774165..1774468	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1774166..1774468 +
1693562472.0443838-CDS-P-fluviatile_contig14:1774165..1774468	1693562472.0443838-CDS-P-fluviatile_contig14:1774165..1774468	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1774166..1774468 +
1622815619.0117745-CDS-P-fluviatile_contig14:1774772..1775131	1622815619.0117745-CDS-P-fluviatile_contig14:1774772..1775131	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1774773..1775131 +
1693562472.062788-CDS-P-fluviatile_contig14:1774772..1775131	1693562472.062788-CDS-P-fluviatile_contig14:1774772..1775131	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1774773..1775131 +
1622815619.0260184-CDS-P-fluviatile_contig14:1775401..1777358	1622815619.0260184-CDS-P-fluviatile_contig14:1775401..1777358	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1775402..1777358 +
1693562472.07414-CDS-P-fluviatile_contig14:1775401..1777358	1693562472.07414-CDS-P-fluviatile_contig14:1775401..1777358	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig14 1775402..1777358 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-fluviatile_contig14:1774166..1777358+
coding sequence from alignment at P-fluviatile_contig14:1774166..1777358+

protein sequence of mRNA_P-fluviatile_contig14.2203.1

>prot_P-fluviatile_contig14.2203.1 ID=prot_P-fluviatile_contig14.2203.1|Name=mRNA_P-fluviatile_contig14.2203.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=873bp
VSCLCGGSLDAITECSRLAPFSLTADQRMTLCKGSTSAAPAECARKANNA
APRLSGSHILELCLGEVSELPGLCVAGLSRSTAKHLSAELRVELCKDARS
YAPARCAEHSVGSRRQPQLVVDVCKGASSVAPAECLNLLAKQLSHDAAVE
ICGGAEGVGPALCANAKGQLDHGSELTSRLCRGASGPGPSDCFRRSALVT
ALSVDERVELCSGARSIGPARCAGQVRDRRIGPSEKVLLCQGASGTAPAK
CLASTPPSMPAENRVELCQGAPEGDPTAAAACLKAVPHDLPSAFAVTVCR
TASNFRAAVDCAKVARYTVGDSYGRLLNLCGDALSTAPADCAKAAFRVGA
NKDHAVVLCAGSTSLAPASCFAAAPKQIPPDFRVATCAGAQSTSPALCLA
AALVNGLRAQPEATAVCPLDPEISSVPRRVIGFPLAARLCRSASDNRPAQ
CARAAPLQMSDGDVEVLCATEGLPEGEDTSKCAAAALMIGFSSPGAALLC
RGARSSAPADCAATAAHRLGEAGRLSVCTGASSNAPARCINSVSAAKIPS
AETFAECKTAVPYPSGLHITDLGYDGDVLFPDQPIYATLEVWDQWGGRID
SDSSTVVRASVAIRGSNGAVVNAQGRSNTSIDGIVHFSSLSLSGPGNLTL
QFYIDGYNKDSGGGAAGANVPVPLEAARIVVAETEHGSIIRRCRGIFSQL
ACPSTPGAGGDGAARTKGTGGGAGNSQNQQTPLAATEAVSTVSGGTAAAW
YVMTCQQVLEENGIYVAYVSSRSTDKIRAFIWYHPGIETLETGAGLPTRD
QTAWERLGVDRSASAREVRRAYYRQSLLWHPDRWVRHAIHSARAQEVFQI
VSEAYAWMVASSREGGETINPT*

mRNA from alignment at P-fluviatile_contig14:1774166..1777358+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-fluviatile_contig14.2203.1 ID=mRNA_P-fluviatile_contig14.2203.1|Name=mRNA_P-fluviatile_contig14.2203.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3193bp|location=Sequence derived from alignment at P-fluviatile_contig14:1774166..1777358+ (Porterinema fluviatile SAG_2381)
GTATCATGTTTGTGTGGAGGGTCGCTGGATGCCATCACTGAGTGCTCTCG
GCTTGCGCCGTTCTCCCTGACTGCGGACCAACGGATGACCTTGTGCAAAG
GGTCCACGTCGGCTGCTCCTGCAGAATGCGCGAGGAAGGCAAATAACGCG
GCACCAAGACTTTCAGGCTCGCATATCCTCGAACTGTGCCTTGGGGAGGT
ATCCGAGCTTCCAGGGCTGTGCGTAGCGGGATTGTCCAGGAGCACCGCCA
AGCACCTCTCTGCGGAACTGAGGGTAGAACTTTGCAAGGATGCCCGTTCG
TACGTGAGTAGAGACAATTTCGTCAGAAGTGTGTCGTGTCATCAAAACAT
AGTCTGTTACGGCGGTGGAGCCCCCGCCGCCTTAGACGCTATTCTCACAT
GGCGCGCTGGATACACGTCCTGCTAAGATGTCCACGATATAGAGGGCCGT
CTACAAATCTTATTCGATAAGAAACTGAACGTGCACGCTCTGGCCTTAAA
TGCAAGTGAATCATGAAGCAACCGGCCTTGAAAAACCCCCATAAACCATT
CTTTGTTCAATCTTTGGCCCCGCCCATGCCGACCACGGAAACATGGCTGA
TCCCCAGGCACCGGCACGGTGCGCCGAGCACTCTGTTGGCTCCAGACGAC
AACCCCAGCTAGTGGTAGATGTGTGTAAAGGAGCATCGAGCGTAGCCCCG
GCCGAGTGTCTCAATCTCTTGGCGAAGCAACTTTCACATGACGCTGCGGT
CGAAATTTGCGGCGGAGCTGAAGGTGTAGGCCCGGCTCTATGCGCCAACG
CCAAAGGCCAGCTCGACCATGGGTCGGAGCTGACATCCAGGTTATGCCGG
GGTGCTAGCGGTCCAGGTCCTTCGGATTGCTTCCGTCGCTCGGCGCTCGT
CACCGCGCTTTCAGTAGACGAACGTGTGGAGCTGTGTAGTGGAGCAAGAA
GTATCGGTCCAGCAAGGTACGACCCGCTACTTATGCCTTGTCCAGCCTAT
CGAGCTTTGGTCATCCACCCTGTGGTCGGGTACTCTTAACTTAGCGACTG
CAAGTTCAAAATTTAATCATGGAATATTCAGAAACAAAACAAATCGGTCA
TGCTCGAAGACTTCACCTCGCAATAAAAGTATAAAAGCACGAAATTTCGC
CAAAATCAACGCAGTGCGAGCGCGCTGCACTTGCCCGCTATTTCGCCCGA
CTTTCCGCCCTTTTGAATGAATTCACTAAAATGTAGATGCGCCGGACAAG
TGAGAGATCGCCGTATTGGTCCTTCAGAGAAGGTTTTGCTTTGCCAAGGA
GCATCCGGTACCGCTCCGGCTAAATGTCTTGCATCGACACCCCCATCGAT
GCCCGCCGAGAACCGCGTGGAGCTGTGCCAGGGAGCGCCCGAGGGAGACC
CTACCGCTGCTGCTGCTTGTCTCAAGGCGGTTCCGCATGATCTCCCTTCC
GCTTTTGCGGTGACAGTTTGCCGCACAGCAAGCAACTTCAGGGCCGCCGT
GGATTGCGCGAAGGTGGCTCGCTACACCGTCGGAGATTCCTATGGCAGGC
TGTTGAACTTGTGCGGCGATGCATTGTCCACGGCTCCCGCCGACTGCGCG
AAGGCGGCCTTCCGCGTTGGAGCCAATAAAGACCACGCCGTCGTCTTGTG
TGCCGGATCGACTTCGCTGGCTCCGGCATCGTGCTTCGCGGCAGCACCAA
AGCAAATCCCGCCGGACTTCCGTGTTGCGACCTGTGCTGGTGCGCAGTCT
ACCAGCCCGGCGCTCTGTCTCGCCGCCGCGCTGGTGAATGGCTTGCGAGC
ACAGCCAGAAGCGACAGCTGTGTGTCCGCTGGACCCCGAGATCAGCAGCG
TTCCTAGGAGAGTCATTGGCTTTCCACTGGCTGCCCGCTTGTGCCGGAGC
GCATCAGATAATAGGCCGGCCCAATGTGCGCGAGCGGCGCCTCTTCAAAT
GAGCGACGGAGATGTGGAAGTCCTTTGCGCGACCGAGGGGCTACCTGAGG
GTGAAGACACTTCAAAGTGCGCAGCTGCTGCCTTGATGATTGGCTTCAGT
AGCCCAGGCGCTGCTTTGTTGTGCCGGGGGGCTCGCTCAAGTGCGCCCGC
CGACTGCGCTGCAACAGCGGCTCACCGCTTAGGGGAAGCCGGGCGGCTCT
CTGTTTGCACTGGAGCGTCGAGTAACGCCCCTGCGCGATGCATAAACTCT
GTATCGGCCGCAAAAATTCCCTCCGCCGAGACATTTGCCGAGTGCAAGAC
AGCCGTTCCCTATCCATCGGGACTTCACATCACAGACCTTGGCTACGACG
GGGATGTGTTGTTCCCGGACCAGCCAATTTACGCAACATTGGAGGTTTGG
GATCAGTGGGGAGGCAGAATTGATTCGGACAGCTCAACCGTAGTGCGCGC
TTCTGTCGCGATCCGTGGCTCAAACGGTGCTGTCGTGAACGCACAGGGAC
GCTCCAATACTTCTATCGACGGTATCGTCCATTTCTCTAGCTTATCGCTC
AGCGGGCCGGGGAACCTAACGCTGCAGTTCTACATCGACGGATACAATAA
AGACAGTGGTGGTGGGGCAGCCGGCGCTAACGTTCCGGTCCCTTTGGAGG
CTGCCAGAATCGTCGTTGCAGAGACAGAGCACGGCTCTATCATCCGGCGA
TGCAGAGGGATTTTCAGCCAACTTGCTTGCCCCTCGACCCCCGGGGCTGG
AGGTGACGGGGCAGCAAGAACGAAGGGGACTGGTGGAGGGGCAGGGAATT
CTCAGAATCAGCAAACCCCACTCGCTGCTACAGAAGCAGTGTCCACGGTT
TCCGGGGGAACGGCAGCTGCGTGGTACGTCATGACTTGCCAACAAGTTCT
GGAAGAGAATGGCATATATGTCGCGTATGTCTCTTCTCGGAGCACGGACA
AAATCCGTGCTTTCATCTGGTATCACCCGGGCATCGAGACTTTGGAGACG
GGGGCTGGGCTGCCGACTCGAGATCAAACTGCGTGGGAAAGGCTGGGGGT
GGATCGGAGTGCAAGTGCTCGCGAAGTTCGGCGCGCGTACTACCGCCAGT
CGCTCCTCTGGCATCCGGACCGCTGGGTGCGCCACGCGATACACTCTGCG
CGCGCTCAGGAGGTGTTCCAGATCGTGAGCGAAGCCTACGCCTGGATGGT
TGCCAGCTCTCGTGAAGGGGGGGAGACGATCAACCCCACATGA

Coding sequence (CDS) from alignment at P-fluviatile_contig14:1774166..1777358+

>mRNA_P-fluviatile_contig14.2203.1 ID=mRNA_P-fluviatile_contig14.2203.1|Name=mRNA_P-fluviatile_contig14.2203.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5238bp|location=Sequence derived from alignment at P-fluviatile_contig14:1774166..1777358+ (Porterinema fluviatile SAG_2381)
GTATCATGTTTGTGTGGAGGGTCGCTGGATGCCATCACTGAGTGCTCTCG
GCTTGCGCCGTTCTCCCTGACTGCGGACCAACGGATGACCTTGTGCAAAG
GGTCCACGTCGGCTGCTCCTGCAGAATGCGCGAGGAAGGCAAATAACGCG
GCACCAAGACTTTCAGGCTCGCATATCCTCGAACTGTGCCTTGGGGAGGT
ATCCGAGCTTCCAGGGCTGTGCGTAGCGGGATTGTCCAGGAGCACCGCCA
AGCACCTCTCTGCGGAACTGAGGGTAGAACTTTGCAAGGATGCCCGTTCG
TACGTATCATGTTTGTGTGGAGGGTCGCTGGATGCCATCACTGAGTGCTC
TCGGCTTGCGCCGTTCTCCCTGACTGCGGACCAACGGATGACCTTGTGCA
AAGGGTCCACGTCGGCTGCTCCTGCAGAATGCGCGAGGAAGGCAAATAAC
GCGGCACCAAGACTTTCAGGCTCGCATATCCTCGAACTGTGCCTTGGGGA
GGTATCCGAGCTTCCAGGGCTGTGCGTAGCGGGATTGTCCAGGAGCACCG
CCAAGCACCTCTCTGCGGAACTGAGGGTAGAACTTTGCAAGGATGCCCGT
TCGTACGCACCGGCACGGTGCGCCGAGCACTCTGTTGGCTCCAGACGACA
ACCCCAGCTAGTGGTAGATGTGTGTAAAGGAGCATCGAGCGTAGCCCCGG
CCGAGTGTCTCAATCTCTTGGCGAAGCAACTTTCACATGACGCTGCGGTC
GAAATTTGCGGCGGAGCTGAAGGTGTAGGCCCGGCTCTATGCGCCAACGC
CAAAGGCCAGCTCGACCATGGGTCGGAGCTGACATCCAGGTTATGCCGGG
GTGCTAGCGGTCCAGGTCCTTCGGATTGCTTCCGTCGCTCGGCGCTCGTC
ACCGCGCTTTCAGTAGACGAACGTGTGGAGCTGTGTAGTGGAGCAAGAAG
TATCGGTCCAGCAAGGCACCGGCACGGTGCGCCGAGCACTCTGTTGGCTC
CAGACGACAACCCCAGCTAGTGGTAGATGTGTGTAAAGGAGCATCGAGCG
TAGCCCCGGCCGAGTGTCTCAATCTCTTGGCGAAGCAACTTTCACATGAC
GCTGCGGTCGAAATTTGCGGCGGAGCTGAAGGTGTAGGCCCGGCTCTATG
CGCCAACGCCAAAGGCCAGCTCGACCATGGGTCGGAGCTGACATCCAGGT
TATGCCGGGGTGCTAGCGGTCCAGGTCCTTCGGATTGCTTCCGTCGCTCG
GCGCTCGTCACCGCGCTTTCAGTAGACGAACGTGTGGAGCTGTGTAGTGG
AGCAAGAAGTATCGGTCCAGCAAGATGCGCCGGACAAGTGAGAGATCGCC
GTATTGGTCCTTCAGAGAAGGTTTTGCTTTGCCAAGGAGCATCCGGTACC
GCTCCGGCTAAATGTCTTGCATCGACACCCCCATCGATGCCCGCCGAGAA
CCGCGTGGAGCTGTGCCAGGGAGCGCCCGAGGGAGACCCTACCGCTGCTG
CTGCTTGTCTCAAGGCGGTTCCGCATGATCTCCCTTCCGCTTTTGCGGTG
ACAGTTTGCCGCACAGCAAGCAACTTCAGGGCCGCCGTGGATTGCGCGAA
GGTGGCTCGCTACACCGTCGGAGATTCCTATGGCAGGCTGTTGAACTTGT
GCGGCGATGCATTGTCCACGGCTCCCGCCGACTGCGCGAAGGCGGCCTTC
CGCGTTGGAGCCAATAAAGACCACGCCGTCGTCTTGTGTGCCGGATCGAC
TTCGCTGGCTCCGGCATCGTGCTTCGCGGCAGCACCAAAGCAAATCCCGC
CGGACTTCCGTGTTGCGACCTGTGCTGGTGCGCAGTCTACCAGCCCGGCG
CTCTGTCTCGCCGCCGCGCTGGTGAATGGCTTGCGAGCACAGCCAGAAGC
GACAGCTGTGTGTCCGCTGGACCCCGAGATCAGCAGCGTTCCTAGGAGAG
TCATTGGCTTTCCACTGGCTGCCCGCTTGTGCCGGAGCGCATCAGATAAT
AGGCCGGCCCAATGTGCGCGAGCGGCGCCTCTTCAAATGAGCGACGGAGA
TGTGGAAGTCCTTTGCGCGACCGAGGGGCTACCTGAGGGTGAAGACACTT
CAAAGTGCGCAGCTGCTGCCTTGATGATTGGCTTCAGTAGCCCAGGCGCT
GCTTTGTTGTGCCGGGGGGCTCGCTCAAGTGCGCCCGCCGACTGCGCTGC
AACAGCGGCTCACCGCTTAGGGGAAGCCGGGCGGCTCTCTGTTTGCACTG
GAGCGTCGAGTAACGCCCCTGCGCGATGCATAAACTCTGTATCGGCCGCA
AAAATTCCCTCCGCCGAGACATTTGCCGAGTGCAAGACAGCCGTTCCCTA
TCCATCGGGACTTCACATCACAGACCTTGGCTACGACGGGGATGTGTTGT
TCCCGGACCAGCCAATTTACGCAACATTGGAGGTTTGGGATCAGTGGGGA
GGCAGAATTGATTCGGACAGCTCAACCGTAGTGCGCGCTTCTGTCGCGAT
CCGTGGCTCAAACGGTGCTGTCGTGAACGCACAGGGACGCTCCAATACTT
CTATCGACGGTATCGTCCATTTCTCTAGCTTATCGCTCAGCGGGCCGGGG
AACCTAACGCTGCAGTTCTACATCGACGGATACAATAAAGACAGTGGTGG
TGGGGCAGCCGGCGCTAACGTTCCGGTCCCTTTGGAGGCTGCCAGAATCG
TCGTTGCAGAGACAGAGCACGGCTCTATCATCCGGCGATGCAGAGGGATT
TTCAGCCAACTTGCTTGCCCCTCGACCCCCGGGGCTGGAGGTGACGGGGC
AGCAAGAACGAAGGGGACTGGTGGAGGGGCAGGGAATTCTCAGAATCAGC
AAACCCCACTCGCTGCTACAGAAGCAGTGTCCACGGTTTCCGGGGGAACG
GCAGCTGCGTGGTACGTCATGACTTGCCAACAAGTTCTGGAAGAGAATGG
CATATATGTCGCGTATGTCTCTTCTCGGAGCACGGACAAAATCCGTGCTT
TCATCTGGTATCACCCGGGCATCGAGACTTTGGAGACGGGGGCTGGGCTG
CCGACTCGAGATCAAACTGCGTGGGAAAGGCTGGGGGTGGATCGGAGTGC
AAGTGCTCGCGAAGTTCGGCGCGCGTACTACCGCCAGTCGCTCCTCTGGC
ATCCGGACCGCTGGGTGCGCCACGCGATACACTCTGCGCGCGCTCAGGAG
GTGTTCCAGATCGTGAGCGAAGCCTACGCCTGGATGGTTGCCAGCTCTCG
TGAAGGGGGGGAGACGATCAACCCCACATGAATGCGCCGGACAAGTGAGA
GATCGCCGTATTGGTCCTTCAGAGAAGGTTTTGCTTTGCCAAGGAGCATC
CGGTACCGCTCCGGCTAAATGTCTTGCATCGACACCCCCATCGATGCCCG
CCGAGAACCGCGTGGAGCTGTGCCAGGGAGCGCCCGAGGGAGACCCTACC
GCTGCTGCTGCTTGTCTCAAGGCGGTTCCGCATGATCTCCCTTCCGCTTT
TGCGGTGACAGTTTGCCGCACAGCAAGCAACTTCAGGGCCGCCGTGGATT
GCGCGAAGGTGGCTCGCTACACCGTCGGAGATTCCTATGGCAGGCTGTTG
AACTTGTGCGGCGATGCATTGTCCACGGCTCCCGCCGACTGCGCGAAGGC
GGCCTTCCGCGTTGGAGCCAATAAAGACCACGCCGTCGTCTTGTGTGCCG
GATCGACTTCGCTGGCTCCGGCATCGTGCTTCGCGGCAGCACCAAAGCAA
ATCCCGCCGGACTTCCGTGTTGCGACCTGTGCTGGTGCGCAGTCTACCAG
CCCGGCGCTCTGTCTCGCCGCCGCGCTGGTGAATGGCTTGCGAGCACAGC
CAGAAGCGACAGCTGTGTGTCCGCTGGACCCCGAGATCAGCAGCGTTCCT
AGGAGAGTCATTGGCTTTCCACTGGCTGCCCGCTTGTGCCGGAGCGCATC
AGATAATAGGCCGGCCCAATGTGCGCGAGCGGCGCCTCTTCAAATGAGCG
ACGGAGATGTGGAAGTCCTTTGCGCGACCGAGGGGCTACCTGAGGGTGAA
GACACTTCAAAGTGCGCAGCTGCTGCCTTGATGATTGGCTTCAGTAGCCC
AGGCGCTGCTTTGTTGTGCCGGGGGGCTCGCTCAAGTGCGCCCGCCGACT
GCGCTGCAACAGCGGCTCACCGCTTAGGGGAAGCCGGGCGGCTCTCTGTT
TGCACTGGAGCGTCGAGTAACGCCCCTGCGCGATGCATAAACTCTGTATC
GGCCGCAAAAATTCCCTCCGCCGAGACATTTGCCGAGTGCAAGACAGCCG
TTCCCTATCCATCGGGACTTCACATCACAGACCTTGGCTACGACGGGGAT
GTGTTGTTCCCGGACCAGCCAATTTACGCAACATTGGAGGTTTGGGATCA
GTGGGGAGGCAGAATTGATTCGGACAGCTCAACCGTAGTGCGCGCTTCTG
TCGCGATCCGTGGCTCAAACGGTGCTGTCGTGAACGCACAGGGACGCTCC
AATACTTCTATCGACGGTATCGTCCATTTCTCTAGCTTATCGCTCAGCGG
GCCGGGGAACCTAACGCTGCAGTTCTACATCGACGGATACAATAAAGACA
GTGGTGGTGGGGCAGCCGGCGCTAACGTTCCGGTCCCTTTGGAGGCTGCC
AGAATCGTCGTTGCAGAGACAGAGCACGGCTCTATCATCCGGCGATGCAG
AGGGATTTTCAGCCAACTTGCTTGCCCCTCGACCCCCGGGGCTGGAGGTG
ACGGGGCAGCAAGAACGAAGGGGACTGGTGGAGGGGCAGGGAATTCTCAG
AATCAGCAAACCCCACTCGCTGCTACAGAAGCAGTGTCCACGGTTTCCGG
GGGAACGGCAGCTGCGTGGTACGTCATGACTTGCCAACAAGTTCTGGAAG
AGAATGGCATATATGTCGCGTATGTCTCTTCTCGGAGCACGGACAAAATC
CGTGCTTTCATCTGGTATCACCCGGGCATCGAGACTTTGGAGACGGGGGC
TGGGCTGCCGACTCGAGATCAAACTGCGTGGGAAAGGCTGGGGGTGGATC
GGAGTGCAAGTGCTCGCGAAGTTCGGCGCGCGTACTACCGCCAGTCGCTC
CTCTGGCATCCGGACCGCTGGGTGCGCCACGCGATACACTCTGCGCGCGC
TCAGGAGGTGTTCCAGATCGTGAGCGAAGCCTACGCCTGGATGGTTGCCA
GCTCTCGTGAAGGGGGGGAGACGATCAACCCCACATGA