mRNA_P-fluviatile_contig14.2322.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2322.1 vs. uniprot
Match: D8LFA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA6_ECTSI) HSP 1 Score: 104 bits (260), Expect = 2.830e-22 Identity = 94/162 (58.02%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 499 LQVQLAGLQEKSLASRLAYERLQADKMSSDVRLRKAEEQKGLLAREAAAAKDKSXXXXXXXXXXXXXVRTLEGRLLELRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRQQVARMEAAVSVEKTSREEAEKGLERALSAKAKLERFLEGVLRVNEELVKG 984
+QVQ+AGLQEKSLASRLAYERLQADK +SD+R+RKAEEQK LARE A+AKDKSXXXXXXXXXXXXX K XXXXX X LR++VAR+EA+V E+GLERALSAK KLERFLEGVL+ + L G
Sbjct: 1 MQVQMAGLQEKSLASRLAYERLQADKAASDLRIRKAEEQKRQLARETASAKDKSXXXXXXXXXXXXXXXXXXXXXXXXGKEEEKSSSAEAKAXXXXXRTXRSKADQADVLREKVARVEASVRXXXXXXXXXEQGLERALSAKVKLERFLEGVLKESSNLGTG 162
BLAST of mRNA_P-fluviatile_contig14.2322.1 vs. uniprot
Match: A0A7R9YA16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA16_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.420e-12 Identity = 70/219 (31.96%), Postives = 107/219 (48.86%), Query Frame = 1
Query: 352 SAGSKAVLSALRALQDKIRKLESERDRASVEAGTLRRQIAALQTENDRTLQVQLAGLQEKSLASRLAYERLQADKMSSDVRLRKAEEQKGLLAREAAAAKDKSXXXXXXXXXXXXXVRTLEGRLLELRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRQQVARMEAAVSVEKTSREEAEKGLERALSAKAKLERFLEGVLRVNEELV----KGSGAG 996
S+GS+AVLSALRALQDKI++LE ER +A E L++Q+ + R+ +++ E+ ASRLA ER+ A+K ++RL KAEE K L +E A + + + ++G + EL L + ++E + EKT R E A++ K +L+ FL+GV+ +NE+LV KG AG
Sbjct: 225 SSGSRAVLSALRALQDKIKRLEGERSKALDEVNALKQQLEEAEASAKRSRELEKLTNSEQVHASRLANERVTAEKKVVEMRLSKAEEHKASLRKEIDALRKAASESEIARRTADGNLSVVQGHVRELEGELDDMKAQLAVAHEELAKERDERDQREIELGVVIQKIEEQLREEKTMRCE-------AVTEKERLDEFLKGVVAINEDLVRSIAKGDNAG 436
BLAST of mRNA_P-fluviatile_contig14.2322.1 vs. uniprot
Match: A0A836CEE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.880e-7 Identity = 77/218 (35.32%), Postives = 103/218 (47.25%), Query Frame = 1
Query: 328 AAATGWGASAGSKAVLSALRALQDKIRKLESERDRASVEAGTLRRQIAALQTENDRTLQVQLAGLQEKSLASRLAYERLQADKMSSDVRLRKAEEQKGLLAREAAAAKDKSXXXXXXXXXXXXXVRTLEGRLLELRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRQQVARMEAAVSVEKTSREEAEKGLERALSAKAKLERFLEGVLRVNEELVK 981
AA G+ S+ S+AVLSALR+LQ+KIR+LE++RD A EA R Q++ D+ + DV+L KAEE+K L RE AA ++ XXXX XXXXXXX ALR ++A+ EAA + E+ R AE LE +AKA+ + FL GVL+VNE LV+
Sbjct: 725 AAMGGFAGSSSSQAVLSALRSLQEKIRRLEADRDAALEEAADTRAQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAADDVKLSKAEEKKEALVREREAAHARAREAEAGRHAXXXXXXXXXXXXXXXXXXXXXXXXQQGSALRALAAQREDQVQAVEALRIRIAQAEAAAAAEQAERRGAEAQLEALRAAKAQSDTFLSGVLQVNEALVQ 942 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2322.1 >prot_P-fluviatile_contig14.2322.1 ID=prot_P-fluviatile_contig14.2322.1|Name=mRNA_P-fluviatile_contig14.2322.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=492bp MSSDVRLRKAEEQKGLLAREAAAAKDKSAAAEEAQRAAESRVRTLEGRLLback to top mRNA from alignment at P-fluviatile_contig14:2810500..2824282+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2322.1 ID=mRNA_P-fluviatile_contig14.2322.1|Name=mRNA_P-fluviatile_contig14.2322.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13783bp|location=Sequence derived from alignment at P-fluviatile_contig14:2810500..2824282+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2810500..2824282+ >mRNA_P-fluviatile_contig14.2322.1 ID=mRNA_P-fluviatile_contig14.2322.1|Name=mRNA_P-fluviatile_contig14.2322.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2952bp|location=Sequence derived from alignment at P-fluviatile_contig14:2810500..2824282+ (Porterinema fluviatile SAG_2381)back to top |