prot_P-fluviatile_contig13.1977.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1977.1
Unique Nameprot_P-fluviatile_contig13.1977.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length120
Homology
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.600e-22
Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR GIDFFETFSPCP+VTSIRLL A+A  LGLDL H D +QAFVQSEL+E VY+RLP+ CG ++
Sbjct:   47 QREGIDFFETFSPCPSVTSIRLLAALACELGLDLCHFDTEQAFVQSELQECVYIRLPQGCGALS 110          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5JSS8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS8_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.090e-20
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    7 TNTQRTPTY--NLVDTYCRYHEQRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            TN +R   +  N V T+    E+R G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  471 TNAERKEFFGLNAVGTF----EEREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 552          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.160e-20
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    7 TNTQRTPTY--NLVDTYCRYHEQRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            TN +R   +  N V T+    E+R G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  577 TNAERKEFFGLNAVGTF----EEREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 658          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.570e-19
Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDITRSHSATPPGLRG 102
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++        GL G
Sbjct:  854 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRGLYG 929          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5KMK9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.250e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  179 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 242          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.850e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  377 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 440          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.860e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  364 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 427          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5K793_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K793_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.890e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RLP  CG ++
Sbjct:  577 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALS 640          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 6.840e-19
Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQS+L+EVV++RLP  CG ++
Sbjct:  127 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSDLDEVVFIRLPPGCGALS 190          
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Match: A0A6H5KM90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM90_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 8.300e-19
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 0
Query:   27 QRAGIDFFETFSPCPNVTSIRLLTAMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDIT 90
            QR G+DFFETFSPCP++TSIRLL A+A  L  DL H D +QAFVQSEL+EVV++RL   CG ++
Sbjct:  193 QREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLHPGCGALS 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG18_9PHAE2.600e-2271.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSS8_9PHAE6.090e-2055.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAQ1_9PHAE6.160e-2055.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV09_9PHAE1.570e-1959.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK9_9PHAE2.250e-1965.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K0K7_9PHAE2.850e-1965.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE2.860e-1965.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K793_9PHAE2.890e-1965.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE6.840e-1964.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KM90_9PHAE8.300e-1964.06Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..119
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 24..84
e-value: 7.9E-15
score: 55.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:3341009..3341368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1977.1mRNA_P-fluviatile_contig13.1977.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 3341009..3341368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1977.1 ID=prot_P-fluviatile_contig13.1977.1|Name=mRNA_P-fluviatile_contig13.1977.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp
VRNVHATNTQRTPTYNLVDTYCRYHEQRAGIDFFETFSPCPNVTSIRLLT
AMAASLGLDLFHLDVQQAFVQSELEEVVYVRLPRHCGDITRSHSATPPGL
RGRTSCRVPDFAAIQGATF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2