mRNA_P-fluviatile_contig14.2088.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: D7FNF5_ECTSI (Possible ferredoxin (2Fe-2S) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF5_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 1.280e-137 Identity = 233/321 (72.59%), Postives = 256/321 (79.75%), Query Frame = 1
Query: 1 CAAFTLLPV-FNVPSSLARELDAMGHVCC---RSNSARGIPDTSRSLPGWRRGRSAGGSHMPVSSLGAAKDWLKGGSQGKYGPEXXXXXXXXXXXXXXXXXXXXXXXENSIDPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQNLVGAPFDAAMDALIALDGPDVEFALFRGTTDELKELAGATAPPAEITVTVKQDGKPDVALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
CAAFTL P + + S + A HV R R P RR RS GGS +P +LGAAKDWLKGGSQGK XXXXXXXXXXXXXXX E +DPR+Y+VRIARATGIEWGTDISFSWVYIRAL PDGAAANCG+ISVGDQLIA+NDQ L GAPFD AMDA+IAL+G DVEF FRG+T+ELK++ GA APPAEITVTVKQDGKP++ALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIV I+EGLE TTIRS+DES+TLR+NP NYRLSCVTNMYDDVTVTVFPPV A+QWTR
Sbjct: 14 CAAFTLSPATWLLSSQRSCAFSAAEHVSSPQRRCXXXXXXXXXXRCQPDRRRQRSPGGSRVPSFALGAAKDWLKGGSQGKSXXXXXXXXXXXXXXXXXXEVKKGPNGEE-LDPRLYSVRIARATGIEWGTDISFSWVYIRALQPDGAAANCGEISVGDQLIAINDQTLAGAPFDVAMDAMIALEGTDVEFTFFRGSTEELKKVVGAEAPPAEITVTVKQDGKPELALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVAIDEGLESTTIRSVDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGAAQWTR 333
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A6S9LXT1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LXT1_HETAK) HSP 1 Score: 257 bits (656), Expect = 1.440e-77 Identity = 123/215 (57.21%), Postives = 158/215 (73.49%), Query Frame = 1
Query: 310 ENSIDPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQNLVGAPFDAAMDALIALDGPDVEFALFRGTTDELKELAGATAPPAEITVTVKQDGK-PDVALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
E DPR+YN+ ++RATGI+WGTD+SF WVY+ + P GAA QI G QLIAVN Q+++GA FD AM AL A DG +V FRGT +EL+E + P+ IT+TV++ G+ P+ +TAP+GANLRD L N INVYQS+TRWTNCKGKQLCGTCIV + EG + T+ R +DE++TLR+NP YRLSCVTNM+ D+TV +P + A QWTR
Sbjct: 77 EGEDDPRLYNINLSRATGIDWGTDLSFRWVYVMNIEPGGAADLTDQIKKGHQLIAVNGQSVLGASFDLAMGALAAADGREVGLTFFRGTREELQEATVGSTGPSTITLTVREKGEGPEKIITAPAGANLRDVLIANNINVYQSITRWTNCKGKQLCGTCIVNVAEGFDNTSRRGIDEASTLRDNPPTYRLSCVTNMHGDLTVETYPEIGAYQWTR 291
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A835Z6S1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S1_9STRA) HSP 1 Score: 253 bits (646), Expect = 4.490e-76 Identity = 119/212 (56.13%), Postives = 153/212 (72.17%), Query Frame = 1
Query: 322 DPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQNLVGAPFDAAMDALIALDGPDVEFALFRGTTDELKELAGAT--APPAEITVTVKQDGKPDVALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
DPR++ I+RATGI+WGTD+SF WVY+RAL P+G+AA G +S GDQL++ N ++ VGAPFD M G DV+ A FRGTT EL+ LAG A +TV+Q GK D+ + +GANLRD L NG+NVYQS+TRWTNCKG+QLCGTCIV++ + TI+S+DE +TLR NP +YRLSCVTN+Y D+TV +FPP+ QWTR
Sbjct: 81 DPRLHTATISRATGIDWGTDLSFRWVYVRALEPNGSAARTGLVSKGDQLVSFNGESCVGAPFDFVMSLFSKATGTDVDLAFFRGTTAELRALAGGGDGADAERARITVQQPGKADLVIECAAGANLRDVLVGNGVNVYQSLTRWTNCKGRQLCGTCIVDVAGASDACTIKSVDERSTLRSNPPSYRLSCVTNVYKDITVQIFPPIGRDQWTR 292
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A7S2XYE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYE9_9STRA) HSP 1 Score: 248 bits (634), Expect = 4.550e-74 Identity = 114/215 (53.02%), Postives = 157/215 (73.02%), Query Frame = 1
Query: 322 DPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQNLVGAPFDAAMDALIALDGPDVEFALFRGTTDELKELAGATA-----PPAEITVTVKQDGKPDVALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
DPR+Y+V + R+TGI + +D+SF WVY+R L P+GAA G + GDQ++A+N++N +GA F+ +D + + GP++ F +FRG+TDELK+L PP +TV++ +PD+ L AP G N+RD + EN INVYQS+TRWTNC GKQLCGTCIVE+ EGL T++S+DE+T LRENP +YRLSCVT++Y D TV +FP V A+QWTR
Sbjct: 95 DPRLYDVTVPRSTGILFASDLSFKWVYVRDLIPNGAAMRTGLVKKGDQVVAINEENALGASFNYVIDLISQVKGPEITFTMFRGSTDELKDLVEKNGGVVEKPPTTAKITVQRKDQPDLELEAPIGKNIRDLMIENKINVYQSLTRWTNCNGKQLCGTCIVEVTEGLNNLTLKSVDEATVLRENPPSYRLSCVTDIYGDATVKIFPAVGAAQWTR 309
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A7S3TKK5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKK5_9SPIT) HSP 1 Score: 230 bits (586), Expect = 6.550e-68 Identity = 107/210 (50.95%), Postives = 148/210 (70.48%), Query Frame = 1
Query: 322 DPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQNLVGAPFDAAMDALIALDGPDVEFALFRGTTDELKELAGATAPPAEITVTVKQDGKPDVALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
DPR+ +V + + TGI++G D+S W Y+ +L P GAA ++ VGDQL+A+ ++++G P +AM+ + A +G +VE FRG+ + L+ L PA IT+T+++ +PD P G NLRD L GINVYQSVTRWTNC GKQLCGTCIV++ EG+EG T RSLDE++TLRENP Y+L+C+TN+Y DVTV + P V A+QWTR
Sbjct: 33 DPRLLSVSLDKVTGIDFGCDLSLCWPYVLSLTPGGAAERQAEVKVGDQLLAIEGESVIGQPVASAMERIAAAEGKEVEMLFFRGSREALQALCAVEQGPATITLTLQRKDQPDEKFQLPYGCNLRDELISRGINVYQSVTRWTNCNGKQLCGTCIVDVVEGIEGCTRRSLDEASTLRENPETYKLACITNLYGDVTVKLMPKVGAAQWTR 242
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A1Z5KR35_FISSO (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR35_FISSO) HSP 1 Score: 231 bits (590), Expect = 1.050e-67 Identity = 121/227 (53.30%), Postives = 155/227 (68.28%), Query Frame = 1
Query: 316 SIDPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQN-----LVGAPFDAAMDALIALDGP--DVEFALFRGTTDELKELAG----ATAPPAEITVTVKQD-GKPD---VALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
S+DPR+Y VR++RA GI+WGTD+SFS+VY+R + P G AA G++ GDQL + L+GAPFD M+ + LD +++F FRGT ELK + +ITVTV Q+ G + V LTA G N+R+ L +NGINVYQSVTRWTNCKGKQLCGTCIV I +G GT +S+DE++TLRENP +YRLSCVT YDD+TV FPP+ A+QWTR
Sbjct: 74 SLDPRLYKVRLSRAPGIDWGTDLSFSFVYVRDMDPAGDAAFSGEVQKGDQLCELTPVGGVPIPLIGAPFDLVMNTFVELDKSVREIDFVFFRGTKQELKAICANGNSIQGESEQITVTVIQNKGSQEEAVVTLTAKPGVNVRELLVDNGINVYQSVTRWTNCKGKQLCGTCIVNITKGSLGTNRKSMDEASTLRENPDSYRLSCVTFAYDDITVETFPPIKAAQWTR 300
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: K0RAN8_THAOC (2Fe-2S ferredoxin-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAN8_THAOC) HSP 1 Score: 229 bits (585), Expect = 2.040e-67 Identity = 125/227 (55.07%), Postives = 154/227 (67.84%), Query Frame = 1
Query: 316 SIDPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVND-------QNLVGAPFDAAMDALIALDGP--DVEFALFRGTTDELKELAG--ATAPPAEITVTVKQD-GKPDVA---LTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
S D R+ VRI+RATGIEWGTD+SFS+VY+R + P G+A+ G+I VGDQL + NL+GAPFD M+A LD ++ FRGT DELK+ + A P IT+TV Q+ G D + A +GAN+R L +NGINVYQSVTRWTNCKGKQLCGTCIV + EG T +S+DES+TLRENP +YRLSCVT Y DVTV FPP+ A+QWTR
Sbjct: 41 STDTRLRRVRISRATGIEWGTDLSFSFVYVRDMDPAGSASISGEIEVGDQLCELRPVAEGGEATNLIGAPFDQVMNAFAGLDRKVTTLDLVFFRGTKDELKDACSGDSNAEPEIITITVVQNKGAKDETTRYIQAMAGANVRQTLVDNGINVYQSVTRWTNCKGKQLCGTCIVNVKEGGADTNRKSIDESSTLRENPESYRLSCVTFAYGDVTVETFPPIKAAQWTR 267
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A7R9ZQ23_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQ23_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.260e-66 Identity = 123/233 (52.79%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 316 SIDPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAV------NDQN-----LVGAPFDAAMDALIALDG--PDVEFALFRGTTDELKELA----GATAPPAEITVTVKQD-GKPD---VALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
S+D R+Y VR+ R GI+WGTD+SFS+VY+R + P GAA+ G + GDQL + D+ ++GAPFD M + LD ++F FRGT DELKE G T P I VTV Q+ G D V LTAP+G N+R L +NGINVYQSVTRWTNCKGKQLCGTCIV I EG GT +S+DE +TLRENP YR+SCVT Y D+TV FPP+ +QWTR
Sbjct: 61 SLDDRLYRVRLDRFPGIDWGTDLSFSFVYVRGMEPAGAASLSGLVDKGDQLCEIIPVPTREDETVPVIGMIGAPFDFVMSSFAELDRRVQAIDFVFFRGTKDELKEACAGDGGVTKDPETIAVTVVQNKGAKDERTVQLTAPAGVNVRQLLVDNGINVYQSVTRWTNCKGKQLCGTCIVNIAEGANGTNRKSMDEESTLRENPEGYRISCVTFAYGDITVETFPPINPAQWTR 293
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: B8C497_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C497_THAPS) HSP 1 Score: 229 bits (583), Expect = 1.920e-66 Identity = 127/229 (55.46%), Postives = 154/229 (67.25%), Query Frame = 1
Query: 322 DPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLI---AVNDQ-------NLVGAPFDAAMDALIAL--DGPDVEFALFRGTTDELKELAGATAPPAE---ITVTVKQD-GKPDVALT---APSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
DPR+ +R+ RATGIEWGTD+SFS+VY+R L P GAA+ G++ +GDQ+ AV+D NL+GAPFD M+A +L D DV+ FRGT DELK + E IT+TV Q+ G D L A +G NLR LT+NGINVYQS TRWTNCKGKQLCGTCIV I G T +SLDE++TLRENP +YRLSCVT Y D+TV FPP+ ASQWTR
Sbjct: 90 DPRLRRLRLPRATGIEWGTDLSFSFVYVRDLEPSGAASLSGEVEIGDQICELRAVSDSTGVGEVINLIGAPFDKVMEAFASLKKDVRDVDLVFFRGTKDELKAACAGGSFSEENEKITITVIQNKGSNDEELRTIEAKAGCNLRQVLTDNGINVYQSFTRWTNCKGKQLCGTCIVNIANGSGDTNRKSLDEASTLRENPESYRLSCVTFAYGDITVETFPPIEASQWTR 318
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Match: A0A7S3L3K5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3K5_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.180e-66 Identity = 126/226 (55.75%), Postives = 149/226 (65.93%), Query Frame = 1
Query: 322 DPRIYNVRIARATGIEWGTDISFSWVYIRALHPDGAAANCGQISVGDQLIAVNDQ-------NLVGAPFDAAMDALIALDGP--DVEFALFRGTTDELKELAGATAPPAE---ITVTV---KQDGKPDV-ALTAPSGANLRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVEINEGLEGTTIRSLDESTTLRENPANYRLSCVTNMYDDVTVTVFPPVLASQWTR 951
D R+Y +RI+RATGIEWGTD+SFS+V +R + P GAAA G I+VGDQL + NLVGAPFD M+A LD DV+ FRGT DELK A A +E ITVTV K K V L AP+G N+R+ +NGINVYQSVTRWTNCKGKQLCGTCIV + +G T +S+DE +TLRENP YRLSCV Y D T+ FPP+ ASQWTR
Sbjct: 86 DERLYRIRISRATGIEWGTDLSFSFVNVRGMDPTGAAAMSGAINVGDQLCELKASKEDSTPVNLVGAPFDFVMEAFADLDKTVSDVDLVFFRGTKDELKAAAKGEATSSEPEIITVTVIENKGSRKEKVHTLKAPAGVNIRELCVDNGINVYQSVTRWTNCKGKQLCGTCIVNVTDGGINTNRKSMDEGSTLRENPETYRLSCVAFAYGDCTIETFPPIEASQWTR 311 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2088.1 >prot_P-fluviatile_contig14.2088.1 ID=prot_P-fluviatile_contig14.2088.1|Name=mRNA_P-fluviatile_contig14.2088.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=296bp MGHVCCRSNSARGIPDTSRSLPGWRRGRSAGGSHMPVSSLGAAKDWLKGGback to top mRNA from alignment at P-fluviatile_contig14:849776..858287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2088.1 ID=mRNA_P-fluviatile_contig14.2088.1|Name=mRNA_P-fluviatile_contig14.2088.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8512bp|location=Sequence derived from alignment at P-fluviatile_contig14:849776..858287+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:849776..858287+ >mRNA_P-fluviatile_contig14.2088.1 ID=mRNA_P-fluviatile_contig14.2088.1|Name=mRNA_P-fluviatile_contig14.2088.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1776bp|location=Sequence derived from alignment at P-fluviatile_contig14:849776..858287+ (Porterinema fluviatile SAG_2381)back to top |