prot_P-fluviatile_contig14.2306.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2306.1
Unique Nameprot_P-fluviatile_contig14.2306.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length849
Homology
BLAST of mRNA_P-fluviatile_contig14.2306.1 vs. uniprot
Match: A0A6H5KXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR2_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 6.010e-40
Identity = 329/869 (37.86%), Postives = 386/869 (44.42%), Query Frame = 0
Query:   24 ADAAHVHVERLAAQRAFGSMDQNSGRVSARRLGELLTLLGTTAA-RIAHATESARAAGLLSAPSFSRQDFVDWYLSWSSIDSGSCGRTTATAAATATAEDVTAGDAQPPSPAYKPFRAATSD-----------------------------CCSSSSPSDPDSDDEFGDVSGYAGPFLS-EDELARLQNLRLSGGHPCGGSAHAAXXXXXXXXXXXXNPAAALRATAAALASRVNMANNENSD-PSNPRRGKPQSQARAPEERR-----GSGGGGLTADVAASDGVRRAGSGSRPL-ETGQGGGGAKALIN------AVSPPEFSAGGSSGAAATPQPRFQFGMQPSPQ--KGGSTRGVSSVHRAQGRGAXXXXXXXXXXXXXX-------NGGAAAGRGPRTGFS-----VKGIPAPTTPRSPADMMDVSESPLRPVFGSSDSPDFVFQAGQPARPPAYQQHSVSPXXXXXXMYTAT---------------HFPGALPAAAAAGPXXXXXPPAFAFGPAXXXXXXXXXPSPSRGRLFSLGSSPP---RAAAAPRARPAAVPPSRPSSFSFGACSD--PGAGEVPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSGVSGKSSRPSNTPPPPRRRRDWQGSSG--FGAEAQRGEAGAGRDAPPAPAVAPEATRPAAT--KSPLSTAGNFFAAIFSPRRKXXXXXXXXXXXXXXXAT-------ADA-FPAEPAATSGLASCLTDTSASPMAPAARNAPQSDEKSPSRGSTPAYRPLRDELLPPSLWSTPAGGRGGAXXXXXXX------EQSPLSPGS----------CSS---PTSNSPGSSVYFTPEG 783
            A +A V  ERLAA+RAF SMDQNSGRVSARRL ELLTLLG  AA R A ATESARAAGLLSAPSFS Q+FVDWYLSW   + G   R  A++  TA        D +PP   Y+PF     D                                ++ PSD      +GD     GP    E+ L RL      G           XXXXXXXXXXXX                           PS P+R KP+        R+     GSGGG        SD V    +GSRP  ETG+G   +   ++      A  PPE S+  ++ A ATP PRFQFG+ PS Q  +   +  +SS HRA GRGA                     +  AAAG+ PR G +              P SPA+MMDVSESPL PVFGSS+SP FVFQAGQP   P+        XXXXXX YTA                              XXXXX         XXXXXXXXX     GR F++GSS     R+ A P+ARPA  P SRP +F+FG   +  P  G   T                                               +      SR SNT       RDW GS G  FGA  Q G  G G              RPAAT  KSPL+TA +FFA++ SPR  XXXXXXXXXXXXXXX         ADA FP + A TS   +         +A A  N+   +       S P Y+PLR+ ++PP LW+ P  G GG    XXXX      EQSP S  S          C+S   P + SP SS YFTPEG
Sbjct:   38 AGSAEVLEERLAAERAFSSMDQNSGRVSARRLEELLTLLGMPAAQRGAKATESARAAGLLSAPSFSCQEFVDWYLSWLFKEEGPP-REGASSNGTA--------DGRPP--IYRPFPGTNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAPPSD------YGD-----GPLRGGEERLGRLSLASSDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCPQRSKPRXXXXXXVGRQSGGAVGSGGGD---GEHCSDHVVE--NGSRPTQETGEGTSSSTGEVSGATSSEATRPPESSS--AAAAPATPLPRFQFGV-PSLQGTRAPGSGALSSAHRAHGRGAPGRGVKSARAGSARGSSASVLSAAAAAGKAPRVGGAGXXXXXXXXXXXAAPSSPAEMMDVSESPLNPVFGSSNSPGFVFQAGQPRASPSQXXXXXXXXXXXXXAYTAMPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRFFNVGSSVTPLSRSTAMPQARPATPPQSRPPAFTFGGKPNGVPATGRQLTPAGSSLPGGGVTFSTGTVSNAGPGRRGQRGRP-------------TSASSLATPSRSSNTXXXXXGERDWHGSGGGGFGAVEQEGLKGVGAQDT---FTGETDQRPAATPLKSPLATATSFFASMLSPRXXXXXXXXXXXXXXXXXXXXXXHDDYADAAFPDQTATTSAAPAGXXXXXXXAVASAQENSADQE-------SAPGYQPLREHVVPPPLWTAPGRGDGGRGTGXXXXXXXFAPEQSPPSAASSPFSPMPSSYCASSFSPVTASPSSSAYFTPEG 853          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXR2_9PHAE6.010e-4037.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..849
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2694744..2697685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2306.1mRNA_P-fluviatile_contig14.2306.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 2694742..2697685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2306.1 ID=prot_P-fluviatile_contig14.2306.1|Name=mRNA_P-fluviatile_contig14.2306.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=849bp
AGDAPGATAAVAAAAIASSVPGAADAAHVHVERLAAQRAFGSMDQNSGRV
SARRLGELLTLLGTTAARIAHATESARAAGLLSAPSFSRQDFVDWYLSWS
SIDSGSCGRTTATAAATATAEDVTAGDAQPPSPAYKPFRAATSDCCSSSS
PSDPDSDDEFGDVSGYAGPFLSEDELARLQNLRLSGGHPCGGSAHAAAAA
AAAAISASTNPAAALRATAAALASRVNMANNENSDPSNPRRGKPQSQARA
PEERRGSGGGGLTADVAASDGVRRAGSGSRPLETGQGGGGAKALINAVSP
PEFSAGGSSGAAATPQPRFQFGMQPSPQKGGSTRGVSSVHRAQGRGAASR
GAKSKRASTGRNGGAAAGRGPRTGFSVKGIPAPTTPRSPADMMDVSESPL
RPVFGSSDSPDFVFQAGQPARPPAYQQHSVSPPPPPPPMYTATHFPGALP
AAAAAGPAAPSAPPAFAFGPAPVPVGVKPIPSPSRGRLFSLGSSPPRAAA
APRARPAAVPPSRPSSFSFGACSDPGAGEVPTAPTAASSAAAADAGTAAG
GGGTGATFATGTAPCTARSGRRGQRGRLLSGVSGKSSRPSNTPPPPRRRR
DWQGSSGFGAEAQRGEAGAGRDAPPAPAVAPEATRPAATKSPLSTAGNFF
AAIFSPRRKPAAGGGGGGGGGVAAATADAFPAEPAATSGLASCLTDTSAS
PMAPAARNAPQSDEKSPSRGSTPAYRPLRDELLPPSLWSTPAGGRGGASS
SAPPPEQSPLSPGSCSSPTSNSPGSSVYFTPEGRRASLAPQDAPAMAGGS
GRRGSVSKASAMGWSLPLGAKEDTSQGTEETKEVFQQEFQQHLRRQEQQ
back to top