mRNA_P-fluviatile_contig14.2284.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2284.1
Unique NamemRNA_P-fluviatile_contig14.2284.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2453295..2453807 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size514
Cds size321
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.2392795-CDS-P-fluviatile_contig14:2453294..24536151622815591.2392795-CDS-P-fluviatile_contig14:2453294..2453615Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2453295..2453615 +
1693562368.1320655-CDS-P-fluviatile_contig14:2453294..24536151693562368.1320655-CDS-P-fluviatile_contig14:2453294..2453615Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2453295..2453615 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.2515173-UTR-P-fluviatile_contig14:2453615..24538071622815591.2515173-UTR-P-fluviatile_contig14:2453615..2453807Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2453616..2453807 +
1693562368.141356-UTR-P-fluviatile_contig14:2453615..24538071693562368.141356-UTR-P-fluviatile_contig14:2453615..2453807Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2453616..2453807 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2284.1prot_P-fluviatile_contig14.2284.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2453295..2453615 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2284.1

>prot_P-fluviatile_contig14.2284.1 ID=prot_P-fluviatile_contig14.2284.1|Name=mRNA_P-fluviatile_contig14.2284.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp
VRLLGGESSGALSLKCRLTFGGQGAKPASDRLSRACISQSRPSASGGGWG
SFRSHAVSRRVFLWDDVMRSWVARKTASLAVFSLFFSQEMTISAVLTDPR
AARSEQ*
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mRNA from alignment at P-fluviatile_contig14:2453295..2453807+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2284.1 ID=mRNA_P-fluviatile_contig14.2284.1|Name=mRNA_P-fluviatile_contig14.2284.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=513bp|location=Sequence derived from alignment at P-fluviatile_contig14:2453295..2453807+ (Porterinema fluviatile SAG_2381)
GTACGGCTTCTTGGAGGTGAGTCAAGCGGCGCACTTTCGCTCAAGTGCAG
ATTAACATTCGGAGGGCAGGGGGCAAAACCCGCGTCGGACCGACTCTCTC
GAGCATGTATTTCGCAGTCCAGGCCAAGCGCCTCAGGCGGAGGTTGGGGT
TCGTTCCGTTCACACGCTGTGTCGAGGCGCGTCTTTCTTTGGGACGATGT
AATGCGTTCTTGGGTCGCAAGGAAGACGGCCAGCCTTGCTGTGTTCTCGC
TGTTTTTCTCTCAGGAGATGACGATTTCGGCCGTGTTGACGGATCCCCGG
GCGGCTCGGTCTGAACAGTAGAGTGGTGATTGTCTGATTGGTCACTATAG
CCGGCTACGCCAACCAGTAGCTTCTCGCTGAGGGTCAACTCGCTGGTCGA
CATTGTTGCGTTTGCCACCTTCGGCTTTGCCGACACCGGCCACACACGTC
CTCAATCCGGCGTCGTTTTTTGCTCTGCTTTTTGTGCATGTCATCCCCCG
TCGAACTTGTCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2453295..2453807+

>mRNA_P-fluviatile_contig14.2284.1 ID=mRNA_P-fluviatile_contig14.2284.1|Name=mRNA_P-fluviatile_contig14.2284.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=642bp|location=Sequence derived from alignment at P-fluviatile_contig14:2453295..2453807+ (Porterinema fluviatile SAG_2381)
GTACGGCTTCTTGGAGGTGAGTCAAGCGGCGCACTTTCGCTCAAGTGCAG
ATTAACATTCGGAGGGCAGGGGGCAAAACCCGCGTCGGACCGACTCTCTC
GAGCATGTATTTCGCAGTCCAGGCCAAGCGCCTCAGGCGGAGGTTGGGGT
TCGTTCCGTTCACACGCTGTGTCGAGGCGCGTCTTTCTTTGGGACGATGT
AATGCGTTCTTGGGTCGCAAGGAAGACGGCCAGCCTTGCTGTGTTCTCGC
TGTTTTTCTCTCAGGAGATGACGATTTCGGCCGTGTTGACGGATCCCCGG
GCGGCTCGGTCTGAACAGTAGGTACGGCTTCTTGGAGGTGAGTCAAGCGG
CGCACTTTCGCTCAAGTGCAGATTAACATTCGGAGGGCAGGGGGCAAAAC
CCGCGTCGGACCGACTCTCTCGAGCATGTATTTCGCAGTCCAGGCCAAGC
GCCTCAGGCGGAGGTTGGGGTTCGTTCCGTTCACACGCTGTGTCGAGGCG
CGTCTTTCTTTGGGACGATGTAATGCGTTCTTGGGTCGCAAGGAAGACGG
CCAGCCTTGCTGTGTTCTCGCTGTTTTTCTCTCAGGAGATGACGATTTCG
GCCGTGTTGACGGATCCCCGGGCGGCTCGGTCTGAACAGTAG
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