mRNA_P-fluviatile_contig14.2164.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.010e-66 Identity = 119/185 (64.32%), Postives = 130/185 (70.27%), Query Frame = 1
Query: 61 LVPIEVLEKGFEGDIRLWTVAGLRTFNMYRLISDRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNR------------------------------------YGMHFMLFVGVDSENRTVVFAQGFFS 507
+VP E LE F+GDIR WT+AGL+ F+MYRLIS+ +KPLQLGEPGRQKV QRE + TPTDALDL+SELKD AGCYVKYDTD LHRLKHVFWSTGQQQV ARQWGGIVLQDNTALTNR YGMHFMLF+GVDSEN+TVVFAQGFFS
Sbjct: 1 MVPGEDLEARFKGDIRRWTLAGLKQFDMYRLISELVKPLQLGEPGRQKV-------QRECWSTPTDALDLVSELKDMAGCYVKYDTDGLHRLKHVFWSTGQQQVFARQWGGIVLQDNTALTNRVLVLIRLIFATGKMSDEHPVRLRFIQPRAFASRSCRYGMHFMLFIGVDSENKTVVFAQGFFS 178
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.440e-35 Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 1 VCLTHVDGCTSEPTAKAKKN--LVPIEVLEKGFEGDIRLWTVAGLRTFNMYRLISDRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
V L H C + AK K+ +VP+E LEK + DI+ T+ G+R F MYR I + +KP +LG G +KVRNM KV R + + TDAL+L+++L + VK+++D H L+ + W++ +Q + AR +GGIV+QDNT L NRY LFVGVDSEN+T +FAQG S
Sbjct: 726 VNLEHHADCEMQHVAKKHKDDSVVPLEELEK-WADDIKSMTLGGVRPFTMYRCIGENIKPRKLGTRGVRKVRNMSDKVSRGRWASKTDALELVADL-ERGPATVKWESDANHVLRSIMWASPEQIMLARTYGGIVIQDNTCLINRYDFKLCLFVGVDSENKTGIFAQGLLS 894
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI) HSP 1 Score: 120 bits (300), Expect = 1.900e-28 Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 142 MYRLISDRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
MYR I++ +KP +LG G +KVRNM KV EL+ + DAL+L++EL + VK++ D + L+ + W++ +Q + AR +GG+V+QDNT LTNRY LFVGVDSEN+T VFAQGFFS
Sbjct: 1 MYRCIAESIKPQKLGPRGARKVRNMSRKVTGELWASSGDALELVAEL-ERGNETVKWELDAENILRSIMWASPEQILLARTYGGVVIQDNTCLTNRYNNKLCLFVGVDSENKTQVFAQGFFS 121
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001C720B58 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C720B58) HSP 1 Score: 65.5 bits (158), Expect = 1.840e-9 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 208 RNMVAKVQRELFYTPTDALDL-ISELKDTAGCYVKY-DTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
RN + K + +DAL++ ++D +V Y D D+ RL++VFW+ + + +G +VL+D T LTNRYGM F FVGV+ ++++F G S
Sbjct: 204 RNYIDKARFLKLGRGSDALNVYFKRMRDQNDGFVSYMDVDDDERLRNVFWADVPSRTAYEYFGDVVLKDTTYLTNRYGMPFAPFVGVNHHGQSILFGAGLLS 305
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001C717DE7 (protein FAR-RED IMPAIRED RESPONSE 1-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C717DE7) HSP 1 Score: 65.5 bits (158), Expect = 2.110e-9 Identity = 38/121 (31.40%), Postives = 61/121 (50.41%), Query Frame = 1
Query: 145 YRLISDRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
YR D+ + L+LG G +R+ A++Q + G + D D+ RLK+VFW+ + + + + +G +V D T LTNRYGM F FVGV+ ++++F G S
Sbjct: 267 YRNYIDKARYLRLGAGGAGALRDYFARMQYK-----------------NPGFFALMDLDDDGRLKNVFWADPRSRAAYQDFGDVVTFDTTYLTNRYGMPFAPFVGVNHHRQSILFGAGLIS 370
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: A0A2I4FHD7_JUGRE (Protein FAR1-RELATED SEQUENCE n=1 Tax=Juglans regia TaxID=51240 RepID=A0A2I4FHD7_JUGRE) HSP 1 Score: 65.5 bits (158), Expect = 2.220e-9 Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 1
Query: 160 DRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
D+ + L+LG+ G +R ++Q + G Y D D+ RLK+VFW+ G+ + + +G +V D T LTNRYGM F FVGV+ +++ F G S
Sbjct: 30 DKARVLRLGKGGADALRQYFERMQYK-----------------NDGFYSSMDIDDEGRLKNVFWADGRSRAAYGYFGDVVTFDTTYLTNRYGMSFAPFVGVNHHGQSIFFGAGLIS 128
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001C71A331 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C71A331) HSP 1 Score: 65.5 bits (158), Expect = 2.330e-9 Identity = 36/116 (31.03%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 160 DRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
D+ + L+LG+ G + R A++Q + G + D D+ RLK+VFW+ + + + + WG +V D T LTNRYGM F FVGV+ ++++ G S
Sbjct: 324 DKARHLRLGKGGAEAHRQYFARMQYK-----------------NDGFFSDIDHDDDGRLKNVFWANARSRAAYKYWGDVVTFDTTYLTNRYGMPFAPFVGVNHHGQSILLGAGLIS 422
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001C71BFED (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C71BFED) HSP 1 Score: 64.7 bits (156), Expect = 4.920e-9 Identity = 36/116 (31.03%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 160 DRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
D+++ L+LG G +R+ A++Q + G + D D+ RLK+VFW+ + + + + +G +V D T LTNRYGM F FVGV+ ++++F G S
Sbjct: 362 DKVRHLRLGAGGAGALRDYFARMQYK-----------------NPGFFALIDLDDDGRLKNVFWADPRSRAAYQDFGDVVTFDTTYLTNRYGMPFAPFVGVNHHGKSILFGAGLIS 460
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001B7F65BE (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7F65BE) HSP 1 Score: 63.5 bits (153), Expect = 5.060e-9 Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 160 DRLKPLQLGEPGRQKVRNMVAKVQRELFYTPTDALDLISELKDTAGCYVKYDTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
D+ K LQLG+ G ++ ++Q + G + D D+ RLK+VFW+ + + S + +G +V D T LTNRYGM F LFVGV+ ++++ G S
Sbjct: 48 DKTKHLQLGKGGTGALQEYFLRMQYK-----------------NLGFFALMDLDDDGRLKNVFWADPRSRASYQYFGDVVTFDTTYLTNRYGMSFALFVGVNHHIQSILLGAGLIS 146
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Match: UPI001BF5887B (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF5887B) HSP 1 Score: 63.2 bits (152), Expect = 1.560e-8 Identity = 38/114 (33.33%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 175 LQLGEPGRQKVRNMVAKVQR-ELFYTPTDAL-DLISELKDTAGCYVKY-DTDELHRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMHFMLFVGVDSENRTVVFAQGFFS 507
L+L + + RN + K + L +DAL + ++D +V Y D D+ RL++VFW+ + + + +G +V D T LTNRYGM F FVGV+ ++++F G S
Sbjct: 119 LELNDRAEKDCRNYIDKARYLRLGKGGSDALNEYFKRMRDQNDGFVFYMDVDDDGRLRNVFWADARSRAAYEYFGDVVSFDTTYLTNRYGMPFAPFVGVNHHGQSILFGAGLLS 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2164.1 >prot_P-fluviatile_contig14.2164.1 ID=prot_P-fluviatile_contig14.2164.1|Name=mRNA_P-fluviatile_contig14.2164.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=169bp VCLTHVDGCTSEPTAKAKKNLVPIEVLEKGFEGDIRLWTVAGLRTFNMYRback to top mRNA from alignment at P-fluviatile_contig14:1429946..1430919+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2164.1 ID=mRNA_P-fluviatile_contig14.2164.1|Name=mRNA_P-fluviatile_contig14.2164.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=974bp|location=Sequence derived from alignment at P-fluviatile_contig14:1429946..1430919+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1429946..1430919+ >mRNA_P-fluviatile_contig14.2164.1 ID=mRNA_P-fluviatile_contig14.2164.1|Name=mRNA_P-fluviatile_contig14.2164.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1014bp|location=Sequence derived from alignment at P-fluviatile_contig14:1429946..1430919+ (Porterinema fluviatile SAG_2381)back to top |