prot_P-fluviatile_contig14.1992.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.1992.1
Unique Nameprot_P-fluviatile_contig14.1992.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length581
Homology
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 625 bits (1611), Expect = 8.220e-218
Identity = 342/506 (67.59%), Postives = 396/506 (78.26%), Query Frame = 0
Query:   89 ILSFGSTSADNLASLQHLTQEGDGGEQGEEDIDGGSFWSREKYVASEPRAVTGAKAAGAAPVAPEQQPRSSNDIYSAPVVSTTVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSN-MAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNILRVSGTPEQREAFEQLQELRQ-WGDEAASVGGRGAPRLAGGGKGG-------------RKKPGNRSKGAKAAFDAVQKANIFVQ 579
            +   G  +    +SLQ LTQ G    + +ED D G+F+S E+ +     A   A+AA A P A E       D  +  VVST VSDED+ APIDWVLSRRLP++SRRFYRKALEAGDVKVDGRKV+RFIRVKRGARISVD+  Q                       SLVFPQ LP LRVV+ED+HLF VMKPAGM+CQPCAAAP+GTVLHG+M+HMV+SG+++EG++ MAAAA+ LSQGIVQRLDKQTSGIM+VAKTLAASSKLS+LF+KGKV KQYLA+CHGDPGFDS+VDAPLYRRSSGK+GAV PWEA +F+AKEAQTRVRNVATA G+SLCRADILTGRMHQVRVHLKWIGCPIVGD+EYGD EAN RV++RSA R + QRPLLHS+SLEF HPFT KPMSF+APMP DMWE AQNILR+SGTPEQ+EAF +LQELRQ   DEAA VGGRGAPR+A GG+GG             +K+PGNRSKGA+AAF+AV K+ IF Q
Sbjct:   66 VAGLGGAADGVESSLQRLTQPG----EDDEDEDKGAFFSAEESLPPT-SAPAPARAAPARPAATE-------DGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQSQADEAAPVGGRGAPRMAAGGRGGGXXXXXXXXXGGGKKRPGNRSKGARAAFEAVAKSEIFEQ 559          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.240e-71
Identity = 156/382 (40.84%), Postives = 207/382 (54.19%), Query Frame = 0
Query:  171 TVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHG------------DPGFDSI----VDAPLYRRSSGKMGAVNPWE----------AADFKAKEAQTRVRNVATAA-------------GMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEY---GDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNIL 510
            TV  ED NAPIDW+LSR+LP  SRRF+RK L  G+V++DGR  +R +RV+                 PG  ++    +  A +P S   P     L VVYEDEH+  V KP G+V QP A+ P+GT+L+G++ HMV  GE   G  +AA    L QG+V RLD+ TSGI+IVAK L ASS LS++FK  KV+K YLA+  G            D G D      +DAPLY+R+SGKM    P +          A+    K A TRV+ +  +A             G+   + +I TGR HQ+R HL   G P++GD  Y   GD  A    AR +A+ L   RPLLH+LSL   HP T   +   AP+PADMW    +++
Sbjct:    9 TVEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVR-----------------PGQTITVAAAAADAVAPPSEQLPAQDLKLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQG--LLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 209 bits (533), Expect = 1.660e-58
Identity = 121/347 (34.87%), Postives = 197/347 (56.77%), Query Frame = 0
Query:  168 VSTTVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSGKMGAVNPWE----AADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNIL 510
            VS  V  E++ AP+DW L+   P+ SRR++RK ++ G+VKV+G+ VRRF +++ G  + +++                D +       +L        L V++ED+ L AV+KPAG+VC P  +   GTVL+G++ H + +    E    A +   LS+GIV RLDK TSG+MI AK   A+ KLS  F+  +  K+YL +C+G     ++V+ P+YR  +GKM  ++  +     ++ + K++++ V+ +    G+SL   +++TGRMHQ R+HLK++G PI+GD  YG      RV + +   L   R LLH+  L   HP T + +   AP+P+DMW   ++ +
Sbjct:   58 VSAEVDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIE---------------DFAKEIEGAENLS-------LSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLET----EQQVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYG----LARVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMWGVIEDCI 374          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.530e-52
Identity = 142/417 (34.05%), Postives = 203/417 (48.68%), Query Frame = 0
Query:  161 DIYSAPVVSTTVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEI------------------EEGSNM-------------------------AAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGD--PGFDSIVDAPLYRRSSGKMG----AVNPW------------------EAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHL-KWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNI 509
            D + + V +  V  +DD+ P+D VL+R+ PE SRRF+RK ++AG VKVD ++V+R  ++++G  +S   +                     P     + P+ L L  V++EDEHL AV KP GM+  P  +   GTVLHG++  +    E                   EE + +                         A   + L+QG+V RLD  TSG+++VAK   A+  ++  F++  V K+Y+A+  GD  PG   +   PL R SSGKM     A   W                  EA    A+ A T VR +AT   +S+  A+ILTGRMHQ+RVHL +   CP++GD  YGD + N+R  R  +  L   R LLH+ SLEFTHP T K +S   P+P DM    Q I
Sbjct:   46 DSHQSDVQTFVVGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVSAQFK---------------------PDEKPSMEPEDLGL-EVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKR--SENLQVSRTLLHAHSLEFTHPITGKHVSLSTPVPLDMKRIVQRI 437          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 186 bits (472), Expect = 1.620e-49
Identity = 117/333 (35.14%), Postives = 173/333 (51.95%), Query Frame = 0
Query:  172 VSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYR--RSSGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADM 502
            V +E +   +D  LS   PE SR ++    + G V+V GR V++  +++ G  +SV                        P+      P+ +PL  ++YEDEHL AV KP GMV  P   +  GT  + + FHM   GE       A     L  GIV RLDK TSG+++ +K     +KLS +F   K+ K YLA+C G+PG D  ++  + R  ++  KM  ++  +    +A+ A T V  ++  + +SL R  I TGR HQ+RVHL     P++GD+ YG+ + N    RR+  R   QRPLLH+  LE  HP T +P+S +AP+P DM
Sbjct:   71 VGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAF---------------------LPTAEMAAEPEDIPL-DILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGE---DYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQN----RRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A486XP91_9BACT (Pseudouridine synthase n=3 Tax=Chlamydiae TaxID=204428 RepID=A0A486XP91_9BACT)

HSP 1 Score: 172 bits (437), Expect = 1.400e-45
Identity = 113/339 (33.33%), Postives = 181/339 (53.39%), Query Frame = 0
Query:  171 TVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNI 509
            T S E+ +  +D +LS R P+ SR +++  ++ G V V+G+ V++  R K G  I +  ++                     +P   + P+ + L  ++YEDEHL  + KPAGMV  P     +GT ++ ++FH  +    +           L  GIV RLDK TSGI+I AKT AA + L  LF K K+ K YLAIC G P  + ++DAP+ R  S +            + + ++T  + +A  + +S  + ++LTGR HQ+RVHLK IG PI+GD+ YG+   N++ + +        R LLH+  ++F HP T++ +S  AP+P D+ EA + +
Sbjct:    9 TSSLEESHLRLDALLSLRFPDKSRSYFQFLIKQGYVLVNGKAVKKRERAKPGDEIEIYFQI---------------------TPEIDLTPESIDL-EILYEDEHLIVINKPAGMVVHPAPGHYRGTFVNALLFHCKQIDSDDP----------LRPGIVHRLDKDTSGILIAAKTRAAHTGLIDLFAKRKIEKTYLAICIGTPR-EGLIDAPIARHLSRRKEMT-----ICMQGRASKTICQVLAQNSSLSFVKLELLTGRTHQLRVHLKHIGTPILGDETYGNSTINKKFSTK--------RQLLHAYFIKFFHPITQQILSLTAPIPEDLREAIELV 301          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 4.400e-45
Identity = 114/351 (32.48%), Postives = 186/351 (52.99%), Query Frame = 0
Query:  171 TVSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASR----------LSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYR--RSSGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNI 509
            TV + +    +D  L  R+PE SR ++    + G V V G+  ++ ++V+ G  + V   +                     SP   +  + +PL  ++YED+ + AV KPAGMV  P   +  GT ++ ++FH+ +SG    G  +A AA +          L  GIV RLDK T+G+++ AK     +KL+ LF + +++K YLA+C G+PG  + +D P+ R  R   +M AV P    + +++ A + V  VA    +S+    I TGR HQ+RVHL+    P++GD+ YG+ + N+R+ + +       RPLLH+ SLEF HP T + +S  AP+P+D+    + I
Sbjct:  107 TVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFII---------------------SPELSLQGEDIPL-DILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAV-PTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTG----LTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT)

HSP 1 Score: 169 bits (428), Expect = 2.200e-44
Identity = 112/340 (32.94%), Postives = 177/340 (52.06%), Query Frame = 0
Query:  172 VSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNILR 511
            V++E++   +D +L+ R PE SR ++++ ++   V V+G++V++ I ++    I +   L                     SP   + P+ +PL  ++YEDE L  + KPAG+V  P A    GT+++G++FH               AA  L  GIV RLDK TSG+++ AK   A  KLS+LF   +V+K+YLAIC  +PG + ++D P+ R    +       E    + +EAQT   ++     +SL R    TGR HQ+RVHLK I  PI+GD  YG+   N++              LLH+  L F HP + + + F+AP+P DM +   +I+R
Sbjct:    8 VTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFVL---------------------SPEISLEPEEIPL-DILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHC----------KQLKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGRHPVRRKEMTILKE----RGREAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYG--------LTHQLLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A1F8JRD2_9BACT (Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=204428 RepID=A0A1F8JRD2_9BACT)

HSP 1 Score: 165 bits (418), Expect = 6.340e-43
Identity = 112/332 (33.73%), Postives = 168/332 (50.60%), Query Frame = 0
Query:  172 VSDEDDNAPIDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRS-SGKMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADM 502
            ++ ED    +D +L+      SR +++  +EAG V ++G  V++  + + G  +S+ +                      P P   + P+ +  L +++EDEHL A+ KPAGMV  P    P  T ++ ++ H     +           + L  GIV RLDK+TSG+++ AK+ AA  ++ SLF + KV K Y+AIC G+P  D  + APL R     K  AV P        KEA T +R +++    S      LTGR HQ+RVH++ IG PI+GD  YG    N++        L   R LLH+ SL F HPF K+P+   AP+PA M
Sbjct:    9 ITQEDAGRRLDLLLASHYSSYSRSYFQYLMEAGAVLLNGSPVKKRTKPRLGDEVSLSL---------------------IPLPEMRLEPEAI-FLDILFEDEHLIAINKPAGMVVHPAPGHPSHTFVNALLHHCKELPD--------TLGAPLRPGIVHRLDKETSGVLLAAKSQAAHREIVSLFSERKVKKTYVAICLGNPK-DQTIRAPLLRHPVRRKEIAVAP------SGKEAVTSIRVLSSQGNYSFVEIAPLTGRTHQIRVHMRHIGAPILGDPVYGPAFLNKK--------LQLSRQLLHARSLFFIHPFEKRPLEISAPLPAAM 295          
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.100e-42
Identity = 116/335 (34.63%), Postives = 174/335 (51.94%), Query Frame = 0
Query:  181 IDWVLSRRLPENSRRFYRKALEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTAAPSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHGIMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSG--KMGAVNPWEAADFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPADMWEAAQNILRVS 513
            ID  L  ++P+ SR ++      G V V+G        VK+  +++            G ++S    +TA  +    + P+ +PL  V++ED  L A+ KP GMV  P      GT ++ ++ H+ + G +         +  L  G+V RLDK TSG+++ AKT     +LS LF   KV K YLA+C G+PG D  +D P+ R ++   KM AV P      +A+ A + VR  A    +S+    I TGR HQ+RVHL+    PIVGD+ YG+ + N+R+ +R  SR     PLLH+L LEFTHP T   +   AP+P DM    + +  V+
Sbjct:   67 IDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSA-----VKKSHKVTA-----------GQIISVRFLATAELN----LGPEDIPL-DVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS----LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAV-PDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGISR-----PLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVA 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.1992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE8.220e-21867.59S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA1.240e-7140.84Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK1.660e-5834.87Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA3.530e-5234.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXK7_HETAK1.620e-4935.14Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A486XP91_9BACT1.400e-4533.33Pseudouridine synthase n=3 Tax=Chlamydiae TaxID=20... [more]
D8LFM8_ECTSI4.400e-4532.48Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6M1ZVU5_9BACT2.200e-4432.94Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A1F8JRD2_9BACT6.340e-4333.73Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=20... [more]
A0A836CH15_9STRA1.100e-4234.63Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 179..236
e-value: 0.0063
score: 25.7
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 179..238
score: 10.195
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 178..508
e-value: 6.7E-61
score: 204.1
NoneNo IPR availableGENE3D3.30.2350.10coord: 267..512
e-value: 6.7E-59
score: 201.1
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 179..507
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 179..507
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 181..229
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 167..234
e-value: 8.1E-9
score: 36.8
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 274..440
e-value: 3.6E-25
score: 88.9
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 329..343
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 266..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:24326..30299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.1992.1mRNA_P-fluviatile_contig14.1992.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 24326..30299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.1992.1 ID=prot_P-fluviatile_contig14.1992.1|Name=mRNA_P-fluviatile_contig14.1992.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=581bp
KHLKSALHLGYSVEEARTRYMYYSRWSTGALVGTAGCAAAASSIPGCCFL
SAPRCHRAEPFAGPRSAQHHVDSGSTLGPRRRRRHRGGILSFGSTSADNL
ASLQHLTQEGDGGEQGEEDIDGGSFWSREKYVASEPRAVTGAKAAGAAPV
APEQQPRSSNDIYSAPVVSTTVSDEDDNAPIDWVLSRRLPENSRRFYRKA
LEAGDVKVDGRKVRRFIRVKRGARISVDMRLQKTQPSPGGVVSSGDQSTA
APSPSSLVFPQHLPLLRVVYEDEHLFAVMKPAGMVCQPCAAAPKGTVLHG
IMFHMVRSGEIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASS
KLSSLFKKGKVNKQYLAICHGDPGFDSIVDAPLYRRSSGKMGAVNPWEAA
DFKAKEAQTRVRNVATAAGMSLCRADILTGRMHQVRVHLKWIGCPIVGDK
EYGDLEANQRVARRSASRLDAQRPLLHSLSLEFTHPFTKKPMSFRAPMPA
DMWEAAQNILRVSGTPEQREAFEQLQELRQWGDEAASVGGRGAPRLAGGG
KGGRKKPGNRSKGAKAAFDAVQKANIFVQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006225PsdUridine_synth_RluC/D
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf