prot_P-fluviatile_contig14.2094.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig14.2094.1
Unique Name	prot_P-fluviatile_contig14.2094.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	240

Homology

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 9.180e-117
Identity = 172/229 (75.11%), Postives = 192/229 (83.84%), Query Frame = 0

Query:   10 ALAFLRPSDAFVAPSASALSHAVGGSTSSARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGILEHIISRL 238
            A   +  S AFVAP        +    SS  R A++ + +M   +D+ ASLPGAPFGMAAEGKYFDPAGLA+ QD ETIKKWREAE+KHGRVSMLAA+GILVSEVFHP FMGP YIGPAVEHAQQIATVYPLFWV S+ +IA+IEGQTIK+AWG+VSPVTGVGNLK +YYPGDLGFDPLGLAPKDG DFRLIQSQELDLGRYAMIGVLGMI QE VDG+GILEHI+SR+
Sbjct:   11 AATLIASSAAFVAP--------IAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILEHIVSRI 231

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 6.470e-64
Identity = 112/222 (50.45%), Postives = 150/222 (67.57%), Query Frame = 0

Query:   10 ALAFLRPSDAFVAPSASALSHAVGGSTSSARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGIL 231
            A   +  S AFVAP A            SA  ++S+ +++M+  +D+ A+LPGAPFG   +GK FDP  L+   D   IKKWREAEIKHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV S+  +A+IE  TI  A+ + S VTG G LKEDY PGDLGFDPL L P+D     +++++EL+ GR AMIG+ GM+ QE ++   IL
Sbjct:   11 AATLIASSTAFVAPMA----------VRSAAPASSSSALKMSAGSDYVATLPGAPFG---DGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADIL 219

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 7.190e-62
Identity = 101/190 (53.16%), Postives = 140/190 (73.68%), Query Frame = 0

Query:   36 TSSARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECV 225
            T SAR +++A   RM+  +D+ ++LPGAPF   A+GK +DP GL+S+ D E IKKWREAEIKHGRV+MLA++G+LV+E FHP F+GP YIGPA+ H ++I   +P FW  ++  IAW+E + I   +  + PVTG G ++ DY PGDLGFDPLGLAP+D  +  +++++EL+ GR AMIG+ GMI QE V
Sbjct:   80 TLSARPTSTA--ARMSAGSDYVSTLPGAPF---ADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELV 264

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.240e-61
Identity = 109/222 (49.10%), Postives = 146/222 (65.77%), Query Frame = 0

Query:   10 ALAFLRPSDAFVAPSASALSHAVGGSTSSARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGIL 231
            A   +  S AFVAP A            SA  ++SA +++M+  +D+ A+LPGAPFG   +GK FDP  L+   +   IK WREAEIKHGRV+MLA +G++V+E +HP FMGP YIGPAV+H Q+I+  +P FW  S+  +A+IE  TI  A+   SPVTG G L+++Y PGDLGFDPL L PKD      +Q++EL+ GR AMIG+ GM+ QE V+   IL
Sbjct:   12 AATLIASSTAFVAPMA----------VRSAAPASSASALKMSAGSDYVATLPGAPFG---DGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADIL 220

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.560e-60
Identity = 110/224 (49.11%), Postives = 149/224 (66.52%), Query Frame = 0

Query:   10 ALAFLRPSDAFVAPSASALSHAVGGSTSSARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGILEH 233
            A A +  S AFVAP A            SA  +++A +++M+  +D+ A+LPGAPF   ++GK FDP  L+       IKKWREAEIKHGRV+MLA++GILV+E +HP FMG  +IGPA+ H Q+I+  +P FW  S+  +A+IE  TI  A+ + S VTG G LKEDY PGDLGFDPL L P       +++++EL+ GR AMIG+ GM+AQE V+GQ IL +
Sbjct:   11 AAALIASSTAFVAPVA----------VRSAAPASAASALKMSAGSDYVATLPGAPF---SDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPN 221

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 7.370e-60
Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 0

Query:   38 SARRSASACSVRMAGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGIL 231
            SA  ++SA +++M+   D+ A+LPG      A GK FD   LA   D   IK WREAEIKHGRV+MLA +G++V+E +HPFFMGP YIGPAV+H Q+I   +P FW  S+  +A+IE  TIK A+   SPVTG G L+++Y PGDLGFDP  + PKD      +Q++EL+ GR AMIG++GM+ QE V+GQ IL
Sbjct:   30 SAAPASSASALKMSAGTDYLATLPG------ANGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDIL 217

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 4.110e-54
Identity = 88/158 (55.70%), Postives = 115/158 (72.78%), Query Frame = 0

Query:   74 FDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGIL 231
            FDP GL+       IKKWREAEIKHGRV+MLA++G++V+E +HPFFMGP YIGPAV+H Q+I+  +P FW  S+  +A++E  TI  A+ + S VTG G LKEDY PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+AQE V+   IL
Sbjct:   38 FDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 195

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 3.790e-53
Identity = 87/163 (53.37%), Postives = 113/163 (69.33%), Query Frame = 0

Query:   72 KYFDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGILEHI 234
            K FDP GLA   +   IK WREAEIKHGRV+MLA++G+LV+E +HPFFMGP YIGPAV+H Q+I+  +P FW  S+  +A IE  TI  A+   S VTG G L+++Y PGDLGFDPL L P D      +Q++EL+ GR AMIG+ G + QE V+   IL+ +
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNILDFL 177

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 6.760e-52
Identity = 89/158 (56.33%), Postives = 115/158 (72.78%), Query Frame = 0

Query:   74 FDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQGIL 231
            FDP GL+       IKKWREAEIKHGRV+MLA++G++V+E +HPFFMGP YIGPAV+H Q+I+  +P FW  S+  +A+IE  TI  A+ + S VTG G LKEDY PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+AQE V+   IL
Sbjct:  234 FDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 391

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BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Match: A0A7R9U0X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0X8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 8.230e-50
Identity = 86/160 (53.75%), Postives = 110/160 (68.75%), Query Frame = 0

Query:   74 FDPAGLASKQDDETIKKWREAEIKHGRVSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLIAWIEGQTIKNAWGSVSPVTG----VGNLKEDYYPGDLGFDPLGLAPKDGLDFRLIQSQELDLGRYAMIGVLGMIAQECVDGQG 229
            FDP GL++  DD T+KK++EAE+KHGR++MLAA+GILV E FHP F G +  GPA+   QQ+  VYPLFWV   + +A++EG TI   W S+         V  LKEDY PGD+GFDPLGL PKD   F  ++++EL+  R AMIGV GM+AQE V G G
Sbjct:   46 FDPLGLSTDLDDMTLKKYQEAELKHGRIAMLAALGILVQESFHPLFGGAIS-GPAIFEFQQVDNVYPLFWVAFGTAVAFVEGTTINQGWESIRETKARGADVAGLKEDYTPGDIGFDPLGLCPKDEAGFAEMRTKELNHCRLAMIGVAGMVAQELVLGPG 204

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig14.2094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQG7_ECTSI	9.180e-117	75.11	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q6_ECTSI	6.470e-64	50.45	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G5B4_ECTSI	7.190e-62	53.16	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	1.240e-61	49.10	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	1.560e-60	49.11	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	7.370e-60	52.06	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	4.110e-54	55.70	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	3.790e-53	53.37	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	6.760e-52	56.33	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A7R9U0X8_9STRA	8.230e-50	53.75	Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 65..239 e-value: 3.4E-36 score: 127.0
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..223 e-value: 7.9E-34 score: 117.5
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 35..238
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..239
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.504
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 45..236
None	No IPR available	TMHMM	TMhelix		coord: 135..153
None	No IPR available	TMHMM	TMhelix		coord: 98..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig14	contig	P-fluviatile_contig14:906308..909062 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig14.2094.1	mRNA_P-fluviatile_contig14.2094.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig14 906219..909508 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig14.2094.1 ID=prot_P-fluviatile_contig14.2094.1|Name=mRNA_P-fluviatile_contig14.2094.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=240bp
MKFATCSAAALAFLRPSDAFVAPSASALSHAVGGSTSSARRSASACSVRM
AGQNDFCASLPGAPFGMAAEGKYFDPAGLASKQDDETIKKWREAEIKHGR
VSMLAAMGILVSEVFHPFFMGPVYIGPAVEHAQQIATVYPLFWVGSVSLI
AWIEGQTIKNAWGSVSPVTGVGNLKEDYYPGDLGFDPLGLAPKDGLDFRL
IQSQELDLGRYAMIGVLGMIAQECVDGQGILEHIISRLS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln