mRNA_P-fluviatile_contig14.2083.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: D7FNF2_ECTSI (Similar to photosystem II oxygen evolving complex protein PsbP in Synechococcus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF2_ECTSI) HSP 1 Score: 288 bits (738), Expect = 7.200e-92 Identity = 150/178 (84.27%), Postives = 161/178 (90.45%), Query Frame = 1
Query: 1 GAPAPARAGLEEQHQGGEEGVGSFEEYASPDGSFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRVPA 534
GAPA ARA E+ H+ ++ G+ EEYASPDGSFALRYP FKGFSKPLKTHKVEVNF+SEEVKGYEVGVAIDPVRIESLE FG+PEEVGARVLKVEQAKDGTLDTKL + AEKQG L+LYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQV+A+LKRVVESFRV A
Sbjct: 100 GAPAAARA--EQGHKEQQDKEGALEEYASPDGSFALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGDLSLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKRVVESFRVLA 275
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A6H5JQE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE7_9PHAE) HSP 1 Score: 290 bits (743), Expect = 2.280e-83 Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 1
Query: 1 GAPAPARAGLEEQHQGGEEGVGSFEEYASPDGSFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRVPA 534
GAPA ARA +Q Q +EG FEEYASPDGSFALRYP FKGFSKPLKTHKVEVNF+SEEVKGYEVGVAIDPVRIESLE FG+PEEVGARVLKVEQAKDGTLDTKL + AEKQG L+LYTLDYFVE+TRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQV+A+LK +VESFRVPA
Sbjct: 1965 GAPAAARAEHGQQQQQDKEGA--FEEYASPDGSFALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGDLSLYTLDYFVENTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKHIVESFRVPA 2140
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A836CB55_9STRA (PsbP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB55_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.500e-43 Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 79 YASPDGSFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRVPA 534
Y + DGSF+ RYP FK +SK LKTHK EVN++S +GYE+GVA+DPVRI SL++FGS +EVG +V+ VE KDG L+ KL +E+ G + YT++Y+VE+T FVAKV IKD L+ CT + K KD+ + L+ V SF V A
Sbjct: 6 YTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A7S2WW61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW61_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.220e-32 Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 1
Query: 76 EYASPDGSFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEA-RAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRV 528
E + DG++ YPA F SKPLKTH VEVN +SE V+GY G+A+DP++I SLE FG P VG RV+ VE+ KDG L L A RA+ + Y LDY ESTRG F++++ I++ L+ T Q K+ D+ V+A+ + + +SF +
Sbjct: 75 ELRAEDGTYEFSYPAGFAVTSKPLKTHLVEVNVKSEAVRGYSAGLAVDPIKIPSLEAFGDPTTVGNRVVGVERRKDGVLSADLVGAERAQDARGIVYYDLDYVAESTRGNNRFLSRIAIREGKLHVFTVQTKQADFGSVEAEARDMAQSFHL 226
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A0G4EN49_VITBC (PsbP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EN49_VITBC) HSP 1 Score: 125 bits (313), Expect = 8.950e-31 Identity = 56/123 (45.53%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 163 EVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRVP 531
E+N++S E+KGY VGVA+DPV+I+SL FG+P+ VG R++ VE+ KDG +D +L +A + + G Y ++Y ++TRGF HF+ +V + + L+A TAQ+K+KD+ +V+ Q+K +V +F VP
Sbjct: 6 EINYKSPEIKGYTVGVAVDPVKIDSLAAFGTPDFVGQRIVDVEKKKDGVIDVQLLKAESLESGGQVFYEVEYTSDTTRGFNHFITRVIVVNQRLFAFTAQSKQKDFDKVRDQMKAIVSTFVVP 128
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A7S0QHT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHT9_9CRYP) HSP 1 Score: 120 bits (301), Expect = 1.520e-28 Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 79 YASPDGSFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRV 528
Y S F++ YPA+++ KP+KTH EVN S+ KG E+GV++DPV+I+++ FG+P +VG RV+ +E++KDG L KL E + + YT++Y ESTRG + F+AKV I L+ TAQAK + +A L+ + SF V
Sbjct: 24 YRSDKEGFSVDYPAAWRASQKPVKTHLEEVNLLSDTSKGTELGVSVDPVKIDTVTAFGTPLQVGKRVVALERSKDGVLSAKLIAVGQEDRDGVPYYTIEYASESTRGNRRFLAKVAIVRRRLFVLTAQAKTDSFAADEAALRAGLASFAV 173
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A7R9WT23_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT23_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.840e-27 Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 97 SFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLF-EARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRV 528
++A R P F KPL+TH EVNF S+ KGY+ G+ +DPVRIESL++FG+PEEV ARV+ E +DG + L + A G+ Y L+Y + RG KHFV K+ + LY TAQAKE D+ V+ +L + +F V
Sbjct: 149 AYAFRPPTDFSNTKKPLQTHLEEVNFVSDTTKGYQYGITVDPVRIESLKQFGTPEEVAARVVTAEVNRDGVFEVTLVSDPIASDDGS---YVLEYLSDGKRGKKHFVTKIFVSKKKLYVLTAQAKEVDFASVKEELFGTLTTFAV 290
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A7S0LET4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LET4_9EUKA) HSP 1 Score: 117 bits (293), Expect = 6.390e-27 Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 100 FALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQ----VQAQLKRVVESFRV 528
++L YP+ + KP+KTH E S KG +GV +DPV+I+SLE FG+PEEV RVL VE+ +DG LD +L A+ G + YT++YFVESTRG K ++ K I LY QAK DY VQ QL+ +V SFRV
Sbjct: 69 YSLSYPSGWNPTQKPVKTHLSEALLNSPR-KGVSLGVTVDPVKIDSLEAFGTPEEVADRVLAVEEGRDGVLDVQLRSLAADA-GKPSYYTIEYFVESTRGKKVYLCKYCIAQKRLYVLQTQAKVVDYDSAASDVQQQLRAIVASFRV 213
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: K0RL95_THAOC (PsbP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RL95_THAOC) HSP 1 Score: 119 bits (297), Expect = 7.130e-27 Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 1
Query: 91 DGSFALRY----PASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQ-LKRVVESFR 525
DG F Y PASF +KPLKTH E+NF S +V+GY+VGV +DPVRI+S+++FG PE+V ARV+ E +DG D KL + AE L Y ++Y + RG K FV ++ +K+ LY T Q+KE +Y + Q + V+SF+
Sbjct: 127 DGKFQFAYTVTPPASFTSSNKPLKTHLDEINF-SGDVRGYQVGVTVDPVRIKSIKEFGDPEQVAARVVTAEVNRDGVFDVKLVKDAAE-DAQLGCYDVEYISDGKRGTKRFVTRIYVKEGFLYVLTFQSKEAEYDGAREQEVLNTVKSFK 274
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Match: A0A1Z5KGA8_FISSO (PsbP domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGA8_FISSO) HSP 1 Score: 113 bits (283), Expect = 1.850e-25 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 97 SFALRYPASFKGFSKPLKTHKVEVNFRSEEVKGYEVGVAIDPVRIESLEKFGSPEEVGARVLKVEQAKDGTLDTKLFEARAEKQGTLTLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVQAQLKRVVESFRV 528
S+ P + +KPLKTH EVNF+S + YE G+ +DPVRI+SL +FG+P EV A+V+ E +DG D L E Y L+Y + RG K F+ K ++D +L+A TAQ + DY ++Q+++ + V+SFR+
Sbjct: 79 SYVFEPPTDWAPQNKPLKTHLDEVNFKSPSISKYEYGITVDPVRIKSLHEFGTPAEVAAKVVLSELNRDGVFDVTLAEDAFAADND-AYYQLNYISKGKRGEKRFITKFYVRDQMLFALTAQCLDSDYRKLQSEITKTVDSFRI 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2083.1 >prot_P-fluviatile_contig14.2083.1 ID=prot_P-fluviatile_contig14.2083.1|Name=mRNA_P-fluviatile_contig14.2083.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=179bp GAPAPARAGLEEQHQGGEEGVGSFEEYASPDGSFALRYPASFKGFSKPLKback to top mRNA from alignment at P-fluviatile_contig14:830830..833799- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2083.1 ID=mRNA_P-fluviatile_contig14.2083.1|Name=mRNA_P-fluviatile_contig14.2083.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2970bp|location=Sequence derived from alignment at P-fluviatile_contig14:830830..833799- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:830830..833799- >mRNA_P-fluviatile_contig14.2083.1 ID=mRNA_P-fluviatile_contig14.2083.1|Name=mRNA_P-fluviatile_contig14.2083.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1074bp|location=Sequence derived from alignment at P-fluviatile_contig14:830830..833799- (Porterinema fluviatile SAG_2381)back to top |