mRNA_P-fluviatile_contig14.2087.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2087.1 vs. uniprot
Match: D7FNF4_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF4_ECTSI) HSP 1 Score: 848 bits (2191), Expect = 6.550e-295 Identity = 524/931 (56.28%), Postives = 601/931 (64.55%), Query Frame = 1
Query: 37 IAGAVSFALVLLEGVSHVDSAK--FGGPPPVAKKQVKVSFDDASLSFWDPFKYTGFNLTAAVLPVAEELGRRGPGYVAYAAVSTGLGLFLPPKALTAVNVVYVAGAVARSRDSSSGGGGVESFCRDEGRLLLGMPSLHLAAVGSALRIVRFRLWRRLFVRATLFRLRYQLRFMRLYRPRWMTRGTSPLALIVQDTAHAARSVQGLLPDLCHQAAFVAVGCDVPYWSDCSPPPRIEKGWGALRRLDRLLKREFGAAATRVRSRDTPAPTPGLPEWRTSHRIILGTAGALTQSGGAVDCSRVAEPPNNHFVLRRSGEVRGGQAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLEEYAAVLYSATGEEEIAKTKE-IATGSRQPGQAPRAAADA--PERGPLVRFHNVTTVASRGSTLAKSYRALAELPYGDGRGAPGGAAPSSSLYSGPKTITAGEASGPA------ETDDEIRGEAASPPP---LPPLVRRXXXLQPVVIKRTVPRQLLLAEDDIAAARRVLRRLVFNAEIDLDLSGVLAEVAAAVARAGDLRSEAESIEKVRSNLARAGMLGSAVGVPEVVSCPELGPLARENVLVTTALRGVDVSDTYVMQHAAPRGERERIRFVDVVFKAFAHMCLTDGCFPSNPMPENLLYMYSGQVGLTDLSSVSELDEAERLALCRLYRALAELKGVDASNPSEAAELKARAAMEGVGLVIDLPPAGGIPRTSCAGWTAEEAAALSLASVAERAIDEAFGDTSSSSLPS------------------------------STSADSPDDGKDKADSNGDDRDGDDEALSVTKSPQPPLPXXXXXXXXXXTRPPLTYVMILRGLFDTQRGEALALLGDGGGELLRGMAVRRLPRAMAPVLRMVANLRGICAHLDVDKSILPRFSRAASKGLSWR 2697
+A A S ALVLL HVD++K FG P KK+VKVSFDD S SFWDPFK GFNLT AV P+AEE+GRR PGY AYAA ST LGLFLPPK +TAVNV YVA AVARS + GGVE+FCRDEGRLLLGMPSLHLAA G+ALR RFR WRRLFVRATLFRLRYQLRFMR+YRPRW+ RG SPL LIVQDTA AARSVQGL+PDLC QAAF+A GC + YWS+C+PPPR+EKGW LRR+DR L+RE G A R R P GL WR HR++LGT + +S A RR + G+A R EEY+ VLY G ++ + G+R+ G A P GPLVRFHNVTT+ASRGSTL +SYRALAELPYGDG+ P G + S + + AG G A + D+E+ S P + R+ LQPVVIKR V RQL+LAEDD+AAAR+VLRRL F AEIDLD+SGVLA VAAAV+RA DLR+EA SIEKVRSNL +AGMLGS VGVPEV+SCPELG LAR+ +LVTTALRGVDVSD+YVMQHAAP GE+ER RF+D VF+AF MCL DGCFPSNP+PENLLYMYSGQVGLTDLSSV++L E++R ALCRLY LA+L+ DA NPSEAAELKARAAME VGLVIDLPPAG A++ D+GK+ XXXXXXXXXX PLTYVM+LRGLFDT+R EALAL+G GG ELL+GMAVRRLP+AM PVL+MVANLRG+CAHLDVD+SILPRFS+AASKGLSWR
Sbjct: 5 LAHAASLALVLLAKACHVDASKWKFGAQAPATKKRVKVSFDDESFSFWDPFKNKGFNLTRAVGPIAEEVGRRAPGYAAYAAASTALGLFLPPKVMTAVNVAYVAAAVARSHE-----GGVETFCRDEGRLLLGMPSLHLAAAGTALRAARFRFWRRLFVRATLFRLRYQLRFMRIYRPRWVIRGGSPLGLIVQDTADAARSVQGLVPDLCRQAAFIAGGCRLAYWSECNPPPRVEKGWFVLRRVDRRLRRELGPRAQRAR----PVGV-GLLGWRIPHRVVLGTLRFVFRSPAA----------------RRENKRISGRAPRLVGAEGHEQGDGSGGGVVVEEVG---------EEYSTVLYGDAGALAAGSDRDGVEDGTRRRGGRKEALMPEGIPAEGPLVRFHNVTTIASRGSTLTRSYRALAELPYGDGQVDPEGDSFSLWYAKLQRGVPAGGGWGSAGDGGDRDEDEEVLARMESTPTPSAVAAAARKAATLQPVVIKRNVRRQLMLAEDDLAAARKVLRRLTFRAEIDLDMSGVLAAVAAAVSRAADLRTEARSIEKVRSNLFKAGMLGSVVGVPEVLSCPELGALARKGILVTTALRGVDVSDSYVMQHAAPGGEKERGRFLDGVFRAFGQMCLADGCFPSNPLPENLLYMYSGQVGLTDLSSVTQLAESQRRALCRLYHTLADLRREDAVNPSEAAELKARAAMESVGLVIDLPPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHWEVGAEA-DEGKEXX------------------XXXXXXXXXXXXXXXXXXSAPLTYVMLLRGLFDTRRDEALALVGGGGMELLKGMAVRRLPQAMVPVLKMVANLRGLCAHLDVDESILPRFSQAASKGLSWR 881
BLAST of mRNA_P-fluviatile_contig14.2087.1 vs. uniprot
Match: A0A835ZDP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP2_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.820e-9 Identity = 116/445 (26.07%), Postives = 155/445 (34.83%), Query Frame = 1
Query: 1495 VVIKRTVPRQLLLAEDDIAAAR---RVLRRLVFNAEIDLDLSGVLAEVAAAVARAGDLRSEAESIEKVRSNLARAGMLGSAVGVPEVVSCPELG------------------------PLARENVLVTTALRGVDVSDTYVMQHAAPRGERERIRFVDVVFKAFAHMCLTDGCFPSNPMPENLLYMYSGQVGLTDLS-SVSELDEAERLALCRLYRALAELKGVDASNPSEAAEL--------KARAAMEGVGLVIDLPPAGGIPRTSCAGWTAEEAAALSLASVAERAIDEAFGDTSSSSLPSSTSADSPDDGKDKADSNGDDRDGDDEALSVTKSPQPPLPXXXXXXXXXXTRPPLTYVMILRGLFDTQRGEALALLGDGGGE------------LLRGMAVRRLPRAMAPVLRMVANLRGICAHLDVDKSILPRFSRAASKG 2685
V+IKR + A DD+ A R R RR + +A + + V + DL EA+++ +RS+LA G+LGSA +P VV E+G A +VLVTTA RGV +D + HAA G + AH+ L DG + P P LL G VG D + L R ALCRLY AL K +AR +E G+ +D+ A R W D AL++ +P P LP F G GDGGG L G + +P +AP LRMVA LRG+CA + D S+LP F+ AA +G
Sbjct: 462 VLIKRADAARRRYANDDVRALRGALRAARRALGSAAA----AAFEEDARRRVEASADLTQEADALRAMRSSLAEVGLLGSAE-LPVVV---EVGGGSXXXXXXXXXXXXXXXXXXXXXXXAARSVLVTTAPRGVSAADPIMFVHAAG-GRGAAAVWARRAAALHAHLALADGLCLAAPHPAALLLARGGTVGFVDPARDARALPPPLRQALCRLYEALGARKADGXXXXXXXXXXXXXXXXXERARELLEACGVEVDMARA----RPGATLW--------------------------------------------------------DVALALFDAP-PVLPRAAAAAANAQ--------QYRISAFGRCSG------GDGGGXXXXXXXXXXXGAFLYGATLVSVPPELAPFLRMVAGLRGVCARVGADASLLPAFAEAAQRG 822 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2087.1 >prot_P-fluviatile_contig14.2087.1 ID=prot_P-fluviatile_contig14.2087.1|Name=mRNA_P-fluviatile_contig14.2087.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=907bp MHTNARGFMPSLIAGAVSFALVLLEGVSHVDSAKFGGPPPVAKKQVKVSFback to top mRNA from alignment at P-fluviatile_contig14:843546..849570- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2087.1 ID=mRNA_P-fluviatile_contig14.2087.1|Name=mRNA_P-fluviatile_contig14.2087.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6025bp|location=Sequence derived from alignment at P-fluviatile_contig14:843546..849570- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:843546..849570- >mRNA_P-fluviatile_contig14.2087.1 ID=mRNA_P-fluviatile_contig14.2087.1|Name=mRNA_P-fluviatile_contig14.2087.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5442bp|location=Sequence derived from alignment at P-fluviatile_contig14:843546..849570- (Porterinema fluviatile SAG_2381)back to top |